GENSCAN 1.0	Date run:  6-Nov-116	Time: 22:35:47

Sequence gi568815582f:154398_265153 : 110756 bp : 51.78% C+G : Isochore 3 (51 - 57 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   8764   8819   56  0  2   44  105   143 0.970  12.30
 1.02 Intr +  10085  10289  205  2  1   79   91   535 0.832  52.63
 1.03 Term +  10631  10759  129  1  0   77   53   193 0.999  13.19
 1.04 PlyA +  10839  10844    6                               1.05

 2.00 Prom +  11542  11581   40                              -5.21
 2.01 Init +  11601  11692   92  2  2   94   67   117 0.750  10.20
 2.02 Intr +  11871  12075  205  0  1   60   93   487 0.811  46.13
 2.03 Term +  12183  12311  129  2  0  106   52   234 0.991  20.09
 2.04 PlyA +  12347  12352    6                               1.05

 3.00 Prom +  16397  16436   40                              -7.20
 3.01 Init +  18516  18610   95  2  2  107   78   136 0.957  14.31
 3.02 Intr +  18728  18932  205  2  1  143  105   560 0.996  62.93
 3.03 Intr +  19075  19170   96  0  0  104   39   112 0.405   8.61
 3.04 Intr +  22302  22414  113  2  2   87   78   140 0.076  12.58
 3.05 Intr +  22532  22736  205  2  1  143  105   560 0.996  62.93
 3.06 Term +  22886  23014  129  1  0  114   43   154 0.996  11.99
 3.07 PlyA +  23104  23109    6                               1.05

 4.00 Prom +  24261  24300   40                              -7.20
 4.01 Init +  26090  26184   95  1  2   93   86   244 0.999  24.51
 4.02 Intr +  26269  26473  205  1  1  115   99   350 0.995  38.53
 4.03 Intr +  26583  26701  119  2  2   19   -8   160 0.034  -0.73
 4.04 Intr +  29972  30029   58  2  1  116   86    33 0.092   5.28
 4.05 Term +  31551  32897 1347  2  0   34   44   611 0.862  43.37
 4.06 PlyA +  34312  34317    6                               1.05

 5.11 PlyA -  34616  34611    6                               1.05
 5.10 Term -  34942  34801  142  0  1  106   46   107 0.848   6.01
 5.09 Intr -  35738  35571  168  1  0   59   32   156 0.013   6.68
 5.08 Intr -  36173  36144   30  1  0  132   92    -7 0.015   1.83
 5.07 Intr -  38618  38530   89  2  2   71   83    51 0.021   2.17
 5.06 Intr -  44841  44665  177  0  0  126   75   141 0.334  17.23
 5.05 Intr -  51750  51607  144  0  0  116   73   142 0.987  16.49
 5.04 Intr -  53791  53681  111  1  0   68   91   175 0.624  16.88
 5.03 Intr -  66350  66252   99  2  0  109   95   119 0.934  15.51
 5.02 Intr -  72939  72845   95  1  2   14   90    42 0.146  -2.82
 5.01 Init -  74942  74882   61  2  1   81  113   122 0.485  13.64
 5.00 Prom -  76678  76639   40                              -3.81

 6.02 PlyA -  78701  78696    6                               1.05
 6.01 Sngl -  80375  80028  348  2  0   74   55   162 0.757   5.95
 6.00 Prom -  80880  80841   40                              -4.01

 7.00 Prom +  89520  89559   40                              -3.71
 7.01 Init +  93530  93595   66  1  0   84   94    35 0.588   3.21
 7.02 Intr +  95152  95257  106  0  1   77   96    88 0.492   8.79
 7.03 Intr +  99991 100284  294  2  0  -41   93   191 0.018   4.23
 7.04 Intr + 105086 105202  117  0  0   67   86   148 0.996  13.44
 7.05 Intr + 105599 105763  165  0  0  104   96   144 0.803  17.25
 7.06 Intr + 106987 107117  131  2  2   65   73   231 0.750  20.22
 7.07 Intr + 107696 107828  133  1  1  117   88   111 0.905  14.72
 7.08 Intr + 108027 108156  130  1  1   63   94   178 0.999  16.16
 7.09 Intr + 108865 109005  141  1  0   97   77   215 0.993  21.28
 7.10 Intr + 109303 109378   76  1  1   81   79   119 0.999  10.31
 7.11 Intr + 109619 109774  156  1  0  104   76   105 0.978  11.62
 7.12 Intr + 110217 110319  103  2  1   71  113    94 0.991  10.45
 7.13 Intr + 110414 110614  201  0  0   82   42   194 0.585  13.98

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  22320  22414   95  2  2  107   78   136 0.911  14.31
S.002 Term +  26583  26711  129  2  0   19   43   220 0.936   9.09
S.003 Intr -  35738  35534  205  0  1   59   38   186 0.821   9.48
S.004 Sngl +  76737  77075  339  2  0   70   28   231 0.992  11.74
S.005 Init + 100017 100284  268  2  1   59   93   181 0.978  12.84


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582f:154398_265153|GENSCAN_predicted_peptide_1|129_aa
MWAKISTQADTIGTETLERLFLSHPQTKTYFPHFDLHPGSAQLRAHGSKVVAAVGDAVKS
IDDIGGALSKLSELHAYILRVDPVNFKLLSHCLLVTLAARFPADFTAEAHAAWAKFLSVV
SSVLTEKYR

>gi568815582f:154398_265153|GENSCAN_predicted_CDS_1|390_bp
atgtgggccaagatctccacgcaggccgacaccatcggcaccgagactctggagaggctc
ttcctcagccacccgcagaccaagacctacttcccgcacttcgacctgcacccggggtcc
gcgcagttgcgcgcgcacggctccaaggtggtggccgccgtgggcgacgcggtgaagagc
atcgacgacatcggcggcgccctgtccaagctgagcgagctgcacgcctacatcctgcgc
gtggacccggtcaacttcaagctcctgtcccactgcctgctggtcaccctggccgcgcgc
ttccccgccgacttcacggccgaggcccacgccgcctgggccaagttcctatcggtcgta
tcctctgtcctgaccgagaagtaccgctga

>gi568815582f:154398_265153|GENSCAN_predicted_peptide_2|141_aa
MLSAQERAQIAQVWDLIAGHEAQFGAELLLRLFTVYPSTKVYFPHLSACQDATQLLSHGQ
RMLAAVGAAVQHVDNLRAALSPLADLHALVLRVDPANFPLLIQCFHVVLASHLQDEFTVQ
MQAAWDKFLTGVAVVLTEKYR

>gi568815582f:154398_265153|GENSCAN_predicted_CDS_2|426_bp
atgctcagcgcccaggagcgcgcccaaatcgcgcaggtctgggacctgattgcgggccac
gaggcgcaattcggggcggagctgctgctcaggctcttcacggtgtaccccagcaccaag
gtctacttcccgcacctgagcgcctgccaggacgcgacgcagctgctgagccacgggcag
cgcatgctggcggctgtgggcgcggcggtgcagcacgtggacaacctgcgcgccgcgctg
agcccgctggcggacctgcacgcgctcgtgctgcgcgtggacccagccaactttccgctg
ctaatccagtgtttccacgtcgtgctggcctcccacctgcaggacgagttcaccgtgcaa
atgcaagcggcgtgggacaagttcctgactggtgtggccgtggtgctgaccgaaaaatac
cgctga

>gi568815582f:154398_265153|GENSCAN_predicted_peptide_3|280_aa
MVLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSHGSAQVKGHG
KKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLLSHCLLVTLAAHLPAEFTP
AVHASLDKFLASTQREPTMVLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKT
YFPHFDLSHGSAQVKGHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKLL
SHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR

>gi568815582f:154398_265153|GENSCAN_predicted_CDS_3|843_bp
atggtgctgtctcctgccgacaagaccaacgtcaaggccgcctggggtaaggtcggcgcg
cacgctggcgagtatggtgcggaggccctggagaggatgttcctgtccttccccaccacc
aagacctacttcccgcacttcgacctgagccacggctctgcccaggttaagggccacggc
aagaaggtggccgacgcgctgaccaacgccgtggcgcacgtggacgacatgcccaacgcg
ctgtccgccctgagcgacctgcacgcgcacaagcttcgggtggacccggtcaacttcaag
ctcctaagccactgcctgctggtgaccctggccgcccacctccccgccgagttcacccct
gcggtgcacgcctccctggacaagttcctggcttctactcagagagaacccaccatggtg
ctgtctcctgccgacaagaccaacgtcaaggccgcctggggtaaggtcggcgcgcacgct
ggcgagtatggtgcggaggccctggagaggatgttcctgtccttccccaccaccaagacc
tacttcccgcacttcgacctgagccacggctctgcccaggttaagggccacggcaagaag
gtggccgacgcgctgaccaacgccgtggcgcacgtggacgacatgcccaacgcgctgtcc
gccctgagcgacctgcacgcgcacaagcttcgggtggacccggtcaacttcaagctccta
agccactgcctgctggtgaccctggccgcccacctccccgccgagttcacccctgcggtg
cacgcctccctggacaagttcctggcttctgtgagcaccgtgctgacctccaaataccgt
taa

>gi568815582f:154398_265153|GENSCAN_predicted_peptide_4|607_aa
MALSAEDRALVRALWKKLGSNVGVYTTEALERTFLAFPATKTYFSHLDLSPGSSQVRAHG
QKVADALSLAVERLDDLPHALSALSHLHACQLRVDPASFQLLGHCLLVTLARHYPGDFSP
ALQASLDKFLSHVISALVSETTLNPLRASVKAHALPKPKKTKRKAHVLNKYPESHLQEKV
QVRNTDTGGIRTRREQRHGGNSDTGGTATRGEQRHGGNSDTGGTATRGEQRHGGNSDTGG
TATRGEQRHGGNSDTGGTATRGEQRHGGNSDTGGTATRGEQRHGGNSDTGGTATRGEQRH
GGNSDTGGTATRGEQRHGGNSDTGGTATRGEQRHGGNSDTGGTATRGEQRHGGNSDTGGT
ATRGEQRHGGNSDTGGTATRGEQRHGGNSDTGGTATRGEQRHGGNSDTGGTATRGEQRHG
GNSDTGGTATRGEQRHGGNSDTGGTATRGEQRHGGNSDTGGTATRGEQRHGGNSDTGGTA
TRGEQRHGGNSDTGGTATRGEQRHGGNSDTGGTATRGEQRHGGNSDTGGTATRGEQRHGG
NSDTGGTATRGEQRHGGNSDTGGTATRGEQRHGGNSDTGGTATRGEQRHGGNTNTGGTAT
RREYRHG

>gi568815582f:154398_265153|GENSCAN_predicted_CDS_4|1824_bp
atggcgctgtccgcggaggaccgggcgctggtgcgcgccctgtggaagaagctgggcagc
aacgtcggcgtctacacgacagaggccctggaaaggaccttcctggctttccccgccacg
aagacctacttctcccacctggacctgagccccggctcctcacaagtcagagcccacggc
cagaaggtggcggacgcgctgagcctcgccgtggagcgcctggacgacctaccccacgcg
ctgtccgcgctgagccacctgcacgcgtgccagctgcgagtggacccggccagcttccag
ctcctgggccactgcctgctggtaaccctcgcccggcactaccccggagacttcagcccc
gcgctgcaggcgtcgctggacaagttcctgagccacgttatctcggcgctggtttccgag
actacccttaacccactcagggcttcggtcaaggcccatgcgctccccaagcccaagaag
acgaagaggaaagcacatgtgctgaacaagtaccctgagtcccacctgcaggaaaaggtg
caggtaaggaatacggacacgggaggaatacggacacggagggaacagcgacacgggggg
aacagcgacacggggggaacagcgacacggggggaacagcgacacggggggaacagcgac
acggggggaacagcgacacggggggaacagcgacacggggggaacagcgacacgggggga
acagcgacacggggggaacagcgacacggggggaacagcgacacggggggaacagcgaca
cggggggaacagcgacacggggggaacagcgacacggggggaacagcgacacggggggaa
cagcgacacggggggaacagcgacacggggggaacagcgacacggggggaacagcgacac
ggggggaacagcgacacggggggaacagcgacacggggggaacagcgacacggggggaac
agcgacacggggggaacagcgacacggggggaacagcgacacggggggaacagcgacacg
gggggaacagcgacacggggggaacagcgacacggggggaacagcgacacggggggaaca
gcgacacggggggaacagcgacacggggggaacagcgacacggggggaacagcgacacgg
ggggaacagcgacacggggggaacagcgacacggggggaacagcgacacggggggaacag
cgacacggggggaacagcgacacggggggaacagcgacacggggggaacagcgacacggg
gggaacagcgacacggggggaacagcgacacggggggaacagcgacacggggggaacagc
gacacggggggaacagcgacacggggggaacagcgacacggggggaacagcgacacgggg
ggaacagcgacacggggggaacagcgacacggggggaacagcgacacggggggaacagcg
acacggggggaacagcgacacggggggaacagcgacacggggggaacagcgacacggggg
gaacagcgacacggggggaacagcgacacggggggaacagcgacacggggggaacagcga
cacggggggaacagcgacacggggggaacagcgacacggggggaacagcgacacgggggg
aacagcgacacggggggaacagcgacacggggggaacagcgacacggggggaacagcgac
acggggggaacagcgacacggggggaacagcgacacggggggaacagcgacacgggggga
acagcgacacggggggaacagcgacacggggggaataccaacacgggaggaacagcaaca
cgcagggaatatcgacatgggtga

>gi568815582f:154398_265153|GENSCAN_predicted_peptide_5|371_aa
MSAQAQMRALLDQLMGTARDGDETRQRVKFTDDRVCKSHLLDCCPHDILAGTRMDLGECT
KIHDLALRADYEIASKERDLFFELDAMDHLESFIAECDRRTELAKKRLAETQEEISAEVS
AKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKILMEVEKVRAKKKEAEEEYRNSMPAS
SFQQQKLRVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRN
QDRLRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRSRSRDRHR
RHRSRSRSHSRGHRRASRDRSAKYKFSRERASREESWESGRSERGPPDWRLESSNGKMAS
RRSEEKEAGEI

>gi568815582f:154398_265153|GENSCAN_predicted_CDS_5|1116_bp
atgtccgcccaggcgcagatgcgggccctgctggaccagctcatgggcacggctcgggac
ggagacgaaaccagacagagggtcaagtttacagatgaccgtgtctgcaagagtcacctt
ctggactgctgcccccatgacatcctggctgggacgcgcatggatttaggagaatgtacc
aaaatccacgacttggccctccgagcagattatgagattgcaagtaaagaaagagacctg
ttttttgaattagatgcaatggatcacttggagtcctttattgctgaatgtgatcggaga
actgagctcgccaagaagcggctggcagaaacacaggaggaaatcagtgcggaagtttct
gcaaaggcagaaaaagtacatgagttaaatgaagaaataggaaaactccttgctaaagcc
gaacagctaggggctgaaggtaatgtggatgaatcccagaagattcttatggaagtggaa
aaagttcgtgcgaagaaaaaagaagctgaggaagaatacagaaattccatgcctgcatcc
agttttcagcagcaaaagctgcgtgtctgcgaggtctgttcagcctaccttggtctccat
gacaatgaccgtcgcctggcagaccacttcggtggcaagttacacttggggttcattcag
atccgagagaagcttgatcagttgaggaaaactgtcgctgaaaagcaggagaagagaaat
caggatcgcttgaggaggagagaggagagggaacgggaggagcgtctgagcaggaggtcg
ggatcaagaaccagagatcgcaggaggtcacgctcccgggatcggcgtcggaggcggtca
agatctacctcccgagagcgacggaaattgtcccggtcccggtcccgagatagacatcgg
cgccaccgcagccgttcccggagccacagccggggacatcgtcgggcttcccgggaccga
agtgcgaaatacaagttctccagagagcgggcatccagagaggagtcctgggagagcggg
cggagcgagcgagggcccccggactggaggcttgagagctccaacgggaagatggcttca
cggaggtcagaagagaaggaggccggcgagatctga

>gi568815582f:154398_265153|GENSCAN_predicted_peptide_6|115_aa
MRRLRPRPTAMLRLLGNGDLGRCLRREPGGVLFVAVAMDAERPRPSSFPSPLRPRSSPSS
FPSFSASSLPSSSSPDLVLFPPSFLTSTPDLRPRPRFRVLSPVFLLFDHEENCWH

>gi568815582f:154398_265153|GENSCAN_predicted_CDS_6|348_bp
atgcgcaggctccgaccccgccccaccgccatgcttcggttgctcggcaacggggatctt
gggcgctgcctccgccgggaacctggcggtgtcctgtttgtcgctgtcgcaatggatgct
gaacgtcctcgcccctcttcgttcccgtcccccctccgtcctcgctcctctccgtcctct
ttcccctccttctctgcgtcctcgctcccctcctcctcctctcccgaccttgtcctcttc
ccgccttctttcttgacgtcgacccccgatctgcgtcctcgcccccgcttccgggtgctc
tccccagtgtttctcctctttgaccacgaggagaattgctggcactga

>gi568815582f:154398_265153|GENSCAN_predicted_peptide_7|607_aa
MEALRGLTVWEPSQSGAQCWVQVHLGLRRHRFPVHSSRPDAPAGVHIEDVLRALPRPGVK
LWDVPVMLDHKDLEAEIHPLKNEERKSQENLGNPSKNEDNVKSAPPQSRLSRCRAAAFFL
SLFLCLFVVFVVSFVIPCPDRPASQRMWRIDYSAAVIYDFLAVDDINGDRIQDVLFLYKN
TNSSNNFSRSCVDEAAVSGANGSTLWERPVAQDVALVECAVPQPRGSEAPSACILVGRPS
SFIAVNLFTGETLWNHSSSFSGNASILSPLLQVPDVDGDGAPDLLVLTQEREEVSGHLYS
GSTGHQIGLRGSLGVDGESGFLLHVTRTGAHYILFPCASSLCGCSVKGLYEKVTGSGGPF
KSDPHWESMLNATTRRMLSHSSGAVRYLMHVPGNAGADVLLVGSEAFVLLDGQELTPRWT
PKAAHVLRKPIFGRYKPDTLAVAVENGTGTDRQILFLDLGTGAVLCSLALPSLPGGPLSA
SLPTADHRSAFFFWGLHELGSTSETETGEARHSLYMFHPTLPRVLLELANVSTHIVAFDA
VLFEPSRHAAYILLTGPADSEAPGLVSVIKHKVRDLVPSSRVVRLGEGGPDSDQAIRDRF
SRLRYQX

>gi568815582f:154398_265153|GENSCAN_predicted_CDS_7|1821_bp
atggaggcactgcggggcctgactgtctgggaaccctctcagagtggagcccagtgctgg
gttcaggtccacctgggcttgcgaaggcacagattccccgtccacagctcacgaccagat
gcaccagcaggagtccacatcgaggacgtcctccgggcactcccacgaccaggagttaaa
ctttgggatgtgcccgtgatgttggaccacaaggacttagaggccgaaatccaccccttg
aaaaatgaagaaagaaaatcgcaggaaaatctgggaaatccatcaaaaaatgaggataac
gtgaaaagcgcgcctccacagtcccggctctcccggtgccgagcggcggcgttttttctt
tcattgtttctctgcctttttgtggtgttcgtcgtctcattcgtcatcccgtgtccagac
cggccggcgtcacagcgaatgtggaggatagactacagtgccgctgttatctatgacttt
ctggctgtggatgatataaacggggacaggatccaagatgttctttttctttataaaaac
accaacagcagcaacaatttcagccgatcctgtgtggacgaagctgctgtgtcgggggcc
aacggcagcacgctctgggagagacctgtggcccaagacgtggccctcgtggagtgtgct
gtgccccagccaagaggcagtgaggcaccttctgcctgcatcctggtgggcagacccagt
tctttcattgcagtcaacttgttcacaggggaaaccctgtggaaccacagcagcagcttc
agcgggaatgcgtccatcctgagccctctgctgcaggtgcctgatgtggacggcgatggg
gccccagacctgctggttctcacccaggagcgggaggaggttagtggccacctctactcc
ggcagcaccgggcaccagattggcctcagaggcagccttggtgtggacggggaaagtggc
ttcctccttcacgtcaccaggacaggtgcccactacatcctctttccctgcgcaagctcc
ctctgcggctgctctgtgaagggtctctacgagaaggtgaccgggagcggcggcccgttc
aagagtgacccgcactgggagagcatgctcaatgccaccacccgcaggatgctttcccac
agctctggagcagtgcgctacctgatgcatgtcccagggaacgccggtgcagatgtgctt
cttgtgggctcagaggccttcgtgctgctggacgggcaggagctgacgcctcgctggaca
cccaaggcagcccatgtcctgagaaaacccatcttcggccgctacaaaccagacaccttg
gctgtagccgttgaaaacggaactggcaccgacagacagatcctgtttctggaccttggc
actggagccgtcctgtgtagcctagccctcccgagcctccctgggggtccactgtccgcc
agcctgccgaccgcagaccaccgctcagccttcttcttctggggcctccacgagctgggg
agcaccagcgagacggagaccggggaggcccggcacagcctgtacatgttccaccccacc
ctgccgcgcgtgctgctggagctggccaatgtctctacccacattgtcgcctttgacgcc
gtcctgtttgagccaagccgccacgccgcctacatccttctgacaggcccggcagactca
gaggcacccggcctggtctctgtgatcaagcacaaggtgcgggaccttgtcccaagcagc
agggtggtccgcctgggtgagggtgggccagacagtgaccaagccatcagggaccggttc
tcccggctgcggtaccagann