GENSCAN 1.0	Date run:  4-Aug-121	Time: 20:33:11

Sequence gi568815582f:10643960_10869102 : 225143 bp : 46.49% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +  12098  12249  152  0  2   43   44   132 0.236   2.37
 1.02 PlyA +  12685  12690    6                               1.05

 2.09 PlyA -  12954  12949    6                               1.05
 2.08 Term -  15192  15136   57  0  0   83   40    53 0.176  -2.31
 2.07 Intr -  18772  18523  250  0  1   46   89    75 0.209   0.84
 2.06 Intr -  23620  23517  104  1  2    4   92   119 0.071   2.87
 2.05 Intr -  32222  32000  223  1  1  127  105   386 0.998  42.33
 2.04 Intr -  38177  38034  144  1  0   76  113   197 0.990  20.40
 2.03 Intr -  45364  45294   71  1  2   98   91    -5 0.917  -1.22
 2.02 Intr -  46066  45983   84  1  0   82   90   102 0.972   9.82
 2.01 Init -  50914  50351  564  1  0   85  109   790 0.992  75.84
 2.00 Prom -  54589  54550   40                              -5.76

 3.00 Prom +  58174  58213   40                              -8.76
 3.01 Init +  63821  63891   71  1  2   40   64    95 0.713   2.82
 3.02 Intr +  63966  64097  132  0  0   50   68   107 0.538   4.66
 3.03 Intr +  67985  68149  165  2  0   44  103   127 0.274   8.88
 3.04 Intr +  72985  73078   94  1  1   23   46   130 0.116   2.27
 3.05 Term +  73487  73612  126  1  0   62   45    81 0.408  -0.52
 3.06 PlyA +  75211  75216    6                               1.05

 4.00 Prom +  79377  79416   40                              -2.36
 4.01 Init +  98308  98324   17  0  2   72  127    35 0.719   5.49
 4.02 Intr +  99796  99923  128  1  2   25  115    95 0.979   6.22
 4.03 Intr + 100002 100106  105  1  0   94   80    44 0.942   4.39
 4.04 Intr + 103184 103317  134  0  2  116   94    86 0.997  12.36
 4.05 Intr + 108651 108719   69  2  0  115   90    34 0.960   5.68
 4.06 Intr + 112731 112821   91  2  1   93   14    99 0.982   2.57
 4.07 Intr + 113914 114068  155  2  2   60   99   258 0.979  23.89
 4.08 Intr + 117405 117515  111  2  0   71  100   176 0.856  17.68
 4.09 Intr + 117798 117900  103  2  1   79   80    24 0.539   0.45
 4.10 Intr + 123990 124073   84  1  0  105   89     5 0.088   2.09
 4.11 Term + 125088 125146   59  1  2  110   47    23 0.090  -1.75
 4.12 PlyA + 125372 125377    6                               1.05

 5.12 PlyA - 125826 125821    6                              -0.45
 5.11 Term - 127669 127622   48  1  0   89   38    48 0.508  -2.80
 5.10 Intr - 127839 127711  129  0  0   34  113   109 0.841   8.89
 5.09 Intr - 129482 129354  129  2  0   94   95   -19 0.462   0.29
 5.08 Intr - 130169 130080   90  2  0   86   61    82 0.944   5.49
 5.07 Intr - 131137 130993  145  0  1   52  100   210 0.760  18.88
 5.06 Intr - 174223 174144   80  1  2  120   89   188 0.994  20.45
 5.05 Intr - 182013 181903  111  0  0   65   62    73 0.334   2.98
 5.04 Intr - 185122 185110   13  0  1   93  105     0 0.047  -3.02
 5.03 Intr - 190560 190424  137  0  2   56  110    58 0.161   4.17
 5.02 Intr - 197187 196518  670  2  1   94   66   263 0.627  16.41
 5.01 Init - 204133 204102   32  1  2   93   98    40 0.916   4.71
 5.00 Prom - 211468 211429   40                              -3.86

 6.03 PlyA - 212901 212896    6                               1.05
 6.02 Term - 215731 215087  645  1  0   37   54  1739 0.923 159.53
 6.01 Init - 215936 215883   54  2  0   42    7    93 0.710  -4.09
 6.00 Prom - 217990 217951   40                              -3.16

 7.00 Prom + 219819 219858   40                              -4.06
 7.01 Init + 222268 222613  346  0  1   36  103   293 0.613  20.98

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582f:10643960_10869102|GENSCAN_predicted_peptide_1|50_aa
XSLIKFVEETVLCIEGCLVSSLPGLYPLDASSTHFQCDNQNYLQTLPTTP

>gi568815582f:10643960_10869102|GENSCAN_predicted_CDS_1|153_bp
nactctttgataaaatttgtggaggagaccgtcctgtgcattgaaggatgtttagttagc
agcctccctggtctctacccactagatgccagtagcacccacttccagtgtgacaaccaa
aattatctccagacgttgccaactaccccctag

>gi568815582f:10643960_10869102|GENSCAN_predicted_peptide_2|498_aa
MEFLGTTQTASYCGPKKCCGLTSLPAVQAPVIQECYQPYYLPGYRYLNSWRPSLFYKIAN
VQTCPDESTSTLRPPTILPTLRSALFSRYSPHDWDQSNQLQVRGAEASRLWASRLTDDSM
RLLQDKDQLTHQMQEGTCRNLGQRLSDIGFWKSELSYELDRLLTENQNLETVKRRLECAA
NEVNCPLQVALECLYHREKRIGIDLVHDNVEKNLIREVDLLKCCQEQMRKLAQRIDIQMR
DNRDAQHVLERDLEDKSSAQCIDEKCFNLRNTSDCISFFHGMEKIDGTISVPETWAKFSN
DNIKHSQNMRANSIQLREEAEHLFETLSDQMWRQFTDTNLAFNARISEVTDVKNKLQTQL
AKPPEPEWIQSNPKAATWSDDIYRQKKESDAQKTEVRWSCHGCNWLGPVLWMVKEFAKIV
MGKERQMYWRKYKDTLQESNGQHSTEGAACKEAGAGRKFYRVVVPGLRAEQSIWEQNAVQ
GIFRNVVVTACGVDATGI

>gi568815582f:10643960_10869102|GENSCAN_predicted_CDS_2|1497_bp
atggagtttcttgggactactcagaccgccagttactgtggtcccaagaaatgctgtggc
ttgacctcactgccagctgtacaggcgccagtgatccaggaatgctatcagccctactac
ctgcccgggtaccgctacctcaattcatggaggcctagcctcttctacaagatagccaac
gtccagacctgcccggacgagagcaccagtaccctgcggccgcccaccatcctgcccaca
ctgcgctccgcactcttctctcgctatagcccccacgactgggaccagtccaaccagctg
caggtgcgtggggccgaggcctcccggctgtgggccagccggctgacggatgactccatg
aggctcttgcaggacaaggaccagctgacgcaccagatgcaggagggcacctgccggaac
ctgggccagaggctgtcggacattggcttctggaagtcagagctgagctatgagctggac
aggcttctgactgagaaccagaacttggagacggtcaagaggcggctggagtgcgcggcc
aatgaggtgaactgcccattgcaggtggccttggagtgtctgtaccatcgagagaagagg
attgggattgatttggtccatgacaacgtggagaaaaaccttatccgggaagtggatttg
ctaaaatgttgccaagaacagatgagaaaattagctcaaagaattgatatccagatgcgg
gataaccgggatgctcagcacgtgctggagagggacctcgaagacaaaagctcggcccag
tgtatcgatgagaagtgctttaacctgagaaatacgtcagactgcatcagcttcttccac
ggcatggagaaaattgacggcacgatctccgtacctgagacctgggccaagttcagtaac
gacaacatcaaacactctcagaacatgcgggccaactccatccagctgcgggaggaggcg
gagcacctctttgagaccttgtcggatcagatgtggaggcagttcacagacaccaacctg
gccttcaacgcccgcatctctgaggtgacggatgtgaagaataagctgcagacgcagctg
gcgaagccccctgaaccagaatggattcagagcaaccccaaagctgccacgtggtcggat
gatatttacagacagaaaaaggaaagtgatgcacagaagacggaagtcaggtggtcctgt
catgggtgcaactggctggggccagtgctgtggatggtaaaagaatttgccaagatagtc
atgggtaaagaaaggcagatgtattggagaaagtacaaggatacgttgcaagaaagcaat
gggcagcacagcacagaaggggctgcctgcaaagaggcaggagctggaaggaagttttat
agggtggtggtgccggggctacgtgcagaacaaagtatttgggaacagaatgctgtgcaa
gggatatttcgcaatgtggttgtcacagcttgcggggtggatgctactggcatttag

>gi568815582f:10643960_10869102|GENSCAN_predicted_peptide_3|195_aa
MGSNIILSTPGYYEQYHMKVYTMSDMESNSIVSHPGYYEQHHKKVYTPRYTGSKYHLPAS
VCDEPYRRTNITEGVYIPCNTVSNNILSLPGYSEQYQGKVYALCDIVSNIILFLPEYYEQ
YYRGLYTYCDMESNIILFLPEYYGQYCEGGTTPMGVYIPCDIRSNITLFPPGYYEPYHGE
LYKPSIGKVISPYPP

>gi568815582f:10643960_10869102|GENSCAN_predicted_CDS_3|588_bp
atgggtagcaacatcatcctctccacccctggatattatgaacaatatcatatgaaggtg
tacaccatgagcgatatggagagcaatagtatcgtctctcatcctggatattacgaacaa
catcataaaaaagtgtacaccccccgctatacgggtagtaaataccacctccccgcttct
gtatgtgatgaaccctatcgcaggaccaatatcacagaaggggtgtacatcccctgcaat
actgtgagtaataacatcctctccctccctggatattcggaacaatatcaagggaaggtg
tacgctctctgcgatattgtaagtaacatcatcctctttctccctgaatattatgaacaa
tattacaggggactgtacacctactgcgatatggagagtaacatcatcctcttccttcct
gaatattacggacaatattgcgaggggggtacaacccctatgggggtgtacatcccgtgc
gatataaggagtaatattacactctttcctcctggatattacgaaccatatcatggggaa
ttgtacaagccctccatagggaaagtaatatcaccctatcccccttag

>gi568815582f:10643960_10869102|GENSCAN_predicted_peptide_4|351_aa
MTAAKRPLSETYFARSENQIVPTRRKCTTAGSGDHEGGKGDGMEEVPHDCPGADSAQAGR
GASCQGCPNQRLCASGAGATPDTAIEEIKEKMKTVKHKILVLSGKGGVGKSTFSAHLAHG
LAEDENTQIALLDIDICGPSIPKIMGLEGEQYVEDNLGVMSVGFLLSSPDDAVIWRGPKK
NGMIKQFLRDVDWGEVDYLIVDTPPGTSDEHLSVVRYLATAHIDGAVIITTPQEVSLQDV
RKEINFCRKVKLPIIGVVENMSGFICPKCKKESQIFPPTTGGAELMCQDLEVPLLGRVPL
DPLIGKNCDKGQSFFIDAPDSPATLAYRSIIQRIQEFCNLHQSKEENLISS

>gi568815582f:10643960_10869102|GENSCAN_predicted_CDS_4|1056_bp
atgacagctgccaaacgccccctttccgagacttatttcgcgcggtcggagaatcagatt
gtgcccacaaggcggaaatgtacgacagcgggttccggtgaccacgaaggcggcaaaggc
gacggaatggaggaggtgcctcacgactgtccaggggccgacagcgcccaggcgggcaga
ggggcttcatgtcagggatgccccaaccagcggctgtgcgcttctggagcgggggccact
ccggacacggctatagaggaaatcaaagagaaaatgaagactgtaaaacacaaaatcttg
gtattgtctgggaaaggcggtgttgggaaaagcacattcagcgcccaccttgcccatggc
ctagcagaggatgaaaacacacagattgctcttctagacatcgatatatgtgggccatcg
attcccaagataatgggattggaaggagagcagtacgtggaagacaacctgggggtgatg
tcagtgggcttcctgctcagcagtcctgatgatgctgttatctggaggggacccaagaaa
aacggcatgatcaagcagttcctccgagatgtggactggggagaggtcgactacctcatt
gtggacaccccacctgggacgtcggatgaacacctctcggtcgtccggtacctggccaca
gcacacatcgatggagcagtgatcatcaccactccccaggaggtgtcactccaggatgtc
cggaaagaaatcaacttctgccgcaaggtgaagctgcccatcatcggggtggtggagaac
atgagtggcttcatctgtcctaagtgcaagaaagaatctcagatattccctcccacaacc
gggggcgcggagctcatgtgccaggacttggaggtccctctcctcggcagagtgcccctg
gatccgctcataggtaagaattgtgacaaaggccagtcttttttcattgacgccccagat
tccccagccacgttagcctacagaagtataattcagagaatccaagagttttgtaatctc
catcagtcaaaagaagagaacctcatcagttcctga

>gi568815582f:10643960_10869102|GENSCAN_predicted_peptide_5|527_aa
MVYETPVPSTQKKSARFKSDSGSLGDAKNEKETPSLTKVFDVMKKGKSTVSLLTPTRGGS
EKQESTWKTKKADQLKLRPRAPADDVFGVGNHKANAATAKRKSTRRRHTLGGHRDATEIS
VWNFWKAHERSWERESELSAVSRLKPKCSAQDVSISDWLARNCLHTSTSDLSSGESGDPQ
AENPRTREIATTDTPLACQYDTGSSSSTLASTNRPLLSIPPQSPDQINGESFQNKVTSEL
PPEGHGRAGRVMSMPGHVEGMPGKGDGEGIVPKACGECSSGAFPKVGLKRVSNQQLISLA
KSCVHVHTSVLGTAGVRICTQALVDDTEDVSLDFGNEEELAFRKAKIRHPLATFFHLFFR
VSAIVTYVSCDWFSKSFVGCFVMVLLLLSLDFWSVKNVTGRLLVGLRWWNQIDEDGKSHW
IFEARKVSPNSIAATEAEARIFWLGLIICPMIWIVFFFSTLFSLKLKWLALVVAGISLQA
ANLYGYILCKMGGNSDIGKVTASFLSQTVFQTVVKVKVACWQLRFVM

>gi568815582f:10643960_10869102|GENSCAN_predicted_CDS_5|1584_bp
atggtctatgaaacaccagtgcccagtacacagaaaaaatcagcgagattcaagtcagac
agtggaagtctaggagatgccaagaacgagaaagaaacaccttcattaactaaagtgttt
gatgttatgaaaaaaggaaagtcaactgtgagtttactgacacccaccagaggtggatcc
gaaaaacaggaatccacatggaaaacgaaaaaagcagatcagctaaaactgagacccaga
gcccctgcggatgacgtgtttggagtagggaatcacaaagcgaatgccgcgactgctaaa
aggaaaagcacccggcgcagacatacgctaggagggcacagagatgctactgaaatcagc
gtttggaatttttggaaagcgcatgagcggagttgggagagagaatctgaactttcagct
gtaagccggttaaaaccaaaatgctcagcccaggacgtttccatctcagactggctggcc
aggaattgcctacacactagtacctctgaccttagcagcggagaaagcggagatccccag
gcagagaacccaaggacacgagaaatagccacgaccgacacacctttggcttgtcagtac
gacacaggcagttcttccagcaccttggcttcaacaaacaggccccttctttccatacca
ccgcagtcacctgaccaaataaacggagaaagcttccagaacaaagtgacctctgagctg
ccacctgaaggacatggaagagctggccgtgtgatgagcatgccagggcatgtggagggc
atgccaggcaagggtgatggcgagggcatagtccccaaagcgtgtggagagtgttccagt
ggagcatttcccaaagttggcctaaagagggtcagcaatcagcagcttatatctcttgct
aagagctgcgtccatgtccacaccagcgtgctgggcacagctggtgtcaggatttgcacc
caggccctggtggacgataccgaggatgtgtccctggactttggaaacgaggaggagctg
gcctttaggaaagccaagatcagacaccccttggccacctttttccacctgtttttccga
gtgagtgccatcgtcacctacgtgagctgcgactggttcagcaagagctttgtgggctgt
tttgtcatggtgctgctcctcctgtccctggacttctggtctgtgaagaatgtaaccgga
agactcctggtgggccttcgatggtggaaccagatagatgaagatgggaagagccactgg
atctttgaagccaggaaggtctctccgaatagcattgctgccacagaagctgaagcacga
atcttctggctgggcctcataatctgccccatgatatggattgtgtttttttttagcacc
ttattttccttgaagctaaagtggctggctctggtggttgctgggatctctctccaagct
gcaaacctgtatggctacatcctttgtaagatgggaggcaacagtgacattggcaaggtc
acagccagtttcctgtcccagacagtgttccagacggtagtcaaagtcaaggtggcctgc
tggcaactgcggtttgtaatgtaa

>gi568815582f:10643960_10869102|GENSCAN_predicted_peptide_6|232_aa
MGTSRLAPVAAACLPTDQDDITTSVITTSIITTTIITITIITTTIVTTTITIITTIIITT
TITTAIVTTITTTITTTTIITITATITTIATITTIITITTTITTTIIITTTNTTTINITT
NITTITTTITTTITTIIITTTIATITIITTTITTVITTTITAITTITTTIMTIIITNTIT
TTTITTTTTITTTITTTTTTTIITTIIITTTVITTIITTTIPATFISILLFF

>gi568815582f:10643960_10869102|GENSCAN_predicted_CDS_6|699_bp
atgggcacgtccaggctggcccctgtggctgctgcctgtctgcccacagaccaggatgac
atcaccacctccgtcatcaccacctccatcatcaccaccaccatcatcaccatcaccatc
atcaccaccactatcgtcaccaccaccatcaccatcatcaccaccatcatcatcaccacc
accatcaccaccgctatcgtcaccaccatcaccaccaccatcaccaccaccaccatcatc
accatcaccgccaccatcaccaccatcgccaccatcaccaccatcatcaccatcaccacc
accatcaccaccaccatcatcatcaccaccaccaacaccaccaccatcaacatcaccacc
aacatcactaccatcaccaccaccatcaccaccaccatcaccaccatcattatcaccacc
accattgccaccatcaccatcatcaccacaaccatcaccaccgtcatcaccaccaccatc
accgccatcaccaccatcactaccaccatcatgaccatcatcatcaccaacaccatcacc
accaccactatcaccaccaccaccaccatcaccaccaccatcaccaccaccaccaccacc
accatcatcaccaccatcatcatcaccaccactgtcatcaccaccatcatcaccaccacc
attcctgccacctttatcagtattcttctatttttctga

>gi568815582f:10643960_10869102|GENSCAN_predicted_peptide_7|116_aa
MLGERRFQALARAAALTPRAAMNNFQAILTQVRMLLSSHQPSLVQALLDNLLKEDLLSRE
YHCTLLHEPDSEALARKISLTLLEKGDLDLALLGWARSGLQPPAAERGPGHSDHGX

>gi568815582f:10643960_10869102|GENSCAN_predicted_CDS_7|348_bp
atgctgggtgagcggagattccaggcactggccagggcagctgccctgactccaagggct
gccatgaacaacttccaggccatcctgactcaggtgagaatgctgctctccagccatcag
cccagcctggtgcaggccctcttggacaacctgctgaaggaggacctcctctccagggaa
taccactgcactctgctccatgagcctgatagtgaggctctggccaggaagatctctttg
accctactagagaaaggagacctggatttggccctcctggggtgggcccggagtgggctg
cagcccccagcagccgagaggggccccggccacagtgaccatggtgnn