GENSCAN 1.0	Date run:  3-Nov-116	Time: 15:42:38

Sequence gi568815581r:76636164_76837160 : 200997 bp : 47.59% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  12663  12780  118  2  1   42   45    98 0.138   1.26
 1.02 Intr +  15473  15784  312  0  0   82   15   293 0.003  17.56
 1.03 Intr +  34890  35009  120  1  0   18  103    97 0.369   4.67
 1.04 Intr +  37656  37723   68  1  2   66   77    53 0.326   0.62
 1.05 Term +  38153  38260  108  1  0   89   37    66 0.358   0.11
 1.06 PlyA +  38787  38792    6                               1.05

 2.09 PlyA -  39782  39777    6                               1.05
 2.08 Term -  41539  41425  115  0  1   91   38   312 0.986  24.54
 2.07 Intr -  49002  48909   94  1  1   90   80   161 0.993  14.52
 2.06 Intr -  52051  51950  102  2  0   55  113   127 0.683  12.05
 2.05 Intr -  55926  55748  179  2  2   60   66    13 0.331  -4.14
 2.04 Intr -  60705  60572  134  0  2   98   51   154 0.274  12.14
 2.03 Intr -  70433  69809  625  1  1   93  -26   854 0.005  66.75
 2.02 Intr -  73799  73745   55  0  1   71   55    72 0.682   0.24
 2.01 Init -  74783  74294  490  2  1  105   36   509 0.340  40.77
 2.00 Prom -  75255  75216   40                              -0.36

 3.07 PlyA -  76693  76688    6                               1.05
 3.06 Term -  82697  82566  132  2  0   83   46   154 0.537   8.79
 3.05 Intr -  84335  84197  139  1  1   70   78   109 0.748   8.57
 3.04 Intr -  85193  85100   94  0  1   93   78    22 0.274   0.72
 3.03 Intr -  87895  87609  287  0  2   76   80   145 0.800   9.49
 3.02 Intr -  89692  89304  389  1  2   86  103   532 0.999  48.09
 3.01 Init -  90312  90184  129  0  0   65   89   291 0.999  27.05
 3.00 Prom -  90369  90330   40                             -16.86

 4.00 Prom +  90434  90473   40                              -8.56
 4.01 Init +  90596  90716  121  1  1   75   67   105 0.975   5.45
 4.02 Intr +  90759  91015  257  1  2  103   96   227 0.665  22.16
 4.03 Intr +  91135  91243  109  0  1   83   33    63 0.472   0.16
 4.04 Term + 100027 100235  209  2  2   67   44   406 0.791  31.60
 4.05 PlyA + 100319 100324    6                             -10.49

 5.02 PlyA - 100337 100332    6                              -1.75
 5.01 Sngl - 100997 100632  366  2  0   54   41   831 0.773  71.10
 5.00 Prom - 101207 101168   40                              -4.16

 6.00 Prom + 102851 102890   40                              -7.96
 6.01 Init + 104795 104901  107  1  2   86  111   -15 0.815   0.43
 6.02 Intr + 105806 105885   80  2  2   69  107    50 0.874   4.19
 6.03 Intr + 108159 108303  145  1  1  107   54   122 0.069  10.04
 6.04 Intr + 109230 109276   47  0  2  101   91    -1 0.039  -0.45
 6.05 Intr + 131223 131288   66  1  0   92   95    36 0.860   3.58
 6.06 Intr + 133583 133708  126  0  0   74   63   114 0.991   8.15
 6.07 Intr + 138834 139008  175  1  1   79   80   171 0.884  14.40
 6.08 Intr + 140243 140378  136  2  1   80   91    77 0.961   7.77
 6.09 Term + 142025 142189  165  1  0   76   39   119 0.996   3.72
 6.10 PlyA + 142636 142641    6                               1.05

 7.03 PlyA - 143318 143313    6                               1.05
 7.02 Term - 145188 145114   75  0  0  112   45    70 0.931   2.94
 7.01 Init - 170343 170206  138  0  0   88   57   121 0.024   7.14
 7.00 Prom - 182193 182154   40                              -5.86

 8.02 PlyA - 184433 184428    6                               1.05
 8.01 Sngl - 190567 190082  486  1  0   43   37   185 0.245   4.97

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 108159 108307  149  1  2  107   44   159 0.930  11.46
S.002 Term - 176954 176872   83  0  2  110   45    58 0.806   1.56
S.003 Init - 182000 181965   36  2  0   76   81    49 0.866   2.06


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:76636164_76837160|GENSCAN_predicted_peptide_1|241_aa
MSTKEGHVACCSMKEPYPQSNLQMLKEPTNQRRRQTNPVVVLINLLLLGMDIIILIIFSY
SLAHSKLSFLVFISILFLTITFFLFFIYLIVNLLLPIFLISVPISRGISSISASSTTSFF
SFKSLVVISELVSMAASDMMGHAEDSGRHQARRVQVGGATPRGVEPAGGHDWVQKRNVII
QPSGSLEKVVTVSPGSGEPANCIQMELRFGSFTEMNLCELMRTISDEVAEMVSTEASTYG
E

>gi568815581r:76636164_76837160|GENSCAN_predicted_CDS_1|726_bp
atgagcacaaaagaaggccacgtggcctgttgctccatgaaagagccgtatccacaaagc
aacctccaaatgctgaaggagccaaccaaccagaggaggaggcagacaaatccagttgtt
gtcctcatcaatcttctgcttcttggtatggacatcatcatccttatcatcttcagctac
tcacttgcccatagcaaactcagcttcctcgtcttcatctccatcctcttcctcaccatc
accttcttcctcttcttcatctacctcattgtcaacctcctgctcccaattttcctcatt
agtgttcccattagcagaggcatctcttccatttccgcctcctccacaacttccttcttc
tcctttaagtccttggtggtgatctcggagctggtgtctatggctgcatctgacatgatg
gggcatgccgaggactcaggccgccatcaggcccgaagagtccaggttggtggggccact
ccccgcggtgtggagcctgcagggggccacgactgggtgcagaaaaggaatgtgatcatt
cagccgagtgggtcattggaaaaggtggttaccgtcagtccaggaagtggggagccagct
aattgtatccagatggagcttagatttggttcattcactgaaatgaatctctgtgagctg
atgagaacaatctcagatgaggtagcagaaatggtgtcaacagaggccagcacttacggg
gaatag

>gi568815581r:76636164_76837160|GENSCAN_predicted_peptide_2|597_aa
MEAPAELLAALPALATALALLLAWLLVRRGAAASPEPARAPPEPAPPAEATGAPAPSRPC
APEPAASPAGPEEPGEPAGLGELGEPAGPGEPEGPGDPAAAPAEAEEQAVEARQVRTGAL
AAPSPPPGLRLPLPFPAEPGSGAAASSPGCPQEAQNPRPAGNAGKLGLDGVKMQDKALLE
HQCGLWKLQRPQPSQNDPGAGELPHHLSCLCDGSVVLFDGSVVLFDGSVVLFDGSVVLCD
GSVGLCDGSVGLCDGSVGLCDGRVGLCDGSVVLCDGSVGLCDGSVGLCDGSVGLCDGRVG
LCDGRVGLCDGSVGLCDGSVGLCDGSVGLCDGSVVLCDGSVGLCDGSVGLCDGSVVLCDG
SVVLCDSRVGLRDGSVVLCDGSVGLCDGSVEMILVAPTMAQLPDGGEDSDHETLERLPLA
GRTFTDSFNAELKARCEPLCLAQNLNVYQPLCAQEGLGTSADTGSFGDTDLPWLMDSSPW
SAIICLSFLLDHELLCAKGTDPVLVLQEEEQDLDGEKGPSSEGPEEEDGEGFSFKYSPGK
LRGNQYKKMMTKEELEEEQRVQKEQLAAIFKLMKDNKETFGEMSDGDVQEQLRLYDM

>gi568815581r:76636164_76837160|GENSCAN_predicted_CDS_2|1794_bp
atggaggcgccggccgagctactggccgcgctgcctgcgctggccaccgcgctggccctt
ctgctcgcctggctactggtgcggcgtggggcggccgcgagcccggagcctgcccgcgcg
cccccggaacccgcgcccccggccgaggccaccggggccccggcgccgtcccgcccctgc
gcccccgagccggcggcctcgcccgcggggccggaggagcctggagagcccgcggggctg
ggggagctcggggagcctgcgggaccgggggagcccgaagggccaggggatcccgcggcg
gcgccagcggaggcggaggagcaggcggtggaggcgaggcaggtacgcaccggggccctc
gcggccccctccccacccccggggctccggctgccgctgccgttccccgccgagccaggg
agcggggccgcggcctccagcccaggctgcccccaggaagcgcagaacccgcggcccgca
ggaaatgcaggtaagctgggcctggatggagtgaagatgcaggataaagccctcctggag
caccagtgtgggctctggaagctacagagaccccagccttcccagaatgacccaggagca
ggtgaacttccccatcatctctcctgcctttgtgatggcagtgtggtcctttttgatggc
agtgtggtcctttttgatggcagtgtggtcctttttgatggcagtgtggtcctttgtgat
ggcagtgtgggcctctgtgacggcagcgtgggcctctgtgacggcagcgtgggcctctgt
gatggcagagtgggcctctgtgatggcagcgtggtcctttgtgatggcagcgtgggcctc
tgtgacggcagcgtgggcctctgtgacggcagcgtgggcctctgtgatggcagagtgggc
ctctgtgacggcagagtgggcctttgtgatggcagcgtgggcctctgtgatggcagcgtg
ggcctctgtgacggcagcgtgggcctctgtgacggcagtgtggtcctttgtgatggcagc
gtgggcctttgtgatggcagcgtgggcctttgtgatggcagtgtggtcctctgtgatggc
agtgtggtcctttgtgatagcagagtgggccttcgtgatggcagtgtggtcctctgtgat
ggcagtgtgggcctttgtgatggcagtgtggaaatgatcctggtcgcacccaccatggca
cagctgcctgatggtggggaggactcagaccatgagaccctggagagattgcctttggct
ggccgcaccttcacggattcattcaacgctgagctgaaggccaggtgtgagccactgtgc
ctggcccagaatctaaatgtgtaccagcctctctgtgctcaggagggcttgggcacgtca
gctgatactgggtcctttggggatacggatctgccctggctcatggactcctcgccctgg
agtgcaattatttgtttgtctttcctactggaccacgagctcctctgtgccaagggcact
gaccctgtccttgtcttgcaggaagaggagcaggacttggatggtgagaaggggccatca
tcggaagggcctgaggaggaggacggagaaggcttctccttcaaatacagccccgggaag
ctgaggggaaaccagtacaagaagatgatgaccaaagaggagctggaggaggagcagaga
gttcagaaggaacagctggctgccatcttcaagctcatgaaagacaacaaggagacgttt
ggcgagatgtccgacggcgacgtgcaggagcagctccggctctacgacatgtag

>gi568815581r:76636164_76837160|GENSCAN_predicted_peptide_3|389_aa
MNHKSKKRIREAKRSARPELKDSLDWTRHNYYESFSLSPAAVADNVERADALQLSVEEFV
ERYERPYKPVVLLNAQEGWSAQEKWTLERLKRKYRNQKFKCGEDNDGYSVKMKMKYYIEY
MESTRDDSPLYIFDSSYGEHPKRRKLLEDYKVPKFFTDDLFQYAGEKRRPPYRWFVMGPP
RSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIY
PRTQLPTWPPEFKPLEILQKPGETVFVPEQIQHGQRQCKPPTATPCHCVPTLTWRDQLSG
ILKQEHPELAVLADSVDLQESTGIASDSSSDSSSSSSSSSSDSDSECESGSEGDGTVHRR
KKRRTCSMVGNGDTTSQDDCVSKERSSSR

>gi568815581r:76636164_76837160|GENSCAN_predicted_CDS_3|1170_bp
atgaaccacaagagcaagaagcgcatccgcgaggccaagcggagtgcgcggccggagctc
aaggactcgctggattggacccggcacaactactacgagagcttctcgctgagcccggcg
gccgtggcggataacgtggaaagggcagatgctttacagctgtctgtggaagaatttgtg
gagcggtatgaaagaccttacaagcccgtggttttgttgaatgcgcaagagggctggtct
gcgcaggagaaatggactctggagcgcctaaaaaggaaatatcggaaccagaagttcaag
tgtggtgaggataacgatggctactcagtgaagatgaagatgaaatactacatcgagtac
atggagagcactcgagatgatagtcccctttacatctttgacagcagctatggtgaacac
cctaaaagaaggaaacttttggaagactacaaggtgccaaagtttttcactgatgacctt
ttccagtatgctggggagaagcgcaggcccccttacaggtggtttgtgatggggccacca
cgctccggaactgggattcacatcgaccctctgggaaccagtgcctggaatgccttagtt
cagggccacaagcgctggtgcctgtttcctaccagcactcccagggaactcatcaaagtg
acccgagacgaaggagggaaccagcaagacgaagctattacctggtttaatgttatttat
ccccggacacagcttccaacctggccacctgaattcaaacccctggaaatcttacaaaaa
ccaggagagactgtctttgtaccagaacagatacagcacgggcagcggcagtgcaagcca
cccacagccaccccgtgccactgtgtcccaaccctgacctggagggaccagctctcgggg
attttgaagcaagagcaccccgagttggcagtcctcgcagactcggttgaccttcaggag
tccacagggatagcttccgacagctccagcgactcttccagctcctccagctccagttcg
tcagactccgactcagagtgcgagtctggatccgagggcgatgggacagtgcaccgcagg
aagaagaggaggacgtgcagcatggtgggaaacggggacaccacctcccaggacgactgt
gtcagcaaagagcgcagctcctccaggtga

>gi568815581r:76636164_76837160|GENSCAN_predicted_peptide_4|231_aa
MLGRSRRLRHRPAPPRPSPPALPLCPSLPVAPAARCQFCASRQGYHQIWAFPFLPSGATA
TWPAASRSRSLAARSLPRSPARPGPNDALLGEHDFRGQGVRAQRFRFSEEPGPGADGAVL
EVHVPQVDPRSKNVGYEALRCIKCLSVRILETLPRSDPGHYVGDLGGLFDRDLDLDSLLD
TGGGLLDRDRDLDRERDLETDEDLDLDLRADLDLEVDRDRERVRDRDFERL

>gi568815581r:76636164_76837160|GENSCAN_predicted_CDS_4|696_bp
atgttgggaaggtcacgtcggctgcgtcaccgccccgccccgccccgcccctcccctccc
gcgctgccgctgtgcccatcacttccggtcgcgccagccgcccgttgccagttctgcgcg
tcgcggcagggttatcaccagatctgggctttccccttcttgccgtcaggtgctacggcc
acgtggcccgcggcttcccgctcgcgcagtctggcagcccggagccttccgcggtccccc
gcccgcccggggcccaacgacgccctactgggcgagcacgatttccgaggacagggggtc
cgggcccagcgctttcgattctcggaggagccgggtccgggggccgacggggctgtcctg
gaggtccacgtcccgcaggttgacccccggagcaaaaacgtcggatatgaagcccttcgg
tgcattaaatgtctctcagtaagaattttggagaccctgccaagaagtgaccctggtcac
tatgttggagacttggggggactcttcgatcgcgacctggatttggattccctcttggac
actgggggaggactcctggaccgagaccgggacctggaccgcgaacgagatctggagacc
gacgaggacttggacttggaccttcgtgcggatctggacttggaggtcgaccgagatcga
gaacgagtgcgggaccgagacttcgagcggctgtag

>gi568815581r:76636164_76837160|GENSCAN_predicted_peptide_5|121_aa
MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPRRYGGGGYGRRSR
R

>gi568815581r:76636164_76837160|GENSCAN_predicted_CDS_5|366_bp
atgagctacggccgcccccctcccgatgtggagggtatgacctccctcaaggtggacaac
ctgacctaccgcacctcgcccgacacgctgaggcgcgtcttcgagaagtacgggcgcgtc
ggcgacgtgtacatcccgcgggaccgctacaccaaggagtcccgcggcttcgccttcgtt
cgctttcacgacaagcgcgacgctgaggacgctatggatgccatggacggggccgtgctg
gacggccgcgagctgcgggtgcaaatggcgcgctacggccgccccccggactcacaccac
agccgccggggaccgccaccccgcaggtacgggggcggtggctacggacgccggagccgc
aggtaa

>gi568815581r:76636164_76837160|GENSCAN_predicted_peptide_6|348_aa
MAIIYGVFSASNLITPSVVAIVGPQLSMFASGLFYSMYIAVFIQPFPWSFYTASVFIGIA
AAESDRRTVFIALTVISLVGTVLFFLIRKPDSENVLGEDESSDDQDMEVNEHWVFYKLKA
CGNPASKKSFKLCVTKEMLLLSITTAYTGLELTFFSGVYGTCIGATNKFGAEEKSLIGLS
GIFIGIGEILGGSLFGLLSKNNRFGRNPVVLLGILVHFIAFYLIFLNMPGDAPIAPVKGT
DSSAYIKSSKEVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAPAFAIFKFVQSICAAV
AFFYSNYLLLHWQLLVMVIFGFFGTISFFTVEWEAAAFVARGSDYRSI

>gi568815581r:76636164_76837160|GENSCAN_predicted_CDS_6|1047_bp
atggctattatctatggagtgttctctgcttcaaatttgattacaccgtcagtggttgcc
attgtaggacctcaactctctatgtttgccagtggtttattttacagcatgtacattgcc
gttttcatccagcctttcccgtggtccttctacacagcctctgttttcattggaattgct
gctgctgagagtgaccgaagaacagtgtttattgccctaacggtgattagccttgtgggg
acagttctattctttctcattcggaaaccagattctgaaaatgtcctaggagaagatgag
tcttctgatgaccaggacatggaagtcaacgaacactgggttttttacaaattgaaggct
tgtggcaaccctgcatcgaaaaagtcttttaagttatgtgtcaccaaggagatgctcctt
cttagtattacaactgcttatacaggtctggaattaactttcttctctggtgtatatgga
acctgtattggtgctacaaataaatttggagcagaagagaaaagccttattggactttct
ggcattttcatcggcattggagaaattttaggtggaagcctcttcggcctgctgagcaag
aacaatcgttttggtagaaatccagttgtgctgttgggcatcctggtgcacttcatagct
ttttatctaatatttctcaacatgcctggagatgccccgattgctcctgttaaaggaact
gacagcagtgcttacatcaaatccagcaaagaagttgccattctctgcagttttctgttg
ggccttggagacagctgctttaatacccagctgcttagtatcttgggctttctgtattct
gaagacagcgccccagcatttgccatcttcaagtttgttcagtctatttgcgcagccgtg
gcatttttctacagcaactaccttctccttcactggcaactcctggtcatggtgatattt
gggttttttggaacaatttctttcttcactgtggaatgggaagctgccgcctttgtagcc
cgcggctctgactaccgaagtatctga

>gi568815581r:76636164_76837160|GENSCAN_predicted_peptide_7|70_aa
MRLHSSALGWSMGLGALEQVAALIGEARAGQEPTAGAGRLRHSRLQLSLLVTFDGDSCHV
VGCPEDYSVA

>gi568815581r:76636164_76837160|GENSCAN_predicted_CDS_7|213_bp
atgcgcctgcactcctcagcccttgggtggtcgatgggactgggtgccctggagcaggtg
gcggcgctcattggggaggctcgggcagggcaggagcccacggcgggggcggggaggctc
agacatagcaggctgcagctgtccttgcttgtgacctttgatggagacagctgccatgtc
gtaggctgccctgaggactactccgtagcatga

>gi568815581r:76636164_76837160|GENSCAN_predicted_peptide_8|161_aa
MQFQQQKCTITPARKQQVQASYYSAFDSPALTWLLTAFTRRNLNLHRNDETGAEGDIPEP
GRLQASFPPQPILSAEWGREVLLASCWTAAALACGSYTHSLTGTSAGRNRIGYLHLNAPL
PLTGTCHCSVQSCPPRCLEGLCGTAEYTRTQRRGASLNTVT

>gi568815581r:76636164_76837160|GENSCAN_predicted_CDS_8|486_bp
atgcaatttcagcagcagaaatgcaccatcactccggccaggaagcagcaggtacaggca
tcttattactcggcatttgatagcccggctctcacttggttgttaacagccttcacaaga
agaaacctcaatctgcaccgaaatgatgagaccggtgcagagggagacatcccggagcct
ggacgccttcaggcctcgtttcctccccagcccatcctcagcgcagagtgggggagagaa
gtcctgcttgcctcatgttggacagcagccgcccttgcatgtggaagttacacacactca
ctcacagggaccagcgcagggagaaacagaattggctacctccacctcaatgctcccctt
ccgctcacgggcacctgccactgctctgtccagtcctgccctccacggtgccttgagggc
ctgtgtggtacagccgagtacaccaggacccagcgaagaggtgcctccctcaacactgtc
acatag