GENSCAN 1.0	Date run:  5-Nov-116	Time: 10:40:41

Sequence gi568815581r:64649919_64858379 : 208461 bp : 47.22% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4011   4178  168  2  0   82   94   113 0.793  10.83
 1.02 Term +  27548  27643   96  1  0  100   39    76 0.737   1.87
 1.03 PlyA +  27800  27805    6                               1.05

 2.00 Prom +  45335  45374   40                              -3.36
 2.01 Init +  56592  56638   47  2  2   85   99    80 0.950   7.10
 2.02 Intr +  63148  63217   70  1  1  112   89   -11 0.145   0.58
 2.03 Intr + 100499 100999  501  1  0   14  -95   599 0.336  27.38
 2.04 Term + 101045 101392  348  1  0   19   47   473 0.951  30.79
 2.05 PlyA + 101658 101663    6                               1.05

 3.05 PlyA - 101711 101706    6                               1.05
 3.04 Term - 102038 101871  168  2  0   91   34    74 0.554   0.18
 3.03 Intr - 104736 104503  234  0  0   97   92   171 0.941  16.29
 3.02 Intr - 108461 108324  138  2  0   21   98   142 0.916   9.16
 3.01 Init - 108685 108611   75  1  0   73   79    57 0.891   4.39
 3.00 Prom - 114226 114187   40                              -1.76

 4.12 PlyA - 114899 114894    6                               1.05
 4.11 Term - 129021 128530  492  0  0    5   48   573 0.518  39.61
 4.10 Intr - 129161 129066   96  2  0  102  -44   220 0.531  10.41
 4.09 Intr - 131121 130980  142  2  1  129   64   -26 0.231  -0.54
 4.08 Intr - 131698 131477  222  0  0   68   59    79 0.028   0.24
 4.07 Intr - 136806 136649  158  0  2   64   85   257 0.958  21.81
 4.06 Intr - 141123 141039   85  2  1  136   49    15 0.909   2.22
 4.05 Intr - 142624 142431  194  1  2   60   83   338 0.945  28.79
 4.04 Intr - 147491 147346  146  0  2   97  131   198 0.977  25.00
 4.03 Intr - 150999 150082  918  1  0  113   55  1365 0.998 126.93
 4.02 Intr - 151215 151184   32  2  2   70   93    18 0.949  -1.73
 4.01 Init - 152301 152138  164  0  2   69   80   181 0.950  14.60
 4.00 Prom - 154579 154540   40                              -6.96

 5.11 PlyA - 156218 156213    6                               1.05
 5.10 Term - 161943 161848   96  0  0  108   32    52 0.502  -0.43
 5.09 Intr - 165166 164945  222  1  0   59  117   146 0.923  12.92
 5.08 Intr - 165387 165300   88  2  1   74   97   -19 0.065  -2.43
 5.07 Intr - 172475 171849  627  1  0   82   70   694 0.078  58.32
 5.06 Intr - 174954 174707  248  0  2   77   52   324 0.955  23.96
 5.05 Intr - 178453 178357   97  0  1  106   63     9 0.557   0.21
 5.04 Intr - 183531 183410  122  0  2  112   59    64 0.390   5.19
 5.03 Intr - 187415 187138  278  0  2   95   97   151 0.875  13.94
 5.02 Intr - 197067 196981   87  1  0   45   92    82 0.229   4.24
 5.01 Intr - 205971 205922   50  2  2   90   94    91 0.943   8.22

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 172475 171845  631  1  1   82   48   698 0.876  58.99


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:64649919_64858379|GENSCAN_predicted_peptide_1|87_aa
MNGSQKHYAKRSLTQKTADSMIPFTQNPRKGKIIVTENRSVVDKFSVLKKTTGYKENWTL
TWNPAHGLDPTTQLPRFYNLERRNTYG

>gi568815581r:64649919_64858379|GENSCAN_predicted_CDS_1|264_bp
atgaatggatctcaaaagcattacgctaaaagaagcctcacccaaaagactgcagacagt
atgattccatttactcaaaatcctagaaaaggcaaaattatagtgaccgaaaacagatca
gtggttgacaagttctcggtattgaagaagacaactggctacaaagagaactggactctc
acctggaacccagcccacggcttggatcccaccacccagctgccacgcttctacaatcta
gagcggcgtaatacatatggctag

>gi568815581r:64649919_64858379|GENSCAN_predicted_peptide_2|321_aa
MLFIKLAFPLFIKLPRFSKQILNMSCKSQESAHRETQRRTKVRGLIEIISNAAGYENIPI
QHHEENFLRQLAQKVPDKLNNPKFNDPHIKTNLLLQAHLSRMQLSAELQSDTEEILSKAV
RLVQACVDVLSSNGWLSSALAAMELAQMVTQAMWSKDSYLKQLPHFISEHIKRCTDKGVK
SVFDIMEMEDEERNTILQLTDSQITDEVVDKDSIRSGGPAVVLVQLEREEEVTGPVIAPL
FPQKREEGWWVVIGDTKSNSLISIKRLILQQKAKVKLDFVAPATGAHNYTLYFMSDAYMG
CDQEYKFSMDVKEAETDSDSD

>gi568815581r:64649919_64858379|GENSCAN_predicted_CDS_2|966_bp
atgctgttcatcaaactggcctttcccctgttcatcaaactgcccagattctccaagcaa
atattaaacatgtcctgcaaatctcaggaatcagcacacagagaaacacaaagaagaacc
aaggtgcgagggcttattgagatcatctccaatgcagcagggtacgagaatatccccatc
cagcaccatgaagaaaacttcctgaggcagttggctcagaaggtccctgacaagctgaat
aaccctaagttcaatgatccgcacatcaagaccaacctgctcctgcaggctcacctgtcc
cgcatgcagctgagtgctgagttgcagtcagatacggaggaaatccttagtaaggcagtc
cggctcgtccaggcctgcgtggatgtcctctccagcaatgggtggctcagctctgctctg
gcagctatggaattggcccagatggtcacccaagccatgtggtccaaggactcatacctg
aagcagctgccacacttcatctctgagcatatcaaacgttgcacagacaagggagtgaag
agtgttttcgacatcatggagatggaggatgaagaacggaacacaattcttcagctgact
gacagccagattacagatgaggtggtggataaggacagcatccgcagtggcgggccagcg
gtggtgctggtgcagctggagcgagaggaggaagtcacaggccctgtcattgcgcctctc
ttcccgcagaaacgtgaagagggctggtgggtggtgattggagacaccaagtccaatagc
ctcatctccatcaagaggctgatcctgcagcagaaggccaaggtgaagttggactttgtg
gctccagccactggtgcccacaactacactctatacttcatgagtgatgcttacatggga
tgtgaccaggagtacaaattcagcatggatgtgaaagaagccgagacggacagtgattca
gattga

>gi568815581r:64649919_64858379|GENSCAN_predicted_peptide_3|204_aa
MSTNENANTQAAHLHRSKNKGKDSTETRRHRIEVNVELRKAKKDDQMLKRRNVSSFPDDA
TSPLQENCNNQTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTM
SNITASRQDQIQQVVNHGLVPFLVSDLSKAAEKLGETEKLSIMIEECGGVDKIEALQNHE
NESVYKASLSLTEKYFSVEVSNGW

>gi568815581r:64649919_64858379|GENSCAN_predicted_CDS_3|615_bp
atgtccaccaatgagaatgctaatacacaagctgcccatcttcacagatctaagaacaag
ggaaaggacagtacagaaacgaggcgtcacagaatagaggtcaatgtggagctgaggaaa
gctaagaaggatgaccagatgctgaagaggagaaatgtaagctcatttcctgatgatgct
acttctccgctgcaggaaaactgcaacaaccagactcctgccctaagagccatagggaat
atcgtcactggtacagatgaacagactcaggttgtgattgatgcaggagcactcgccgtc
tttcccagcctgctcaccaaccccaaaactaacattcagaaggaagctacgtggacaatg
tcaaacatcacagccagccgccaggaccagatacagcaagttgtgaatcatggattagtc
ccattccttgtcagcgatctctctaaggctgctgagaaactaggtgaaactgagaaactt
agtataatgattgaagaatgtggaggcgtagacaaaattgaagctctacaaaaccatgaa
aatgagtctgtatataaggcttcattaagcttaactgagaagtatttctctgtagaggtg
agtaatggatggtaa

>gi568815581r:64649919_64858379|GENSCAN_predicted_peptide_4|882_aa
MRTIQEEAGWQQEFILDMSAEILVDMYGTGGYMNVDFKNKVQAGDKNWELKPESSEIQDA
RAAVDGLSNPFQGLMKLGTVERQGAMGIWKELFCELSPLEFRLYLSNEEHTCVENCSLLR
CESVGPAHSDGRFELVFSGKKLALRASSQDEAEDWLDLVREALQKVRPQQEDEWVNVQYS
DQPEEPPEAPQGCLSPSDLLSEPAALQGTQSDWSSAQVPELDAIKESLLYLYMDRTWMPY
IFSLPLEALKCFRIRNNEKMLSDSHGVETIRDILPDTSLGGPSFFKIITAKAVLKLQAGN
AEEAALWRDLVRKVLASYLETAEEAVTLGGSLDENCQEVLKFATRENGFLLQYLVAIPME
KGLDSQGCFCAGCSRQIGFSFVRPKLCAFSGLYYCDICHQDDASVIPARIIHNWDLTKRP
ICRQALKFLTQIRAQPLINLQMVNASLYEHVERMHLIGRSREQLKLLGDYLGLCRSGALK
ELSKRAGPESASLKTASSILAAVLPEPGLLRARIADEVYEGFLKALIEFASQHVYHCDLC
TQRSFICQICQHHDIIFPSEFDTTVSPAPVREEVLPGALRRCLTGYSAIQETWQRRSRAV
EEGARDAEPTRACRDKWRRGRRADAPRCPGRQWAAERELRLAKELWPGPLLIQPETLRSG
GRPCAGNPSRSFSRPGRVAPGKALLGEENAAAAMAADVEGDVYVLVEHPFEYTGKDGRRH
RALSIGGTCGASPAAAPSTCPRSTCASCLRWATLPLTRRQVPPSGPAAPEPLAYDYRFVS
AAVAAAPNGPPAEPRGGASSLCGPAQRGAASQRSSLAPGLPACLYLRPTAPVRPAQSLDD
LTRAVVSPPAGNLGSSGSFKACSVAGSWVCLLPLSRSDSENV

>gi568815581r:64649919_64858379|GENSCAN_predicted_CDS_4|2649_bp
atgaggaccattcaggaggaagcaggctggcagcaggaattcatcctggacatgtcagct
gagatcctagtggacatgtatggcacaggtggatatatgaatgtggatttcaagaacaag
gtccaggctggcgataaaaattgggagctaaagcctgagagcagtgaaatacaggatgca
agagcagcagtggacggactgtccaacccattccagggtctcatgaagctgggcaccgtg
gagcggcagggggcaatgggcatctggaaggagctcttctgcgagctctccccactggag
ttccgcctctacctgagcaacgaggagcacacctgtgtggagaactgctccctgcttcgc
tgtgagtctgtggggccagcccacagtgacgggcgctttgagctggtcttctctggcaag
aagctggccctgcgcgcctcctcccaggacgaagctgaggactggctggacctggtgcgg
gaggccctgcagaaggtccggcctcagcaggaggatgagtgggtgaacgtgcagtactca
gaccagcctgaggaaccccccgaggcgccccagggctgcctctctccctcagacctgctc
tcggagcccgcggccctccagggcacacagtctgactggtcgtccgcccaggttccagag
ctagatgccatcaaggagtccctgctgtacttgtacatggacaggacctggatgccctat
atattttctctgcccttggaggctctgaaatgtttccgcatcaggaacaatgagaagatg
ctgagtgacagccacggcgtggagaccatccgggacatcctgccagacaccagccttggg
ggcccatccttcttcaaaatcatcacggccaaggctgtcctgaagctgcaggccggaaac
gccgaggaagccgccctgtggagggatctggtccgcaaagtcctggcatcctacttggag
acagccgaggaggcggtgaccctgggcgggagcctggatgaaaactgtcaggaggtgctg
aaatttgccacccgggagaatggcttcctgctgcagtacctggtggccatccccatggag
aaaggccttgactcccaaggctgcttctgcgcaggctgctcccggcagatcggcttctcc
tttgtacgacccaagctctgtgccttctctggcctctattactgtgacatctgccaccaa
gacgatgcctcagtgattccggccaggatcatccacaactgggacctcaccaagcgcccg
atctgcaggcaggccctgaagtttctgacgcagatccgggcccagcccctcatcaacctg
cagatggtgaacgcgtctctgtacgagcatgtggagcggatgcacctcattgggaggagc
cgggagcagctgaagctcctgggggattacctgggcctgtgccggagtggcgccctgaag
gagctcagcaagagggctggcccagagagcgcctctctgaagactgcctcctccatcctg
gctgcagtgctcccagagccgggcctcctcagggccaggatcgcagatgaggtatatgaa
ggattcctcaaggccctgattgaatttgcctcccagcatgtctaccactgcgacctgtgc
acccagcgcagcttcatctgccagatctgccagcaccacgacatcatcttcccctctgag
tttgacaccacagtcagcccagccccagtccgggaggaagttctgccgggcgctctccgc
cggtgcctcactggttatagtgctatacaggaaacctggcagcgccggagccgcgcggtc
gaggagggagcgcgggacgccgagcccacgcgcgcctgccgggacaagtggagacgaggc
cggcgagcggacgccccgaggtgcccgggcaggcagtgggccgccgagcgggagttgagg
ttggcgaaggagctgtggccgggtccccttcttatccagcccgagacactgcgctccggt
gggcgtccctgcgctgggaatccctctcggagtttttccaggcccggccgggttgctccg
ggaaaggccctgttgggggaggaaaatgccgcggccgcaatggcggcggatgtggagggg
gacgtgtacgtactggtggagcaccccttcgagtacaccggcaaggacgggcgccgccac
agagcactgagcattggtggcacgtgcggcgcaagcccggcggccgccccttctacctgc
ccgcgcagtacgtgcgcgagctgcctgcgctgggcaaccctgccgctgacgcgccgccag
gtccccccatcgggacccgcagcccctgagccgctcgcctacgactaccggttcgtgagc
gcggctgtggcagcggcccccaacggccccccagcggagccccgaggcggggccagctcc
ctgtgcggccctgcgcagcgcggcgccgcgagccagcgcagcagcctggcgcccggcctg
cccgcctgcctgtacctgcggcccacggcgcccgtgcggcccgcgcagtccctggacgac
ctgacgcgcgccgtcgtctcgcctcccgccggcaacctcggaagcagcggcagcttcaag
gcctgcagcgtagcgggctcctgggtgtgcctgctgcccctgtcgcgcagcgactcagag
aacgtctaa

>gi568815581r:64649919_64858379|GENSCAN_predicted_peptide_5|638_aa
XSVVTEGHYKKMKKDSQELSDTKSRIYCHPKGPPEERGYTGSNTKAGAPSSPASQTSHLP
RGSAPRDFREQLAPPQGSFGLRDWHRGPGAGPERRANVMASGAGALLPVVSGRETASSAR
RLRGCRSREPPSPRSSLRLVGLLEATPLFTLVLCVNEERFEDRKWNQFHRMVDSESGPPG
ACRIPPQDPPELGQKPGQPSLLTTAAQTDSMRVIKKKLVGSVKALQKQYVSLDMVVTSED
GDANTMCSALEAVFIHGLHTKHIRAEAGGKRKKSAHQKPLPQPVFWPLLKAVTPKHIISE
LEHLTFVNMDVGRCRAWLRLALNNGLMECYLKLLLQEQARLREYYQPTALLRDAEEGEFL
LSFLQGLMSLSFELSYKSAILNEWTLTPLALSGLCPLSELDPLSTSGAELQRKESLDSIS
HSSGSEDIEVHHSGHKIRRNQKPTASSLSLDTASSSQLSCSLNSDSCLLQENGSKSPDHC
EEPMSYDSDLGTANAEDSDQSLQDCLGHYRRQPVTQVSLFKTSMVLLEFSKAQAASGTQD
GVHVQEPHPQAPSPLDLQQPVESTSGQQPSSTVSETAREVGQGNGLQKAQAHDGAGLKLV
VSSPTSPNISSMIQSTRPVHFCIVSTKHCTWEKVGMDE

>gi568815581r:64649919_64858379|GENSCAN_predicted_CDS_5|1917_bp
nnatctgttgtcaccgaaggtcattacaagaagatgaagaaggattctcaagagctgtca
gacaccaaatcccgtatctactgccacccaaagggacctccagaagaaaggggttataca
gggtcaaacaccaaggcaggcgcccccagttccccagcctcccagacctcgcatctgccc
cggggctcagctcccagggacttccgggagcagctggccccgccccaaggctccttcggg
ctgcgcgattggcaccgcgggccgggggcagggccggagcgccgagccaacgtgatggcg
tcaggggccggggcgctgcttcctgttgtcagtggccgagagaccgcatcgtcggctcgg
aggctgaggggctgccgcagccgggagcccccctcgcctcgctcctcgctccgcttggta
ggtctccttgaagccacacctctcttcactttggttctttgtgtcaatgaagagcgtttt
gaggacagaaagtggaaccagttccataggatggtagattcagaatctgggccaccaggt
gcctgccgaatcccaccccaggaccctccagagctagggcagaagcctggccaacccagc
cttctaacaacagctgcacaaactgactccatgagggtcatcaagaagaagctggtggga
tccgtgaaagccttgcaaaagcagtacgtgtccctggacatggtggtcactagtgaagac
ggagatgccaacaccatgtgcagcgccctggaggccgtatttatccatggcctgcacacc
aagcacatccgagctgaggccggaggaaaaaggaagaaaagtgcccaccagaagcctctg
ccccagcctgtcttctggcccctcctgaaagctgtcacccccaaacacatcatctcagag
ttggagcacctgacgtttgtcaacatggatgtgggccgctgccgggcatggctgcggctg
gccctgaacaatggcctgatggagtgctacctgaagctgctgctgcaggagcaggcccgc
ttgcgtgagtactaccagcccaccgccctgctccgggatgctgaggagggcgagttcctc
cttagcttcctgcagggcctcatgtccttgtccttcgaactctcctacaagtctgccatc
ttaaatgagtggacgctcaccccactggccctgtctgggctttgcccgctttctgagctg
gaccctctctctacctctggtgcagaactacagcggaaggaatctctggattccatttcc
cattcttcaggctctgaagacatcgaagtccatcactcgggccataagatacggaggaac
cagaagccgactgcctcctccctcagcctggacacggccagttcatcccagctgtcctgc
agcctaaactctgatagctgcttactccaagagaatggctccaagagtccagaccattgc
gaggagcccatgtcctatgactcagacctgggcacagcaaatgctgaggactcagaccag
tctctgcaagattgccttgggcattatcgcagacaacctgtcacacaggtttctttgttt
aaaacttctatggtattgttggaattcagcaaagcccaggcagcctctggaactcaagat
ggtgtccacgtgcaggagccgcatccccaggcgcccagccccctggacttacagcagcct
gtagagagcacctcaggccagcagccttctagtactgtcagcgagacagccagagaagtg
ggccaagggaatggcctgcagaaggcccaggctcatgacggagctggtctgaagctggta
gtttcctcacccaccagtccgaatattagctctatgatacagagcaccaggcctgttcac
ttctgtattgtcagcaccaagcactgtacctgggagaaagtaggcatggatgaatag