GENSCAN 1.0	Date run:  8-Nov-116	Time: 13:29:48

Sequence gi568815581f:56878160_57106232 : 228073 bp : 44.83% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.11 PlyA -   3303   3298    6                               1.05
 1.10 Term -   6682   6481  202  0  1   75   49   203 0.622  11.96
 1.09 Intr -  14070  13545  526  1  1   62   32   548 0.066  38.60
 1.08 Intr -  17282  17184   99  0  0  100   65    95 0.984   8.48
 1.07 Intr -  17445  17362   84  1  0  102  110    19 0.968   5.29
 1.06 Intr -  17793  17767   27  1  0   68   99    29 0.512   0.09
 1.05 Intr -  21021  20956   66  1  0   70  100    33 0.732   1.58
 1.04 Intr -  23419  23260  160  1  1   61   60   198 0.998  13.86
 1.03 Intr -  26329  26096  234  1  0   89   92   349 0.999  33.29
 1.02 Intr -  30404  30309   96  2  0  116  100    97 0.998  13.91
 1.01 Init -  35829  35233  597  0  0   95   75   920 0.987  86.68
 1.00 Prom -  43100  43061   40                              -2.46

 2.08 PlyA -  43242  43237    6                               1.05
 2.07 Term -  60995  60912   84  2  0  104   48    42 0.773  -0.55
 2.06 Intr -  63964  63876   89  2  2  111  100    80 0.970  11.19
 2.05 Intr -  68352  68283   70  0  1   64  105     7 0.484  -1.25
 2.04 Intr -  71275  71228   48  1  0   88  116    40 0.924   5.68
 2.03 Intr -  71608  71522   87  1  0   79   71    36 0.630   1.17
 2.02 Intr -  72837  72054  784  2  1   89   22   327 0.389  17.68
 2.01 Init -  82860  82616  245  0  2   84   85   263 0.999  22.81
 2.00 Prom -  86902  86863   40                              -3.26

 3.00 Prom +  89798  89837   40                              -5.76
 3.01 Init + 100001 100076   76  1  1   67   96   238 0.999  21.75
 3.02 Intr + 102923 103071  149  0  2   25  103   226 0.832  17.75
 3.03 Intr + 107219 107308   90  1  0  131   27    61 0.923   4.49
 3.04 Intr + 109536 109691  156  2  0   41  115   162 0.900  14.41
 3.05 Intr + 110057 110131   75  1  0   69   90    60 0.941   4.01
 3.06 Intr + 112940 113012   73  1  1  123  111    50 0.997   9.78
 3.07 Intr + 116822 116859   38  0  2   63  115    25 0.965   0.68
 3.08 Intr + 117348 117476  129  2  0   49   98   101 0.919   8.09
 3.09 Intr + 120240 120339  100  2  1   30   65    75 0.651  -0.92
 3.10 Intr + 122696 122833  138  0  0   99   49   306 0.989  28.24
 3.11 Intr + 123859 124022  164  2  2  115   95   156 0.993  18.69
 3.12 Term + 128014 128076   63  0  0   95   45    48 0.737  -0.91
 3.13 PlyA + 128310 128315    6                               1.05

 4.00 Prom + 128479 128518   40                              -3.56
 4.01 Init + 130556 130620   65  1  2   37   46   128 0.324   4.12
 4.02 Intr + 133524 133590   67  0  1   66  109    25 0.145   1.31
 4.03 Intr + 162552 162650   99  2  0   85   60    34 0.020   0.61
 4.04 Intr + 167538 167718  181  2  1   19   -7   295 0.098  12.54
 4.05 Term + 167901 168286  386  1  2  -49   52   658 0.922  43.55
 4.06 PlyA + 168615 168620    6                               1.05

 5.10 PlyA - 170115 170110    6                               1.05
 5.09 Term - 185722 185574  149  2  2   61   40    97 0.208   0.26
 5.08 Intr - 201251 201128  124  2  1   86   62    -7 0.043  -3.34
 5.07 Intr - 206859 206681  179  1  2  -13   93   140 0.549   4.04
 5.06 Intr - 207313 207112  202  1  1   49   11   166 0.589   3.86
 5.05 Intr - 207961 207773  189  1  0   61   76   134 0.949   9.28
 5.04 Intr - 216327 216033  295  2  1   11   84   141 0.507   3.01
 5.03 Intr - 218242 218097  146  1  2   47   82   123 0.638   6.68
 5.02 Intr - 219943 219817  127  0  1   89   47   100 0.898   6.68
 5.01 Init - 223790 223756   35  2  2  101   87    -4 0.799   0.14
 5.00 Prom - 225094 225055   40                              -8.36

 6.00 Prom + 226199 226238   40                              -8.76
 6.01 Init + 227306 228061  756  1  0   74   41   454 0.469  32.01

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  14070  13541  530  1  2   62   48   560 0.920  43.82


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:56878160_57106232|GENSCAN_predicted_peptide_1|696_aa
MAELCPLAEELSCSICLEPFKEPVTTPCGHNFCGSCLNETWAVQGSPYLCPQCRAVYQAR
PQLHKNTVLCNVVEQFLQADLAREPPADVWTPPARASAPSPNAQVACDHCLKEAAVKTCL
VCMASFCQEHLQPHFDSPAFQDHPLQPPVRDLLRRKCSQHNRLREFFCPEHSECICHICL
VEHKTCSPASLSQASADLEATLRHKLTVMYSQINGASRALDDVRNRQQDVRMTANRKVEQ
LQQEYTEMKALLDASETTSTRKIKEEEKRVNSKFDTIYQILLKKKSEIQTLKEEIEQSLT
KRDEFEFLEKASKLRGISTKPVYIPEVELNHKLIKGIHQSTIDLKNELKQCIGRLQEPTP
SSGDPGEHDPASTHKSTRPVKKVSKEEKKSKKPPPVPALPSKLPTFGAPEQLVDLKQAGL
EAAAKATSSHPNSTSLKAKVLETFLAKSRPELLEYYIKVILDYNTAHNKVALSECYTVAS
VAEMPQNYRPHPQRFTYCSQVLGLHCYKKGIHYWEVELQKNNFCGVGICYGSMNRQGPES
RLGRNSASWCVEWFNTKISAWHNNVEKTLPSTKATRVGVLLNCDHGFVIFFAVADKVHLM
YKFRVDFTEALYPAFWVFSAGATLSICSPKNVKGHELIQDLLSSLHLDSSYPPDAGLSDD
DEPPNASLPPDPPLLTVPQMHSVCDQWLQDAFHISL

>gi568815581f:56878160_57106232|GENSCAN_predicted_CDS_1|2091_bp
atggcagagctgtgccccctggccgaggagctgtcgtgctccatctgcctggagcccttc
aaggagccggtcaccactccgtgcggccacaacttctgcgggtcgtgcctgaatgagacg
tgggcagtccagggctcgccatacctgtgcccgcagtgccgcgccgtctaccaggcgcga
ccgcagctgcacaagaacacggtgctgtgcaacgtggtggagcagttcctgcaggccgac
ctggcccgggagccacccgccgacgtctggacgccgcccgcccgcgcctctgcacccagc
ccgaatgcccaggtggcctgcgaccactgcctgaaggaggccgccgtgaagacgtgcttg
gtgtgcatggcctccttctgtcaggagcacctgcagccgcacttcgacagccccgccttc
caggaccacccgctgcagccgcccgttcgcgacctgttgcgccgcaaatgttcccagcac
aatcggctgcgggaatttttctgccccgagcacagcgagtgcatctgccacatctgcctg
gtggagcataagacctgctctcccgcgtccctgagccaggccagcgccgacctggaggcc
accctgaggcacaaactaactgtcatgtacagtcagatcaacggggcgtcgagagcactg
gatgatgtgagaaacaggcagcaggatgtgcggatgactgcaaacagaaaggtggagcag
ctacaacaagaatacacggaaatgaaggctctcttggacgcctcagagaccacctcgaca
aggaagataaaggaagaggagaagagggtcaacagcaagtttgacaccatttatcagatt
ctcctcaagaagaagagtgagatccagaccttgaaggaggagattgaacagagcctgacc
aagagggatgagttcgagtttctggagaaagcatcaaaactgcgaggaatctcaacaaag
ccagtctacatccccgaggtggaactgaaccacaagctgataaaaggcatccaccagagc
accatagacctcaaaaacgagctgaagcagtgcatcgggcggctccaggagcccaccccc
agttcaggtgaccctggagagcatgacccagcgtccacacacaaatccacacgccctgtg
aagaaggtctccaaagaggaaaagaaatccaagaaacctccccctgtccctgccttaccc
agcaagcttcccacgtttggagccccggaacagttagtggatttaaaacaagctggcttg
gaggctgcagccaaagccaccagctcacatccgaactcaacatctctcaaggccaaggtg
ctggagaccttcctggccaagtccagacctgagctcctggagtattacattaaagtcatc
ctggactacaacaccgcccacaacaaagtggctctgtcagagtgctatacagtagcttct
gtggctgagatgcctcagaactaccggccgcatccccagaggttcacatactgctctcag
gtgctgggcctgcactgctacaagaaggggatccactactgggaggtggagctgcagaag
aacaacttctgtggggtaggcatctgctacggaagcatgaaccggcagggcccagaaagc
aggctcggccgcaacagcgcctcctggtgcgtggagtggttcaacaccaagatctctgcc
tggcacaataacgtggagaaaaccctgccctccaccaaggccacgcgggtgggcgtgctt
ctcaactgtgaccacggctttgtcatcttcttcgctgttgccgacaaggtccacctgatg
tataagttcagggtggactttactgaggctttgtacccggctttctgggtattttctgct
ggtgccacactctccatctgctcccccaaaaatgtgaaaggtcatgagctcatccaggac
ttgctatcctccctgcatttagacagttcctacccacctgatgctggcctgtctgatgat
gatgagcctcccaatgccagcctgccccccgacccgccactcctcactgtgccccagatg
cacagtgtttgtgaccagtggctgcaggatgccttccacatcagcctctga

>gi568815581f:56878160_57106232|GENSCAN_predicted_peptide_2|468_aa
MAASETVRLRLQFDYPPPATPHCTAFWLLVDLNRCRVVTDLISLIRQRFGFSSGAFLGLY
LEGGLLPPAESARLVRDNDCLRVKLEERGVAENSVVISNGDINLSLRKAKKRAFQLEEGE
ETEPDCKYSKKHWKSRENNNNNEKVLDLEPKAVTDQTVSKKNKRKNKATCGTVGDDNEEA
KRKSPKKKEKCEYKKKAKNPKSPKVQAVKDWANQRCSSPKGSARNSLVKAKRKGSVSVCS
KESPSSSSESESCDESISDGPSKVTLEARNSSEKLPTELSKEEPSTKNTTADKLAIKLGF
SLTPSKGKTSGTTSSSSDSSAESDDQCLMSSSTPECAAGFLKTNPVETPKKDYSLLPLLA
AAPQVGEKIAFKLLELTSSYSPDVSDYKEGRILSHNPETQQVDIEILSSLPALREPGKFD
LVYHNENGAEVVEYAVTQESKITVFWKELIDPRLIIESPSNTSSTEPA

>gi568815581f:56878160_57106232|GENSCAN_predicted_CDS_2|1407_bp
atggcagcttccgagacggttaggctacggcttcaatttgattacccgccgccagctacc
ccgcactgtacggccttctggcttctggtcgacttgaacagatgccgagtcgtcacagat
ctcattagtctcatccgccagcgcttcggcttcagttctggggccttcctaggcctctac
ctggagggggggctcttgccccccgccgagagcgcgcgccttgtgagagacaacgactgc
ctcagagttaaattagaagagagaggagttgctgagaattctgtagtcatcagtaatggt
gacattaatttatctcttagaaaagcaaagaagcgggcatttcagttagaggagggtgaa
gaaactgaaccagattgcaaatattcaaagaagcattggaagagtcgagagaacaataac
aataatgagaaggtcttggatctggaaccaaaagctgtcacagatcagactgtcagcaaa
aaaaacaagagaaaaaataaagcaacctgtggcacagtgggtgatgataacgaagaggcc
aaaagaaaatcaccaaagaaaaaggagaaatgtgaatataaaaaaaaggctaagaatccc
aagtctccgaaagtacaggcagtgaaagactgggccaatcagagatgtagttctccaaaa
ggttctgctagaaacagccttgttaaagccaaaaggaaaggtagtgtaagcgtttgctca
aaagagagtcccagttcctcctcggagtctgaatcttgtgatgaatctatcagtgatggt
cccagcaaagtcactttggaggccagaaattcctcagagaaattaccaactgagttatca
aaggaagaaccctctaccaaaaatacaactgcagacaaactggctataaaacttggcttt
agccttacccccagcaagggcaagacctctggaacaacatcttccagttcagactctagt
gcagagtcagacgaccaatgcttgatgtcatcgagcaccccggagtgtgctgcgggtttc
ttaaagacaaatccagtagagacacccaagaaggactatagtctgttaccactgttagca
gctgcccctcaagttggagaaaagattgcatttaagcttttggagctaacatccagttac
tctcctgatgtctctgactacaaggaaggaagaatattaagccacaatccagagacccag
caagtagatatagaaattctttcatccttacctgccttgagagaacctgggaaatttgat
ttagtttatcacaatgaaaatggagccgaggtagtggagtacgctgtgacacaggagagc
aagatcactgtattttggaaagagttgattgacccaagactgattattgaatctccaagt
aacacatcaagtacagaacctgcctga

>gi568815581f:56878160_57106232|GENSCAN_predicted_peptide_3|416_aa
MELALRRSPVPRWLLLLPLLLGLNAGAVIDWPTEEGKEVWDYVTVRKDAYMFWWLYYATN
SCKNFSELPLVMWLQGGPGGSSTGFGNFEEIGPLDSDLKPRKTTWLQAASLLFVDNPVGT
GFSYVNGSGAYAKDLAMVASDMMVLLKTFFSCHKEFQTVPFYIFSESYGGKMAAGIGLEL
YKAIQRGTIKCNFAGVALGDSWISPVDSVLSWGPYLYSMSLLEDKGLAEVSKVAEQVLNA
VNKGLYREATELWGKAEMIIEQRHVRHLQRDALSQLMNGPIRKKLKIIPEDQSWGGQATN
VFVNMEEDFMKPVISIVDELLEAGINVTVYNGQLDLIVDTMGQEAWVRKLKWPELPKFSQ
LKWKALYSDPKSLETSAFVKSYKNLAFYWILKAGHMVPSDQGDMALKMMRLVTQQE

>gi568815581f:56878160_57106232|GENSCAN_predicted_CDS_3|1251_bp
atggagctggcactgcggcgctctcccgtcccgcggtggttgctgctgctgccgctgctg
ctgggcctgaacgcaggagctgtcattgactggcccacagaggagggcaaggaagtatgg
gattatgtgacggtccgcaaggatgcctacatgttctggtggctctattatgccaccaac
tcctgcaagaacttctcagaactgcccctggtcatgtggcttcagggcggtccaggcggt
tctagcactggatttggaaactttgaggaaattgggccccttgacagtgatctcaaacca
cggaaaaccacctggctccaggctgccagtctcctatttgtggataatcccgtgggcact
gggttcagttatgtgaatggtagtggtgcctatgccaaggacctggctatggtggcttca
gacatgatggttctcctgaagaccttcttcagttgccacaaagaattccagacagttcca
ttctacattttctcagagtcctatggaggaaaaatggcagctggcattggtctagagctt
tataaggccattcagcgagggaccatcaagtgcaactttgcgggggttgccttgggtgat
tcctggatctcccctgttgattcggtgctctcctggggaccttacctgtacagcatgtct
cttctcgaagacaaaggtctggcagaggtgtctaaggttgcagagcaagtactgaatgcc
gtaaataaggggctctacagagaggccacagagctgtgggggaaagcagaaatgatcatt
gaacagcgccacgtgagacacctacaacgagatgccttaagccagctcatgaatggcccc
atcagaaagaagctcaaaattattcctgaggatcaatcctggggaggccaggctaccaac
gtctttgtgaacatggaggaggacttcatgaagccagtcattagcattgtggacgagttg
ctggaggcagggatcaacgtgacggtgtataatggacagctggatctcatcgtagatacc
atgggtcaggaggcctgggtgcggaaactgaagtggccagaactgcctaaattcagtcag
ctgaagtggaaggccctgtacagtgaccctaaatctttggaaacatctgcttttgtcaag
tcctacaagaaccttgctttctactggattctgaaagctggtcatatggttccttctgac
caaggggacatggctctgaagatgatgagactggtgactcagcaagaatag

>gi568815581f:56878160_57106232|GENSCAN_predicted_peptide_4|265_aa
MHHLNVDRYGTTATLQDSPERCSAELSCSPFPRILLEHVCFPGQHSQPSMVFVLFSRNSL
IAGLSLVHRCGPGIWHVSRPPLENADQHLFTLPQGYGQFAFGIFDDSFEIPTFSPGAQAD
GSKDPERPWETEHQSRPLANGLDAFAQLLNQFENTGPPPADEEKIQYLPTVPVTEEHVGS
GLECPVCKDDYALGEQLPRNHLFHDGCIVHRLEQHDSCPVCRKSLPGHNTATNTPAPGPT
GMNCSSSSSSPSSSSPSKENATSNS

>gi568815581f:56878160_57106232|GENSCAN_predicted_CDS_4|798_bp
atgcatcacctgaatgtggaccgctatggcaccacggccacactccaggacagccctgaa
agatgctcagctgagctcagctgctcccccttcccccggatcctcctagagcatgtctgc
ttcccgggccagcacagccagccaagtatggtgtttgtcctgttttctagaaactccttg
atagcaggcttaagtctggttcatcgatgtggccctggcatctggcacgtaagccggccg
ccgttggagaacgcggaccagcacctgttcacgctgccgcagggctacggacagtttgct
ttcggcatctttgacgacagcttcgagatccccacgttctctcctggggcgcaggctgac
ggcagcaaggaccctgagagaccgtgggagacagagcatcagtcccggcccctggccaac
ggcctggacgccttcgcacagctcctcaatcagtttgaaaacacgggccccccaccggca
gatgaagagaaaatccagtacctccccaccgtccccgtcaccgaggagcacgtaggctcc
gggctcgagtgccccgtgtgcaaggacgactacgcgctgggcgagcagctgccccgcaac
cacctgttccacgatggctgcatagtgcaccggctggagcagcacgacagctgccccgtc
tgccgaaaaagcctcccgggacacaacacggccacgaacacccccgccccgggcccgact
gggatgaactgctcctcctcgtcgtcctccccctcctccagctcgcccagtaaagagaac
gccacaagtaactcctga

>gi568815581f:56878160_57106232|GENSCAN_predicted_peptide_5|481_aa
MEKITWIRKTKREVPAASQNSPQKSNGLTLNSADKPGNCRLQPSAKQENKSLAMSSCQEL
GTLSQPNSQKEGQKLNPVVSEYLLGKAFYGQNENPESTTRCSRPSCLLTSATQLKAQSMP
SKVPVPAWIGWLLVGHKPRTPSQQATERWAPPRQGNQPRKEGHWIQKRDKRRGEGIPRLK
GKQSQGKGMRPGETWNRCEYLGLRMQIPPETPLSLRPPDPNSVRTVPQPETRLDHNRPMS
RPIFPVPLARRTELPGAAPAGEPRAPHRPDPAAFGSPAGGPRRSCPRPTSSSATIGVRDA
ESARRRRPPAVPRGPARSAALPQLPHVLAQAESRHLSGARERGRAGRYSNRRNLDSLPRK
PSTGFAALSRRVNQAISCLGTESALEKAEGPTLVTQERWQDFHPSHLTWNPWINQLPLEA
NPETKGAVYTETVAEVTLKPYWIVPDLLLPAHMPLVPVKYSRTLPEENPALNYPEPVWFG
L

>gi568815581f:56878160_57106232|GENSCAN_predicted_CDS_5|1446_bp
atggaaaaaatcacctggatacgtaaaacaaaaagggaggtacctgcagcttctcagaac
agccctcagaaaagtaatggcctcactctcaactcagctgacaaacctggtaactgcagg
ctacagccttctgctaaacaagaaaacaaatccctggcaatgagcagctgtcaggaactc
gggacactttcccagcccaattcacagaaggaaggccagaagcttaacccagtagtgtct
gagtacctgcttggcaaagccttctacggccaaaatgaaaaccctgaatccactaccagg
tgctctaggcctagttgtctgctgacttcagccacccaactgaaggcccaatccatgcct
tcaaaggtgcctgtccctgcatggatcggctggcttcttgtgggccacaaaccacgcaca
ccttctcagcaagctactgaacgatgggctcccccaagacaaggaaatcaaccaagaaag
gaggggcactggatccagaaacgagacaagagaaggggagagggaattccaaggctgaag
gggaagcagagccagggaaaagggatgcgcccaggagaaacgtggaaccgttgcgagtac
ctggggctacgaatgcaaattccccccgagacgcccctgagcctccgacctccagacccc
aattcggttcgaacggtccctcagcccgaaacacggttggatcacaaccggccgatgtcc
cggcccatcttcccagttcccctggctcgccgcacggaactcccaggggctgcgccggcg
ggcgagccgagggctccccatcgccccgaccccgccgccttcgggtctccggcagggggt
ccccggcgcagctgcccccgacctaccagctcctcggctaccatcggggtgcgggatgcg
gagtccgcgcgccgccgccggcccccggctgtgccccgcggcccggcccgcagcgccgcg
cttccgcagctcccccacgtgctagcccaggcggagagccgtcatctctccggtgcccgg
gagaggggccgggcgggacggtacagcaaccggaggaaccttgattccctgccccgcaag
cccagcaccggttttgccgccttgtctcgaagggtcaaccaggccatctcctgcctcggg
acggagagcgccctggaaaaggcggaggggccgaccttagtcacacaagagcgatggcaa
gattttcacccaagccatctgacttggaacccatggattaaccaactgccactggaggca
aatccagagaccaagggagcagtttatacagaaacagttgcagaagtcactctaaaaccc
tactggattgtcccagaccttctgctcccagctcatatgcctttggttcctgtcaagtat
tccaggacactgccagaagagaaccctgccctgaactaccctgaacctgtctggtttggg
ctctga

>gi568815581f:56878160_57106232|GENSCAN_predicted_peptide_6|252_aa
MAIQFRSLFPLALPGMLALLGWWWFFSRKKGHVSSHDEQQVEAGAVQLRADPAIKEPLPV
EDVCPKVVSTPPSVTEPPEKELSTVSKLPAEPPALLQTHPPCRRSESSGILPNTTDMRLR
PGTRRDDSTKLELALTGGEAKSIPLECPLSSPKGVLFSSKSAEVCKQDSPFSRVPRKVQP
GYPVVPAEKRSSGERARETGGAEGTGDAVLGEKVLEEALLSREHVLELENSKGPSLASLE
GEEDKGKSSSSQ

>gi568815581f:56878160_57106232|GENSCAN_predicted_CDS_6|756_bp
atggcaatccagttccgttcgctcttccccttggcattgcctgggatgctggcgctcctc
ggctggtggtggtttttctctcgtaaaaaaggccatgtcagcagccatgatgagcagcag
gtggaggctggtgctgtgcagctgagggctgaccctgccatcaaggaacctctccccgtg
gaagacgtctgtcccaaagtagtgtccacaccccccagtgtcacagagcctccagaaaag
gaactgtccaccgtgagcaagctgcctgcagagcccccagcattgctccagacacaccca
ccttgccgaagatcagagtcctcgggcattcttcctaacaccacagacatgagattgcga
ccaggaacacgcagagatgacagtacaaagctggagctagccctgacaggtggtgaagcc
aaatcgattcctctagagtgccccctttcatccccaaagggtgtactattctccagcaaa
tcagctgaggtgtgtaagcaagattcccccttcagcagggtgccaaggaaggtccagcca
ggctaccccgtagtccccgcagagaagcgtagctctggggagagggcaagagagacaggt
ggggccgaagggactggtgatgccgtgttgggggaaaaggtgcttgaagaagctctgttg
tctcgggagcatgtcttggaattggagaacagcaagggccccagcctggcctctttagag
ggggaagaagataaggggaagagcagctcatcccag