GENSCAN 1.0	Date run:  6-Nov-116	Time: 13:49:41

Sequence gi568815581f:46772516_46976715 : 204200 bp : 50.37% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.11 Intr -   1394   1153  242  1  2  115   79   394 0.875  38.39
 1.10 Intr -   9980   9902   79  0  1  127   49    27 0.001   1.31
 1.09 Intr -  28746  28699   48  1  0   68   94    30 0.029   0.25
 1.08 Intr -  32588  32540   49  2  1   47  101    44 0.071  -0.15
 1.07 Intr -  43424  43370   55  1  1  103   51    74 0.298   4.18
 1.06 Intr -  46290  46003  288  2  0   74   83   111 0.235   5.56
 1.05 Intr -  47488  47406   83  1  2  106   37    49 0.134   0.04
 1.04 Intr -  47796  47649  148  2  1  110   47    74 0.199   5.74
 1.03 Intr -  53209  53047  163  2  1   70   67   106 0.609   5.73
 1.02 Intr -  59047  58933  115  1  1  103   92    78 0.988   9.72
 1.01 Init -  70351  70316   36  1  0   73   40    79 0.476   1.61
 1.00 Prom -  72235  72196   40                              -4.16

 2.00 Prom +  77180  77219   40                              -4.96
 2.01 Init +  79124  79200   77  1  2   90   60   285 0.999  24.46
 2.02 Intr +  79529  79684  156  2  0   78   35   123 0.139   5.13
 2.03 Intr +  91419  91655  237  0  0   50   63   149 0.344   5.33
 2.04 Intr + 100002 100258  257  0  2  113   59   209 0.977  17.59
 2.05 Intr + 102586 102851  266  2  2   66  105   353 0.994  32.03
 2.06 Intr + 103730 104033  304  1  1  140   91   280 0.226  29.66
 2.07 Intr + 104753 104960  208  0  1    6  110    90 0.090   1.14
 2.08 Intr + 112009 112103   95  1  2   84   81    58 0.232   4.31
 2.09 Intr + 113378 113448   71  0  2   85   59    57 0.243   1.40
 2.10 Intr + 131021 131159  139  1  1  111   80    77 0.614   9.24
 2.11 Intr + 132893 132989   97  0  1   50   91    34 0.444  -1.03
 2.12 Intr + 134778 134927  150  0  0   50   66    88 0.410   2.08
 2.13 Intr + 135804 135908  105  0  0   53   86    57 0.238   1.33
 2.14 Intr + 157005 157069   65  0  2  123   79    81 0.989   9.06
 2.15 Intr + 158584 158692  109  2  1   69   93    73 0.984   5.24
 2.16 Intr + 159552 159684  133  0  1   66   85    88 0.998   6.95
 2.17 Intr + 162514 162654  141  0  0   99   81    78 0.984   8.75
 2.18 Term + 166084 166245  162  0  0  112   52   283 0.995  25.04
 2.19 PlyA + 168261 168266    6                               1.05

 3.06 PlyA - 168632 168627    6                               1.05
 3.05 Term - 170006 169843  164  0  2   96   54   108 0.726   6.30
 3.04 Intr - 171172 171068  105  2  0   40   77    79 0.532   2.19
 3.03 Intr - 176999 176873  127  2  1   67   20    75 0.518  -1.15
 3.02 Intr - 177808 177717   92  2  2   86   60    70 0.606   3.71
 3.01 Init - 181597 181357  241  1  1   71   13   152 0.256   4.04
 3.00 Prom - 181651 181612   40                              -4.46

 4.02 PlyA - 181768 181763    6                               1.05
 4.01 Sngl - 182938 182288  651  1  0   37   43   205 0.906   7.08

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:46772516_46976715|GENSCAN_predicted_peptide_1|436_aa
MNVDIFQCDSEETLKKASDGPRTEKVTQDLAQPFWTTGRQLRFVLHLSLQRNIYVFGPLM
NDCPQQMASSLQAKTWAAFAHQCSAAKGQLHTELLHEDALKKWTSPAMGWERSRSHDKPR
RLSRPLVPPRPFPRAPCAGSSRVRRGLADQKGQQFPTQRSLLPTGSASFTPDRGCAESWC
LRPRALIGCSLTSSNPAAPRWAREGGGCGWRCASDKPESHFQSQVDFVPTIGGVAPPLHG
RGQTSSSAPLLMEPHLLGLLLGLLLGGTRVLAGYPIWWCWAQGCVAVNIFADIYLWWVRG
LTDFKNEATYLCAWPLPPCTRSSPNPNMEVSVEGGALLGPGTSWASVQYCPGASRSLALG
QQYTSLGSQPLLCGSIPGLVPKQLRFCRNYIEIMPSVAEGVKLGIQECQHQFRGRRWNCT
TIDDSLAIFGPVLDKX

>gi568815581f:46772516_46976715|GENSCAN_predicted_CDS_1|1308_bp
atgaatgtggacatcttccagtgtgattcagaagagaccctgaagaaagcctctgatggg
cctagaacagagaaggtgacccaggaccttgcccagcctttctggacaactggaagacag
ttacgcttcgtcctccacctctccctccaacgaaacatttacgtatttggtcctctgatg
aatgactgtccccagcagatggcaagttccttgcaggccaaaacctgggctgcttttgct
catcagtgctcagctgccaaggggcagctgcacacagagttgctccatgaagatgcgttg
aagaaatggaccagtccagcaatgggctgggaacgcagcaggagccatgacaagcccagg
cggctctcccgacccttggtgcccccgaggccatttccccgcgctccctgtgccggcagc
agccgcgtgcggagagggctcgccgaccagaaggggcagcagttccctacacagcggtcc
ctgctccccaccggcagtgcttccttcaccccagaccggggctgcgcagagtcctggtgc
ctcaggccgcgggcgctgattggctgctcgctgacatcctcaaacccggctgctccgcgc
tgggctcgggaggggggcggctgcgggtggaggtgcgcttctgacaagcccgaaagtcat
ttccaatctcaagtggactttgttccaactattgggggcgtcgctccccctcttcatggt
cgcgggcaaacttcctcctcggcgcctcttctaatggagccccacctgctcgggctgctc
ctcggcctcctgctcggtggcaccagggtcctcgctggctacccaatttggtggtgctgg
gcccagggctgtgtggctgtgaatatctttgcagacatctacctgtggtgggttcgtggt
ctcactgacttcaagaatgaagccacgtacctttgcgcctggcccctgccgccctgcacc
cgctcctctcccaaccccaacatggaagtttccgtggagggtggagcccttctgggccca
ggaacaagttgggcctctgtccagtactgcccaggagccagcaggtccctggccctgggc
cagcagtacacatctctgggctcacagcccctgctctgcggctccatcccaggcctggtc
cccaagcaactgcgcttctgccgcaattacatcgagatcatgcccagcgtggccgagggc
gtgaagctgggcatccaggagtgccagcaccagttccggggccgccgctggaactgcacc
accatagatgacagcctggccatctttgggcccgtcctcgacaaagnn

>gi568815581f:46772516_46976715|GENSCAN_predicted_peptide_2|923_aa
MRPPPALALAGLCLLALPAAAASYFGRQSRSLMPSRDPHAGALSAAILASGEPSLPRTPS
PPSAFALRSGDREGWVDGWAKGVGHPWGLQENKWNLQHGTSLPRACANNGTVLIIEGVTH
KAFPRGLALPGPKPSLSLPVRGKRVIGAQGAFKNLSSLTGREVLTPFPGLGTAAAPAQGG
AHLKQCDLLKLSRRQKQLCRREPGLAETLRDAAHLGLLECQFQFRHERWNCSLEGRMGLL
KRGFKETAFLYAVSSAALTHTLARACSAGRMERCTCDDSPGLESRQAWQWGVCGDNLKYS
TKFLSNFLGSKRGNKDLRARADAHNTHVGIKAVKSGLRTTCKCHGVSGSCAVRTCWKQLS
PFRETGQVLKLRYDSAVKVSSATNEALGRLELWAPARQGSLTKGLAPRSGDLVYMEDSPS
FCRPSKYSPGTADGEKAQVVEAIRSEKGELSVLEWTRVRSVPWSPVSLIWLFKYASAEAS
FLSRELGYAHSPSRAQNYHQCSLMTEAQGLVNEVAALPVLTTATVVVLRRLHTESLAAST
TRTKLCRSLNLELLQDEVGLPGTCILIDAVTLTGKQLEGKNHGFHLSGFQYPTPNLAYYR
CSTEFVVPFKDDAWNNPLPARVDSSKKTLFHPSAESRGFLWRKKKRKCHALDPPGKERLT
VAVSTRGTWGQLTLVLQTQVLGSVGRGVLSPYASGSWALPFQSCKMIAINAACLLEALKI
GQVHEIQSCMGRLETADKQSVHIVENEIQASIDQIFSRLERLEILSSKEPPNKRQNARLR
VDQLKYDVQHLQTALRNFQHRRHAREQQERQREELLSRTFTTNDSDTTIPMDESLQFNSS
LQKVHNGMDDLILDGHNILDGLRTQRLTLKGTQKKILDIANMLGLSNTVMRLIEKRAFQD
KYFMIGGMLLTCVVMFLVVQYLT

>gi568815581f:46772516_46976715|GENSCAN_predicted_CDS_2|2772_bp
atgcgccccccgcccgcgctggccctggccgggctctgcctgctggcgctgcccgccgcc
gccgcctcctacttcgggcgtcagtcccgctctctgatgccctctcgggatcctcacgcc
ggtgccctgtctgccgccatcctggcctccggcgagccgtccttgcctcggactccttcc
ccaccctccgccttcgccctgcggagcggagaccgagagggctgggtggatggctgggcg
aagggtgtgggccatccgtggggcctgcaggagaacaagtggaatctgcagcatgggaca
tctctgcctagagcctgtgcaaacaatggcactgtcctcatcattgagggggtcacgcac
aaggcattccccagaggcctggcccttccagggcccaagcccagcctgagcctgcctgtg
cgtgggaagagggtgatcggagcccagggtgcattcaagaacctgtcaagcctgaccggg
cgggaagtcctgacgcccttcccaggattgggcactgcggcagccccggcacagggcggg
gcccacctgaagcagtgtgacctgctgaagctgtcccggcggcagaagcagctctgccgg
agggagcccggcctggctgagaccctgagggatgctgcgcacctcggcctgcttgagtgc
cagtttcagttccggcatgagcgctggaactgtagcctggagggcaggatgggcctgctc
aagagaggcttcaaagagacagctttcctgtacgcggtgtcctctgccgccctcacccac
accctggcccgggcctgcagcgctgggcgcatggagcgctgcacctgtgatgactctccg
gggctggagagccggcaggcctggcagtggggcgtgtgcggtgacaacctcaagtacagc
accaagtttctgagcaacttcctggggtccaagagaggaaacaaggacctgcgggcacgg
gcagacgcccacaatacccacgtgggcatcaaggctgtgaagagtggcctcaggaccacg
tgtaagtgccatggcgtatcaggctcctgtgccgtgcgcacctgctggaagcagctctcc
ccgttccgtgagacgggccaggtgctgaaactgcgctatgactcggctgtcaaggtgtcc
agtgccaccaatgaggccttgggccgcctagagctgtgggcccctgccaggcagggcagc
ctcaccaaaggcctggccccaaggtctggggacctggtgtacatggaggactcacccagc
ttctgccggcccagcaagtactcacctggcacagcagatggggagaaagcacaggtggta
gaagccatccgttcagagaaaggagagctttctgtgcttgagtggacccgagtgagatct
gtgccctggagccctgtgtccttgatttggcttttcaaatatgcctccgctgaggcctca
ttcttgtctcgagagctgggttatgcacactcacccagccgtgctcaaaactaccaccag
tgcagcctgatgacagaggcccagggtttggtaaatgaagttgctgctctgccagtgctg
acaacagccacagtagttgttttgcgcaggcttcatacagaatccctggctgcctcaacc
acaagaacaaagctgtgcagaagcctgaacctggagcttctgcaagatgaggtagggctt
ccaggtacttgtatcctgattgatgctgtcactctcactggaaaacaattggaaggtaag
aaccatggcttccacctctctggattccagtaccctacaccaaatctggcttattatagg
tgctcaacagaatttgtagttccctttaaagatgatgcttggaataacccacttccagca
agagtggacagcagcaagaagactttgtttcatccttcagctgagtcgcggggcttcctt
tggaggaagaagaagcggaaatgtcatgctctggacccacctggtaaagagaggttgacc
gtggcagtgagtactcggggcacctggggccagctgacccttgtgcttcagacacaggtg
ttgggctcggtgggaagaggggtcctctcaccctatgcctcagggtcctgggcgcttccc
tttcaaagctgcaaaatgatcgccattaatgcagcttgtctcctggaggcgctgaaaata
gggcaggtccacgagatccagtcttgcatgggacgcctggagacggcagacaagcagtct
gtgcacatagtagaaaacgaaatccaagcaagcatagaccagatattcagccgtctagaa
cgtctggagattttgtccagcaaggagccccctaacaaaaggcaaaatgccagacttcgg
gttgaccagttaaagtatgatgtccagcacctgcagactgcgctcagaaacttccagcat
cggcgccatgcaagggagcagcaggagagacagcgagaagagcttctgtctcgaaccttc
accactaacgactctgacaccaccataccaatggacgaatcactgcagtttaactcctcc
ctccagaaagttcacaacggcatggatgacctcattttagatgggcacaatattttagat
ggactgaggacccagagactgaccttgaaggggactcagaagaagatccttgacattgcc
aacatgctgggcttgtccaacacagtgatgcggctcatcgagaagcgggctttccaggac
aagtactttatgataggtgggatgctgctgacctgtgtggtcatgttcctcgtggtgcag
tacctgacatga

>gi568815581f:46772516_46976715|GENSCAN_predicted_peptide_3|242_aa
MGKDFMSKTPKAMATKAKIDKWDLIKLKSFRTAKETTISVNRQPTEWEKIFAIYSSDKGL
ISRIYNELKQIYKKKTTPSTTSRLLLTYKRQRVHTLWGPVWREEDPRIQLGNVTHILPTE
RQLGACDHMACDHHGQRSMAEQRPYDFRGLVIETLLALHGGWAQVLSCSRLPDGACAYYV
PGMHKGPCDPSRAPHEKCGRLSGPMVPSWMRGQLLSDSCEAFTVTTAQPLVCIMRINDGE
HK

>gi568815581f:46772516_46976715|GENSCAN_predicted_CDS_3|729_bp
atgggcaaggacttcatgtctaaaacaccaaaagcgatggcaacaaaagccaaaattgac
aaatgggatctaatcaaactaaagagcttccgcacagcaaaagaaactaccatcagcgtg
aacaggcaacctacagaatgggagaaaatttttgcaatctactcatctgacaaagggcta
atatcaagaatctacaatgaactcaaacaaatttacaagaaaaaaacaaccccatcaaca
accagccgcctcctcctcacctacaagaggcagagagtccacactctctggggaccagta
tggagggaagaagacccaagaatccagctggggaatgtgacccacattcttcccactgag
aggcagctgggggcttgtgaccatatggcttgtgatcaccacggccaaaggagtatggca
gaacagaggccctatgacttccgaggcttggtcatagaaactttgctggccctgcatggg
ggatgggctcaagtgctctcctgcagccgcttacccgatggcgcctgcgcctactacgtg
cccgggatgcacaaaggcccctgcgaccccagcagagcaccccacgagaagtgtgggaga
ttaagtgggcccatggttccaagctggatgaggggccagctcctctcggactcctgtgag
gccttcacagtcaccacagctcagccccttgtctgcataatgaggataaatgatggagaa
cataagtga

>gi568815581f:46772516_46976715|GENSCAN_predicted_peptide_4|216_aa
MNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNIRKSINVIQHINRTKDKNHM
IISIDAEKAFDKIQQPFMLKTLNKLGIDGTYLKIIRAIYDKPTANIILNGQKLEAFPLKT
GTRQGCPLSPLLFNIVLEVLARAIRQKEIKGIQLGKEEVKLSLFADDMIVYLENPTVSAQ
NLFKLISNFSKVSGYKINVQKSQAFLYTNNRQPNHE

>gi568815581f:46772516_46976715|GENSCAN_predicted_CDS_4|651_bp
atgaacattgatgcaaaaatcctcaataaaatactggcaaaccgaatccagcagcacatc
aaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaac
atacgaaaatcaataaacgtaatccagcatataaacagaaccaaagacaaaaaccacatg
attatctcaatagatgcagaaaaggcctttgacaaaattcaacaacccttcatgctaaaa
actctcaataaattaggtattgatgggacgtatctcaaaataataagagctatctatgac
aaacccacagccaatatcatactgaatggacaaaaactggaagcattccctttgaaaact
ggcacaagacagggatgcccgctctcaccactcctattcaacatagtgttggaagttctg
gccagggcaatcaggcagaaggaaataaagggtattcaattaggaaaagaggaagtcaaa
ttgtccctgtttgcagatgacatgattgtatatctagaaaaccccactgtctcagcccaa
aatctctttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtgcaa
aaatcacaagcattcttatacaccaataacagacagccaaatcatgagtga