GENSCAN 1.0 Date run: 4-Nov-116 Time: 19:58:13 Sequence gi568815580r:46964409_47028204 : 63796 bp : 55.00% C+G : Isochore 3 (51 - 57 C+G%) Parameter matrix: HumanIso.smat Predicted genes/exons: Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ 1.00 Prom - 326 287 40 4.09 2.02 PlyA - 859 854 6 -0.45 2.01 Sngl - 5450 4287 1164 2 0 85 37 1171 0.942 106.36 2.00 Prom - 55532 55493 40 -8.19 3.02 PlyA - 56049 56044 6 -0.45 3.01 Sngl - 59519 57879 1641 2 0 107 37 1623 0.999 155.01 3.00 Prom - 59845 59806 40 4.09 Suboptimal exons with probability > 0.800 Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ Predicted peptide sequence(s): Predicted coding sequence(s): >gi568815580r:46964409_47028204|GENSCAN_predicted_peptide_2|387_aa MAPADSGPHRDPPTRTAPLPMPEGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQGQPQGEA VGSHSKGHKSSRGASAQKSPPVQESQSERLQAAGADSAGPKTVPSHVFSELWDPSEAWMQ ANYDLLSAFEAMTSQANPEALSAPTLQEEAAFPGRRVNAKMPVYSGSRPACQLQVPTLRQ QCLRVPRNNPDALGDVEGVPYSVLEPVLEGWTPDQPYRTEKDNAALARETDELWRIHCLQ DFKEEKPQEHESWRELYLRLRDAREQRLRVVTTKIRSARENKPSGRQTKMICFNSVAKTP YDASRRQEKSAGAADPGNGEMEPAPKPAGSSQAPSGLGDGDGGSVSGGGSSNRHAAPADK TRKQAAKKVAPLMAKAIRDYKGRFSRR >gi568815580r:46964409_47028204|GENSCAN_predicted_CDS_2|1164_bp atggccccagctgattccggcccccatcgggaccctccaacgcgcaccgctcccctcccg atgcccgagggccctgagcccgctgtgcccggggagcaacccggaagaggccacgctcac gccgctcagggcgggcctctgctgggtcaaggctgccagggccaaccccagggggaagcg gtggggagccacagcaaggggcacaaatcgtcccgcggggcttcggctcagaaatcgcct cctgtccaggaaagccagtcagagaggctgcaggcggccggcgctgattccgccgggccg aaaacggtgcccagccatgtcttctcggagctctgggacccctcagaggcctggatgcag gccaactacgatctgctgtccgcttttgaggccatgacctcccaggcaaacccagaagca ctctccgcgccaacgctccaggaggaagctgctttccctggacgcagagtgaacgctaag atgccggtgtactcgggctccaggcctgcctgccagctccaggtgccgacgctgcgccag cagtgcctccgggtgcctaggaacaatccggacgccctcggcgacgtggaaggggtcccc tactcggttcttgaacccgttctggaagggtggacgcccgatcagccgtaccgcacagag aaagacaatgccgcactcgctcgagagacagatgaattatggaggattcattgcctccag gacttcaaggaagaaaagccacaggagcacgagtcttggcgggagctgtacctgcggctt cgggacgcccgagagcagcggctgcgagtagtgaccacgaaaatccgatccgcacgtgaa aacaaacccagcggccgacagacaaagatgatctgtttcaactctgtggccaagacgcct tatgatgcttccaggaggcaagagaagtctgcaggagccgctgaccccggaaatggagag atggagccagcccccaagcccgcaggaagcagccaggctccctccggcctcggggacggc gacggcggcagcgtgagcggcggcggcagcagcaaccggcacgcggcgcccgcggacaaa acccgaaaacaggctgccaagaaagtggccccgctgatggccaaggcaattcgagactac aagggaagattctcccgacgataa >gi568815580r:46964409_47028204|GENSCAN_predicted_peptide_3|546_aa MAAGSTTLRAVGKLQVRLATKTEPKKLEKYLQKLSALPMTADILAETGIRKTVKRLRKHQ HVGDFARDLAARWKKLVLVDRNTGPDPQDPEESASRQRFGEALQEREKAWGFPENATAPR SPSHSPEHRRTARRTPPGQQRPHPRSPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPM PEGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQGQPQGEAVGSHSKGHKSSRGASAQKSPP VQESQSERLQAAGADSAGPKTVPSHVFSELWDPSEAWMQANYDLLSAFEAMTSQANPEAL CAPALQEEAAFPGRRVNAKMPVYSGSRPACQLQVPTLRQQCLRVPRNNPDALGDVEGVPY SVLEPVLEGWTPDQLYRTEKDNAALARETDELWRIHCLQDFKEEKPQEHESWRELYLRLR DAREQRLRVVTTKIRSARENKPSGRQTKMICFNSVAKTPYDASRRQEKSAGAADPGNGEM EPAPKPAGSSQAPSGLGDGDGGSVSGGGSSNRHAAPADKTRKQAAKKVAPLMAKAIRDYK GRFSRR >gi568815580r:46964409_47028204|GENSCAN_predicted_CDS_3|1641_bp atggcggcagggtccactacgctgcgcgcagtggggaagctgcaggtgcgtctggccact aagacggagccgaaaaagctagagaaatatttgcagaaactctccgccttgcccatgacc gcagacatcctggcggagactggaatcagaaagacggtgaagcgcctgcggaagcaccag cacgtgggcgactttgccagagacttagcggcccggtggaagaagctggtgctcgtggac cgaaacaccgggcctgacccgcaggaccctgaggagagcgcttcccgacagcgcttcggg gaggctcttcaggagcgggaaaaggcctggggcttcccagaaaacgcgacggcccccagg agcccatctcacagccctgagcacagacggacagcacgcagaacacctccggggcaacag agacctcacccgaggtctcccagtcgcgagcccagagccgagagaaagcgccccagaatg gccccagctgattccggcccccatcgggaccctccaacgcgcaccgctcccctcccgatg cccgagggccctgagcccgctgtgcccggggagcaacccggaagaggccacgctcacgcc gctcagggcgggcctctgctgggtcaaggctgccagggccaaccccagggggaagcggtg gggagccacagcaaggggcacaaatcgtcccgcggggcttcggctcagaaatcgcctcct gtccaggaaagccagtcagagaggctgcaggcggccggcgctgattccgccgggccgaaa acggtgcccagccatgtcttctcggagctctgggacccctcagaggcctggatgcaggcc aactacgatctgctgtccgcttttgaggccatgacctcccaggcaaacccagaagcactc tgcgcgccagcgctccaggaggaagctgctttccctggacgcagagtgaacgctaagatg ccggtgtactcgggctccaggcctgcctgccagctccaggtgccgacgctgcgccagcag tgcctccgggtgcctaggaacaatccggacgccctcggcgacgtggaaggggtcccctac tcggttcttgaacccgttctggaagggtggacgcccgatcagctgtaccgcacagagaaa gacaatgccgcactcgctcgagagacagatgaattatggaggattcattgcctccaggac ttcaaggaagaaaagccacaggagcacgagtcttggcgggagctgtacctgcggcttcgg gacgcccgagagcagcggctgcgagtagtgaccacgaaaatccgatccgcacgtgaaaac aaacccagcggccgacagacaaagatgatctgtttcaactctgtggccaagacgccttat gatgcttccaggaggcaagagaagtctgcaggagccgctgaccccggaaatggagagatg gagccagcccccaagcccgcaggaagcagccaggctccctccggcctcggggacggcgac ggcggcagcgtgagcggcggcggcagcagcaaccggcacgcggcgcccgcggacaaaacc cgaaaacaggctgccaagaaagtggccccgctgatggccaaggcaattcgagactacaag ggaagattctcccgacgataa