GENSCAN 1.0	Date run:  4-Nov-116	Time: 19:58:12

Sequence gi568815580r:46862771_46968697 : 105927 bp : 41.85% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   6133   6220   88  0  1   84  116    46 0.727   7.86
 1.02 Intr +   7049   7180  132  0  0   24   69    91 0.515   0.50
 1.03 Intr +   7994   8160  167  0  2  109   45   101 0.336   6.66
 1.04 Intr +  12360  12616  257  2  2   67   87   112 0.265   4.32
 1.05 Intr +  13167  13375  209  0  2   26   32   171 0.436   3.10
 1.06 Term +  26091  26212  122  1  2   89   55    91 0.229   3.56
 1.07 PlyA +  26454  26459    6                               1.05

 2.06 PlyA -  27444  27439    6                              -1.95
 2.05 Term -  27717  27647   71  1  2   30   38   118 0.681  -1.88
 2.04 Intr -  28284  27810  475  0  1  130   97   472 0.902  44.01
 2.03 Intr -  44314  44243   72  1  0  103   30    61 0.217   0.48
 2.02 Intr -  54716  54552  165  2  0   18   98   186 0.063  11.84
 2.01 Init -  57324  57289   36  0  0   71  113    20 0.071   2.87
 2.00 Prom -  57502  57463   40                              -3.95

 3.02 PlyA -  57573  57568    6                               1.05
 3.01 Sngl -  63930  63313  618  0  0   49   49   207 0.767   8.84
 3.00 Prom -  64023  63984   40                              -6.15

 4.02 PlyA -  64557  64552    6                               1.05
 4.01 Sngl -  65435  64986  450  2  0   73   48   498 0.989  40.26
 4.00 Prom -  66930  66891   40                              -2.85

 5.00 Prom +  73179  73218   40                              -6.65
 5.01 Init +  79124  79126    3  1  0   85   89     0 0.349  -0.15
 5.02 Intr +  83109  83243  135  2  0   40   55   136 0.530   5.34
 5.03 Intr +  84084  84153   70  2  1  150   91    55 0.278   9.84
 5.04 Intr +  91182  91267   86  1  2  106   81    41 0.174   3.82
 5.05 Term +  95430  95483   54  2  0   58   47    67 0.097  -3.82
 5.06 PlyA +  95573  95578    6                               1.05

 6.02 PlyA -  95800  95795    6                               1.05
 6.01 Sngl - 101638  99998 1641  1  0  107   37  2042 0.937 195.81
 6.00 Prom - 101964 101925   40                               0.15

 7.03 PlyA - 102497 102492    6                              -0.45
 7.02 Term - 102738 102601  138  0  0   58   54    67 0.391  -2.72
 7.01 Init - 103120 102893  228  1  0   19   23   251 0.278  10.13

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815580r:46862771_46968697|GENSCAN_predicted_peptide_1|324_aa
MMNKPGLSATQVKRILTHHGNQVTLYTNQEYVNDKSPISQEEIDYALYWQQGPILLYPLK
AIGSKPEISSSEEREERSMIQRVAMVVWEREHPPGQNIPAADQKFPAQDPRWVNNNAAHQ
ENMKDLREMFDACSVISYGDERTQRQLSNVDKYLCPYCSESTKYKHGALKSPCGDWTDVW
WTTQYGGWTARPPSSNKLQGLKQKLQLTWSHPIKFSAPYGSGPEGHVNFTSCLSQQGDNL
AFLGDLKGCSEFKPFRELTYQSALIHPQVDVWWYCGGPSLDTLPSCGLVLVHGLRVGDLG
TENLEIKPHIHGQILFDKGAKIIQ

>gi568815580r:46862771_46968697|GENSCAN_predicted_CDS_1|975_bp
atgatgaataaacctggactctcagcaacgcaggtgaaaaggatcctcacacaccatggc
aaccaggtaactctgtacacaaaccaagagtatgtcaatgacaagagtcccatctcccag
gaggaaatagattatgccctgtattggcagcagggacccatccttctttaccccctaaaa
gctataggaagtaagccagaaatcagttcctctgaggaaagggaagaaagaagcatgatc
caaagggttgctatggtagtctgggaacgtgaacatcctcctggccaaaacattcctgca
gccgaccaaaaatttccagcccaagaccctcgatgggtcaataacaatgcagctcaccaa
gagaatatgaaagatctcagggaaatgtttgacgcttgttcagtcatctcatatggagat
gaacgaactcaaaggcagctatcaaatgtagataagtatctatgtccgtactgtagtgag
tcaacaaagtataagcatggagccttaaaaagtccctgtggtgactggacagatgtttgg
tggaccacccaatatggaggatggacagccaggcccccttcttcaaacaagttgcaagga
ctgaaacagaaactccaacttacgtggtcccaccccatcaaattttcggcaccctatggg
tcaggccctgagggccacgtcaattttacctcatgtctctcacaacaaggggacaactta
gcatttcttggagacctaaagggatgcagtgagtttaagccattccgagagctgacctat
cagtctgccctgatccatccgcaagtggatgtatggtggtattgtggcggaccatcactg
gacactctgccaagctgtggactggtgctagtccacggcctgagggttggagaccttgga
acagagaacctggaaataaaacctcacatacatggtcaaatactttttgacaagggtgct
aagatcattcagtga

>gi568815580r:46862771_46968697|GENSCAN_predicted_peptide_2|272_aa
MNAGKQLQRTLHRRRPRRLKRRPVQDGAGGGGGRGGGSVVGGSGSGCGGSGGGARGWYKM
ADFEELRISPGKASRDSALQALLLFRVLVSQNMVSSFRVSELQVLLGFAGRNKSGRKHDL
LMRALHLLKSGCSPAVQIKIRELYRRRYPRTLEGLSDLSTIKSSVFSLDGGSSPVEPDLA
VAGIHSLPSTSVTPHSPSSPVGSVLLQDTKPTFEMQQPSPPIPPVHPDVQLKNLPFYDVL
DVLIKPTSLVKLRHQCRMFEYTDKNSATMTEI

>gi568815580r:46862771_46968697|GENSCAN_predicted_CDS_2|819_bp
atgaatgctgggaagcaactacaaagaacactgcaccggcggcggccgcggcgtcttaag
cggcgcccagtgcaggatggtgctggaggcggcggcggccgtggtggcggcagcgtcgtt
ggcggcagcgggagtgggtgcggcggcagcggcggcggcgcccgcgggtggtataaaatg
gcggatttcgaagagttgaggatatctccggggaaggcatcaagagactcagctttgcag
gctctccttcttttcagagtcttggtgtctcagaatatggtttctagttttagggtttct
gaactacaagtattactaggctttgctggacggaataaaagtggacgcaagcatgacctc
ctgatgagggcgctgcatttattgaagagcggctgcagccctgcggttcagattaaaatc
cgagaattgtatagacgccgatatccacgaactcttgaaggactttctgatttatccaca
atcaaatcatcggttttcagtttggatggtggctcatcacctgtagaacctgacttggcc
gtggctggaatccactcgttgccttccacttcagttacacctcactcaccatcctctcct
gttggttctgtgctgcttcaagatactaagcccacatttgagatgcagcagccatctccc
ccaattcctcctgtccatcctgatgtgcagttaaaaaatctgcccttttatgatgtcctt
gatgttctcatcaagcccacgagtttagtgaaattgaggcatcaatgccgaatgtttgaa
tatacggataaaaattcggcaaccatgactgaaatctaa

>gi568815580r:46862771_46968697|GENSCAN_predicted_peptide_3|205_aa
MGDFHTPLSTLDRSMRQKVSKDTQELNSALHQADLIDIYRTLHLKSTEYTFFSAPHHTYS
KIDHIVGSKALLSKCKRTAIITNCLSDHSAIKLELRIKKLTQNHSTTRKLNNLLLNDYWV
NNKMKAEIKMFFETNEKKHTTYQNLWDTFKAVCRGKFIVLNAHKRKQERSKIDTLTSQLK
ELEKQEQTHSKASRRQEITKIRAEL

>gi568815580r:46862771_46968697|GENSCAN_predicted_CDS_3|618_bp
atgggagactttcacaccccactgtcaacattagacagatcaatgagacagaaagttagc
aaggatacccaggaattgaactcagctctgcaccaagcggacctaatagacatctacaga
actctccacctcaaatcaacagaatatacattcttttcagcaccacaccacacctactcc
aaaattgaccacatagttggaagtaaagcacttctcagcaaatgtaaaagaacagcaatt
ataacaaactgtctctcagaccacagtgcaatcaaactagaactcaggattaagaaactc
actcaaaaccactcaactacaaggaaactgaacaacctgctcctgaatgactactgggta
aataacaaaatgaaggcagaaataaagatgttctttgaaaccaacgagaaaaaacacaca
acataccagaatctctgggacacattcaaagcagtgtgtagagggaaatttatagtacta
aatgcccacaagagaaagcaggaaagatctaaaattgacaccctaacatcacaattaaaa
gaactagaaaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaag
atcagagcagaactgtag

>gi568815580r:46862771_46968697|GENSCAN_predicted_peptide_4|149_aa
MGKKQGRKTGNSKNHSASPPPKERSSSPATEQSWMENDFDELREEGFRRSNYSELQEEIR
TNGKEVKSFEKKLDEWITRITNAEKSLKDLMELKTKAQELRDECRRLSSRCNQLEERVSV
MEHEMNEMKREEKCREKRIKRNEQSLQEI

>gi568815580r:46862771_46968697|GENSCAN_predicted_CDS_4|450_bp
atgggaaaaaaacagggtagaaaaaccggaaactctaaaaatcacagtgcctctcctcct
ccaaaggaacgcagctcctcaccagcaacggaacaaagctggatggagaatgactttgac
gagttgagagaagaaggcttcagacgatcaaactactccgagctacaggaggaaattcga
accaatggcaaagaagttaaaagctttgaaaaaaaattagacgaatggataactagaata
accaatgcagagaagtccttaaaggacctgatggagctgaaaaccaaggcacaagagcta
cgtgacgaatgcagaaggctcagtagccgatgcaatcaactggaagaaagggtatcagtg
atggaacacgaaatgaatgaaatgaagcgagaagagaagtgtagagaaaaaagaataaaa
agaaacgaacaaagcctccaagaaatatag

>gi568815580r:46862771_46968697|GENSCAN_predicted_peptide_5|115_aa
MEVIDDSGKNCFKGAGPECVEKWVEGEEMRKRIASPFRKLALNGRKGPSTVSDGAFLPDP
EIHASGAGSGNKGKISLVASSVGENRGRLCGGESREWKIRTTPSTLLVRGPSDLD

>gi568815580r:46862771_46968697|GENSCAN_predicted_CDS_5|348_bp
atggaagttattgacgactctggaaagaactgcttcaaaggagcaggaccagaatgtgtt
gagaaatgggtggaaggtgaggaaatgaggaagaggatagctagtcctttcagaaagctt
gccctgaatgggagaaagggtcctagcacagtgtctgatggagctttcctaccagaccct
gaaattcacgcatcaggcgcgggaagcgggaataagggcaaaataagtttggttgccagc
agtgttggagagaacagaggaagactttgtgggggtgaaagcagggaatggaagattaga
accacaccatctactctcctggttcgggggccttcagacttggactga

>gi568815580r:46862771_46968697|GENSCAN_predicted_peptide_6|546_aa
MAAGSTTLRAVGKLQVRLATKTEPKKLEKYLQKLSALPMTADILAETGIRKTVKRLRKHQ
HVGDFARDLAARWKKLVLVDRNTGPDPQDPEESASRQRFGEALQEREKAWGFPENATAPR
SPSHSPEHRRTARRTPPGQQRPHPRSPSREPRAERKRPRMAPADSGPHRDPPTRTAPLPM
PEGPEPAVPGEQPGRGHAHAAQGGPLLGQGCQGQPQGEAVGSHSKGHKSSRGASAQKSPP
VQESQSERLQAAVADSAGPKTVPSHVFSELWDPSEAWMQANYDLLSAFEAMTSQANPEAL
SAPTLQEEAAFPGRRVNAKMPVYSGSRPACQLQVPTLRQQCLRVPRNNPDALGDVEGVPY
SALEPVLEGWTPDQPYRTEKDNAALARETDELWRIHCLQDFKEEKPQEHESWRELYLRLR
DAREQRLRVVTTKIRSARENKPSGRQTKMICFNSVAKTPYDASRRQEKSAGAADPGNGEM
EPAPKPAGSSQAPSGLGDGDGGSVSGGGSSNRHAAPADKTRKQAAKKVAPLMAKAIRDYK
GRFSRR

>gi568815580r:46862771_46968697|GENSCAN_predicted_CDS_6|1641_bp
atggcggcagggtccactacgctgcgcgcagtggggaagctgcaggtgcgtctggccact
aagacggagccgaaaaagctagagaaatatttgcagaaactctccgccttgcccatgacc
gcagacatcctggcggagactggaatcagaaagacggtgaagcgcctgcggaagcaccag
cacgtgggcgactttgccagagacttagcggcccggtggaagaagctggtgctcgtggac
cgaaacaccgggcctgacccgcaggaccctgaggagagcgcttcccgacagcgcttcggg
gaggctcttcaggagcgggaaaaggcctggggcttcccagaaaacgcgacggcccccagg
agcccatctcacagccctgagcacagacggacagcacgcagaacacctccggggcaacag
agacctcacccgaggtctcccagtcgcgagcccagagccgagagaaagcgccccagaatg
gccccagctgattccggcccccatcgggaccctccaacgcgcaccgctcccctcccgatg
cccgagggccctgagcccgctgtgcccggggagcaacccggaagaggccacgctcacgcc
gctcagggcgggcctctgctgggtcaaggctgccagggccaaccccagggggaagcggtg
gggagccacagcaaggggcacaaatcgtcccgcggggcttcggctcagaaatcgcctcct
gtccaggaaagccagtcagagaggctgcaggcggccgtcgctgattccgccgggccgaaa
acggtgcccagccatgtcttctcggagctctgggacccctcagaggcctggatgcaggcc
aactacgatctgctgtccgcttttgaggccatgacctcccaggcaaacccagaagcactc
tccgcgccaacgctccaggaggaagctgctttccctggacgcagagtgaacgctaagatg
ccggtgtactcgggctccaggcctgcctgccagctccaggtgccgacgctgcgccagcag
tgcctccgggtgcctaggaacaatccggacgccctcggcgacgtggaaggggtcccctac
tcggctcttgaacccgttctggaagggtggacgcccgatcagccgtaccgcacagagaaa
gacaatgccgcactcgctcgagagacagatgaattatggaggattcattgcctccaggac
ttcaaggaagaaaagccacaggagcacgagtcttggcgggagctgtacctgcggcttcgg
gacgcccgagagcagcggctgcgagtagtgaccacgaaaatccgatccgcacgtgaaaac
aaacccagcggccgacagacaaagatgatctgtttcaactctgtggccaagacgccttat
gatgcttccaggaggcaagagaagtctgcaggagccgctgaccccggaaatggagagatg
gagccagcccccaagcccgcaggaagcagccaggctccctccggcctcggggacggcgac
ggcggcagcgtgagcggcggcggcagcagcaaccggcacgcggcgcccgcggacaaaacc
cgaaaacaggctgccaagaaagtggccccgctgatggccaaggcaattcgagactacaag
ggaagattctcccgacgataa

>gi568815580r:46862771_46968697|GENSCAN_predicted_peptide_7|121_aa
MVLFSSFGLKGESGTRLPKPWHQYQLQARASLSEEILNNRWEQDPEAFLPRLVTGDETWL
YRQDPEDQARSHGYQESVFRKLAKAGAKKVPTRDFFSTTTVFLIMPFFEQGQLGKTCHGK
P

>gi568815580r:46862771_46968697|GENSCAN_predicted_CDS_7|366_bp
atggttctgttttcctcatttggactgaaaggtgagagtggaactcggctgcccaaaccg
tggcaccagtatcagctgcaggccagagcaagcctttccgaggagattttaaacaaccgg
tgggagcaagatcctgaagcatttcttccaagattggtcacaggagatgaaacctggctc
taccggcaggatcctgaagaccaagcacgaagccatggctaccaagagagcgttttcaga
aagttagccaaagctggagcgaagaaggtccccaccagagacttcttctccaccacgaca
gtgttcctgatcatgcctttcttcgaacaagggcagctgggcaagacttgccatgggaaa
ccgtga