GENSCAN 1.0	Date run:  4-Nov-116	Time: 09:47:03

Sequence gi568815580r:45984285_46198231 : 213947 bp : 43.86% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 PlyA -    330    325    6                               1.05
 1.06 Term -   4475   4426   50  0  2  116   38    36 0.440  -1.13
 1.05 Intr -   7918   7822   97  1  1   56   68    90 0.877   3.38
 1.04 Intr -   9419   9321   99  2  0   45  100    86 0.922   5.81
 1.03 Intr -  13544  13429  116  0  2  107   55   148 0.631  13.57
 1.02 Intr -  14555  14510   46  2  1   92   94    42 0.882   3.18
 1.01 Init -  15259  15152  108  1  0   51   75   185 0.987  13.72
 1.00 Prom -  16870  16831   40                              -8.06

 2.00 Prom +  19845  19884   40                              -2.66
 2.01 Init +  29925  29973   49  2  1   96   91    -7 0.112  -0.29
 2.02 Term +  44088  44428  341  1  2   39   40   529 0.127  37.90
 2.03 PlyA +  46052  46057    6                               1.05

 3.05 PlyA -  46296  46291    6                               1.05
 3.04 Term -  55542  55524   19  2  1  107   54    20 0.806  -1.71
 3.03 Intr -  55763  55663  101  2  2  107  102   197 0.847  21.91
 3.02 Intr -  56184  56142   43  2  1   58   94    46 0.108   0.44
 3.01 Init -  62104  62010   95  1  2   71   20   109 0.088   2.26
 3.00 Prom -  74007  73968   40                              -5.46

 4.00 Prom +  76647  76686   40                              -4.46
 4.01 Init +  82245  82316   72  2  0   60  105    10 0.310   0.97
 4.02 Intr +  86652  86786  135  2  0   53   96    68 0.343   4.86
 4.03 Intr +  87566  87641   76  1  1  112   64    37 0.875   2.79
 4.04 Term +  87993  88249  257  1  2   89   36   161 0.821   6.75
 4.05 PlyA +  88718  88723    6                               1.05

 5.11 PlyA -  88907  88902    6                               1.05
 5.10 Term - 100079  99998   82  1  1   90   37    77 0.954  -0.03
 5.09 Intr - 100370 100220  151  0  1  101   80   139 0.999  13.62
 5.08 Intr - 101973 101829  145  0  1   79   87   112 0.969  10.06
 5.07 Intr - 102948 102724  225  0  0   86   67   212 0.985  17.08
 5.06 Intr - 103208 103057  152  0  2   48   48   212 0.999  13.08
 5.05 Intr - 103973 103825  149  1  2   59   67   148 0.999   9.68
 5.04 Intr - 105448 105282  167  1  2   83   38   223 0.998  15.56
 5.03 Intr - 105712 105539  174  1  0   81  100   235 0.999  24.14
 5.02 Intr - 107567 107398  170  0  2   77   94   105 0.189   9.67
 5.01 Init - 113947 113731  217  1  1   84   49   268 0.109  19.36
 5.00 Prom - 114148 114109   40                              -7.96

 6.00 Prom + 114641 114680   40                              -6.76
 6.01 Init + 119942 119995   54  1  0   43   98    49 0.872   2.69
 6.02 Intr + 120910 121084  175  0  1   66  100   142 0.469  12.71
 6.03 Intr + 138372 138421   50  1  2  100  111    -4 0.358   1.50
 6.04 Intr + 141460 141507   48  0  0   80   94    28 0.671   1.48
 6.05 Intr + 142054 142189  136  0  1   66   64    73 0.296   2.84
 6.06 Term + 173206 173495  290  2  2   87   55   100 0.290   2.14
 6.07 PlyA + 175411 175416    6                               1.05

 7.04 PlyA - 176814 176809    6                               1.05
 7.03 Term - 179749 179623  127  0  1   48   49   116 0.726   1.46
 7.02 Intr - 180258 180221   38  0  2  104  113    56 0.719   6.76
 7.01 Init - 181583 181536   48  2  0   70   58    38 0.366  -2.03
 7.00 Prom - 187519 187480   40                              -4.46

 8.03 PlyA - 188716 188711    6                               1.05
 8.02 Term - 189609 188916  694  2  1   67   41   406 0.302  26.84
 8.01 Intr - 190418 190258  161  2  2   88   64    89 0.359   5.29

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  43988  44428  441  1  0  -55   40   607 0.851  36.86
S.002 Term + 113619 114052  434  1  2   92   46   373 0.818  28.96


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815580r:45984285_46198231|GENSCAN_predicted_peptide_1|171_aa
MTKAKKNYEQKCRDKDEAEQAVSRSANLVNPKQQEKLFVKLATSKTAVEDSDKAYMLHIG
TLDKVREEWQSEHIKACEVPVTGSCSGLGWAFEAQECERINFFRNALWLHVNQLSQQCVT
SDEMYEQVRKSLEMCSIQRDIEYFVNQRKTGQIPPDDPNYSLVDDYSLLYQ

>gi568815580r:45984285_46198231|GENSCAN_predicted_CDS_1|516_bp
atgacaaaggcaaagaagaactatgagcagaaatgccgggacaaagatgaggcagaacag
gccgtcagccggagtgccaacctggtgaacccgaagcaacaagaaaagctttttgtgaaa
ctggcaacttcaaagaccgcagtagaggactcagacaaagcatacatgctgcacatcggc
accctggataaggtccgagaagagtggcagagtgagcacatcaaggcctgcgaggtaccc
gtaaccggaagctgctcaggactggggtgggcatttgaggctcaagaatgtgaacgaata
aacttcttccggaatgcattgtggttacatgtgaatcagctgtcacaacaatgtgtcacc
agtgatgaaatgtacgaacaagtccgaaagagtttagaaatgtgcagcattcagagggac
attgaatactttgtgaatcaacgcaaaactggacagattccaccagatgatcccaattac
tctttggttgatgactacagtttgctctatcagtaa

>gi568815580r:45984285_46198231|GENSCAN_predicted_peptide_2|129_aa
MEFYHVGQTSLELLTSAKTAGQAKRGEGRGETAPAAEPPDAGEDKPAVEWCLEELVFGDV
EDDEDTLLRRLRGPWVQGHEDLGDSEAENEAKGNCAPQKKPIWVDEEDEDEEMVDMMNNR
FRKDNDEKC

>gi568815580r:45984285_46198231|GENSCAN_predicted_CDS_2|390_bp
atggagttttaccatgttggccagactagtcttgaactcctgacctcagcgaaaaccgcc
ggccaggccaagcgcggcgagggaagaggagagacggctccggcagcggaaccgcccgac
gctggagaagacaaaccggccgtggagtggtgcctggaggagctggtcttcggcgatgtc
gaggacgacgaggacacgctgctgcggcgtctgcggggtccgtgggttcaaggacatgaa
gacttgggagactcagaagcggagaatgaagcaaaaggtaattgtgcacctcaaaagaag
ccaatttgggtggatgaagaagatgaagatgaggaaatggttgacatgatgaacaatcgg
tttcggaaagataatgatgaaaaatgctag

>gi568815580r:45984285_46198231|GENSCAN_predicted_peptide_3|85_aa
MRGTGWRCSTELDVRMLSSGTRNPVGGFGDCGLSKVNMTVISICYQSADILSTIGYDNII
QHLNNGRKNCKEFEDFLKERLWNDT

>gi568815580r:45984285_46198231|GENSCAN_predicted_CDS_3|258_bp
atgagaggaacgggctggagatgcagcacagaactagatgtgcggatgctcagcagcggg
acccgtaaccctgttggtggctttggagactgcggtctgtcgaaggtcaacatgactgtg
atcagcatttgttatcagagtgcagacatcctcagcaccatcggctatgacaacattatc
caacatctgaacaatggccgcaagaactgcaaagagtttgaagactttctaaaagaaagg
ttatggaatgatacctga

>gi568815580r:45984285_46198231|GENSCAN_predicted_peptide_4|179_aa
MEKKFLSSTSCCVFSVGHKVSHQKSLFPTVPAMGSPSPPFYLKNSQASRESHLWCPWFLC
EAATTLHPREHALLGARAAEGGPWSPSPRDSRARDSTSAFHTRAGKPPPGPKPLPIATAA
VGALRSLRETWAGPSALTRPGAAARTRTQAHLKPHSVGPRSIYQPEASCLLLEVFGYWK

>gi568815580r:45984285_46198231|GENSCAN_predicted_CDS_4|540_bp
atggagaagaagttcctctcttcaacaagttgctgtgttttctccgttggtcacaaggtc
tctcaccagaagagcctttttcccacagtgcctgccatgggatcccccagtcctccattc
tacctgaaaaactcgcaagcctcccgtgagagccatctgtggtgcccttggttcctctgt
gaggctgccaccaccctgcaccctagggagcacgcgctgctgggggcgcgggcggcagag
ggtgggccctggagtccgagcccccgggactcgcgggcacgcgactcaacttctgcgttc
cacactcgcgcagggaagccgcccccgggtcctaaaccactcccgattgcgacggccgcc
gtcggcgctctgcgctccctgcgcgagacctgggcgggaccctcggcgctcacccggcca
ggggctgcagcccgcacccggacccaggcccatttaaagccccacagcgtcgggccacga
tcaatatatcagcccgaagctagctgcctccttctggaagtctttgggtattggaaataa

>gi568815580r:45984285_46198231|GENSCAN_predicted_peptide_5|543_aa
MLSVRVAAAVVRALPRRAGLVSTEGRHDAGGRVGLQGGGAPARALSAGGRGAVANAAILH
PWLLRLDRAGDTGTAEMSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEE
MVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDAL
GNAIDGKGPIGSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDR
QTGKTSIAIDTIINQKRFNDGSDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIV
VSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGR
EAYPGDVFYLHSRLLERAAKMNDAFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQVA
GTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYA
GVRGYLDKLEPSKITKFENAFLSHVVSQHQALLGTIRADGKISEQSDAKLKEIVTNFLAG
FEA

>gi568815580r:45984285_46198231|GENSCAN_predicted_CDS_5|1632_bp
atgctgtccgtgcgcgttgctgcggccgtggtccgcgcccttcctcggcgggccggactg
gtgagcaccgaaggccggcatgatgcaggcggccgggtggggctgcagggtggtggtgcg
ccggctcgggcgctctctgcaggagggcgaggggctgtggcgaatgccgccatcttgcac
ccgtggcttctccggctggacagagcaggcgacacagggactgctgagatgtcctctatt
cttgaagagcgtattcttggagctgatacctctgttgatcttgaagaaactgggcgtgtc
ttaagtattggtgatggtattgcccgcgtacatgggctgaggaatgttcaagcagaagaa
atggtagagttttcttcaggcttaaagggtatgtccttgaacttggaacctgacaatgtt
ggtgttgtcgtgtttggaaatgataaactaattaaggaaggagatatagtgaagaggaca
ggagccattgtggacgttccagttggtgaggagctgttgggtcgtgtagttgatgccctt
ggtaatgctattgatggaaagggtccaattggttccaagacgcgtaggcgagttggtctg
aaagcccccggtatcattcctcgaatttcagtgcgggaaccaatgcagactggcattaag
gctgtggatagcttggtgccaattggtcgtggtcagcgtgaactgattattggtgaccga
cagactgggaaaacctcaattgctattgacacaatcattaaccagaaacgtttcaatgat
ggatctgatgaaaagaagaagctgtactgtatttatgttgctattggtcaaaagagatcc
actgttgcccagttggtgaagagacttacagatgcagatgccatgaagtacaccattgtg
gtgtcggctacggcctcggatgctgccccacttcagtacctggctccttactctggctgt
tccatgggagagtattttagagacaatggcaaacatgctttgatcatctatgacgactta
tccaaacaggctgttgcttaccgtcagatgtctctgttgctccgccgaccccctggtcgt
gaggcctatcctggtgatgtgttctacctacactcccggttgctggagagagcagccaaa
atgaacgatgcttttggtggtggctccttgactgctttgccagtcatagaaacacaggct
ggtgatgtgtctgcttacattccaacaaatgtcatttccatcactgacggacaggtagca
ggtaccatgaagctggaattggctcagtatcgtgaggttgctgcttttgcccagttcggt
tctgacctcgatgctgccactcaacaacttttgagtcgtggcgtgcgtctaactgagttg
ctgaagcaaggacagtattctcccatggctattgaagaacaagtggctgttatctatgcg
ggtgtaaggggatatcttgataaactggagcccagcaagattacaaagtttgagaatgct
ttcttgtctcatgtcgtcagccagcaccaagccttgttgggcactatcagggctgatgga
aagatctcagaacaatcagatgcaaagctgaaagagattgtaacaaatttcttggctgga
tttgaagcttaa

>gi568815580r:45984285_46198231|GENSCAN_predicted_peptide_6|250_aa
MPEPSTSLAQGLNGQESQVAAWLKKIFGDHPIPQYEVNPRTTEILHHLSERNRVRDRDVY
LVIEDLKQKASEYESEARHYYSLFTDERTIEKLNPSLAQVKIEEAKRELWKKGNILRDIE
YSRQKEFAKAYKLKHGGLTQAVASDKVRLLRNMKCLSTCNPECPRRETPGQVIPTGNCNN
DWRVNVDQGVSWGTIQKRRVRKKLQHKMEIRGKNEVSGAIIICLPDAHSKSICRDTGLKQ
RKRFNCSVTE

>gi568815580r:45984285_46198231|GENSCAN_predicted_CDS_6|753_bp
atgccagagccttcgaccagccttgcacaggggctcaacggccaggagtctcaggttgct
gcgtggttaaaaaaaatatttggagatcatcctattccacagtatgaggtgaacccacgg
accacagagattttacatcacctttcagaacgcaacagggtccgggacagggatgtctac
ctggtaatagaggacttgaagcagaaagcaagtgaatacgagtcagaagctaggcattat
tattccctttttacagatgagaggactatagagaagttgaatccgtctcttgctcaagtg
aaaattgaagaagcaaagcgagaactatggaaaaaggggaatatattgagagatatagaa
tattctaggcaaaaagaatttgcaaaggcatataagctgaaacatggaggacttactcaa
gctgtagcaagtgataaagtccggctgcttagaaacatgaaatgtttgtccacatgcaat
ccagagtgtcccaggagggaaaccccggggcaggtgatacctacaggcaactgcaacaat
gactggagggtaaatgtggaccaaggtgtgagctggggcaccatacaaaagagaagggtg
aggaagaagctgcagcacaaaatggagattagagggaaaaacgaggttagtggagccatc
atcatctgcttgcccgatgcacacagcaagtcaatatgccgagacaccgggttgaagcag
agaaagaggtttaactgtagtgtcactgaatga

>gi568815580r:45984285_46198231|GENSCAN_predicted_peptide_7|70_aa
MGFSMLVRLVLSSRPQVAVKAAIPPDTRRTGLNLETHHNSRGGRCRIGTCRMEKLIPKST
KDFLEEEAFD

>gi568815580r:45984285_46198231|GENSCAN_predicted_CDS_7|213_bp
atggggttctccatgttggtcaggctggtcttgagctcccgacctcaggtggcagtcaaa
gcggccattcccccagacaccagaagaacagggctcaacctagaaacacatcacaatagc
agagggggtcgatgcagaatagggacatgtcgcatggagaaattaattcccaagagcacc
aaggacttcttggaagaggaagcttttgactag

>gi568815580r:45984285_46198231|GENSCAN_predicted_peptide_8|284_aa
PGDCGTSSLPSAPPEKDSPQPGPSVWGLGVPEPTPPGREDARVTNGGRARRSERPRGVKA
PAPRASFPRSLLLLRPSPSRNVFPGGWESHSMQAKDNAFSKGQRSLFCALLSTHPLLKPF
RKQLAVSESQSRSSGEPVPFSPRFFADADSWARGDSAELFSGSGTNICSSFCPGTLQALQ
IDRHLLVGRGPLGRPRSAPNSASAVALRFAVSPGEGGGNEVDPNPEEGEEGAGPLAGGAF
PKEEQEMLKTYLKTQDLAKDPRSPKAKQCFEKKNNNNKALRRKM

>gi568815580r:45984285_46198231|GENSCAN_predicted_CDS_8|855_bp
cccggggactgcggcacctccagcctcccctcagcacccccggaaaaggactcgcctcaa
cccggccccagcgtctgggggcttggagtgccggagccaactccgccgggccgggaggac
gctagggtcaccaacggcggacgagcaaggaggtcggagagaccgcggggcgtgaaggcg
ccggctccccgggcttctttcccgcgctccctccttctgttgagaccgtcaccttcccga
aatgtctttcccggggggtgggaaagccactcaatgcaagccaaggacaatgccttcagc
aaaggacagcgctcccttttctgtgcgctgctcagtactcaccccctcctgaagcccttc
cgaaagcagcttgcggtgtctgaatcccagagtcgctccagcggagagcccgtgcccttc
tctccccgctttttcgcggatgccgatagctgggctcggggagactcggctgagctcttc
tcgggcagcggcaccaatatctgctcaagtttctgtccgggcaccttgcaggccttgcag
atcgaccgccacctgctggtgggacgtggcccgctggggagaccccgctctgccccgaat
tccgcctctgcagtcgccctccgatttgcagtcagccctggggagggtgggggaaacgag
gtggacccgaaccccgaagaaggggaggagggcgcaggcccactggcgggtggagcgttt
cccaaggaggagcaggagatgctgaagacatatctcaagactcaagatctggccaaggac
ccgcgctcccccaaagcaaagcagtgttttgagaagaaaaataataataataaagctttg
aggaggaaaatgtaa