GENSCAN 1.0	Date run:  7-Nov-116	Time: 03:09:02

Sequence gi568815580r:26070726_26271286 : 200561 bp : 39.67% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -   3898   3893    6                               1.05
 1.03 Term -  19934  19521  414  2  0   22   34   344 0.591  16.68
 1.02 Intr -  20710  20550  161  2  2   21   69   145 0.381   4.69
 1.01 Init -  28393  28387    7  1  1   62   89     0 0.096  -1.42
 1.00 Prom -  40665  40626   40                              -6.15

 2.00 Prom +  41193  41232   40                              -4.35
 2.01 Init +  50870  51152  283  1  1   83   74   246 0.370  19.95
 2.02 Intr +  52539  52732  194  1  2   17  106    72 0.256   0.19
 2.03 Term +  55687  56103  417  0  0   -7   42   219 0.264   2.09
 2.04 PlyA +  57819  57824    6                               1.05

 3.00 Prom +  61265  61304   40                              -4.45
 3.01 Init +  63241  63342  102  0  0   74   77    96 0.324   7.39
 3.02 Intr +  73834  73960  127  0  1   46   80   121 0.578   6.43
 3.03 Intr +  81133  81257  125  2  2   57  115   101 0.937   9.08
 3.04 Intr +  87397  87519  123  0  0   66  113    93 0.975   9.46
 3.05 Term +  90809  90907   99  1  0   50   54    47 0.307  -5.35
 3.06 PlyA +  91848  91853    6                               1.05

 4.02 PlyA -  92343  92338    6                               1.05
 4.01 Sngl - 100561  99998  564  1  0   73   34   422 0.907  31.19
 4.00 Prom - 103151 103112   40                              -2.35

 5.00 Prom + 103827 103866   40                              -9.85
 5.01 Init + 103958 103960    3  1  0   56   95     0 0.451  -2.45
 5.02 Intr + 108105 108224  120  2  0   70  100   147 0.978  13.87
 5.03 Intr + 108343 108405   63  0  0   71  115    30 0.773   2.00
 5.04 Term + 112756 112923  168  0  0   34   44   140 0.607   1.10
 5.05 PlyA + 112992 112997    6                               1.05

 6.00 Prom + 115980 116019   40                              -5.15
 6.01 Init + 134519 134665  147  1  0   92   29   141 0.953   8.74
 6.02 Intr + 134714 134872  159  1  0  -58  -16   462 0.114  20.46
 6.03 Intr + 139807 139937  131  0  2   63   30    81 0.016  -1.63
 6.04 Term + 156100 156709  610  1  1   75   29   584 0.389  44.18
 6.05 PlyA + 157592 157597    6                               1.05

 7.04 PlyA - 158178 158173    6                               1.05
 7.03 Term - 161739 161560  180  0  0  103   36   122 0.922   5.13
 7.02 Intr - 164306 163339  968  0  2   26   73   575 0.932  39.60
 7.01 Init - 167089 166186  904  1  1   77    0   270 0.692  11.52
 7.00 Prom - 168349 168310   40                              -3.25

 8.02 PlyA - 169110 169105    6                               1.05
 8.01 Sngl - 170120 169485  636  2  0   42   49   276 0.968  15.03
 8.00 Prom - 175270 175231   40                              -3.35

 9.02 PlyA - 175984 175979    6                               1.05
 9.01 Sngl - 185632 185306  327  1  0   50   37   258 0.769  12.66
 9.00 Prom - 189043 189004   40                              -3.25

10.02 PlyA - 190132 190127    6                               1.05
10.01 Term - 198578 198411  168  2  0   65   48   146 0.861   5.20

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 134714 134896  183  1  0  -58   53   444 0.814  22.86


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815580r:26070726_26271286|GENSCAN_predicted_peptide_1|193_aa
MSWFVPRGELFSVRSSQAGRLPLSTGHNLGVPVSGQGYFPIVRHDFVRACETVDSEVVQP
ERPASLPQFAVHPERSGLADSGDGGNMSVAFAAPRQRGKGEITPAAIQKVKPRGVADARP
LPPLGETDAGGRAGPGVDRAEAEAGLLGISSVWEHGLLAVPEWVAEEGEPVFLGVFHAFT
RFSTDTKAQTAAA

>gi568815580r:26070726_26271286|GENSCAN_predicted_CDS_1|582_bp
atgtcttggtttgtcccaagaggcgagctcttctctgtccgctccagccaagctggccga
ttgcccctgagcactggacacaaccttggtgtcccggtttcgggtcagggttactttcca
attgttaggcacgactttgtgcgtgcgtgcgagactgtggactcggaggtggttcagccc
gagaggccggcgtctctcccccagtttgccgttcacccggagcgctcgggacttgccgat
agtggtgacggcggcaacatgtctgtggctttcgcggccccgaggcagcgaggcaagggg
gagatcactcccgctgcgattcagaaggtgaaaccgcgcggggttgcggatgccaggccc
ttaccgcctctgggagagacagacgcggggggaagggccgggcccggagtcgaccgggcc
gaggcggaggcgggcctgctgggaatcagcagtgtttgggaacacggactgctggctgtg
cctgagtgggtggcggaagagggtgaaccggtttttctcggagtctttcacgcatttacg
cgtttttctacagacacaaaagcccaaacagccgccgcctga

>gi568815580r:26070726_26271286|GENSCAN_predicted_peptide_2|297_aa
MAEMTETGFRMWIKMNFSELKEHVATEGKEAKNHDKTMQELTAKIARIERNITDLIELKN
TLQELHNAITSINSRIDQVEKRISELEDCLSEMTAYGTYSKIDHIIGNKTLLSKCKRTEI
ITNSLLDHTRIKLEPKIKKFTQNLTTTWKLNKLLLNDFWKLNKNRKTLHKAKNEDHNYVL
KEWIHWCGSKHMPLNGILIRKQAKIYHDELKTEEDCEYSTSWLQKFKKQHGIKILKLCGD
KVSDDHKAVEKIIHNFAKVIADKNLIPELLLMKILSQNKSIMLIKHHCFGITAPERT

>gi568815580r:26070726_26271286|GENSCAN_predicted_CDS_2|894_bp
atggctgaaatgacagaaacaggcttcagaatgtggataaaaatgaacttcagtgagcta
aaggagcatgttgcaaccgaaggcaaggaagccaagaatcatgataaaacaatgcaagag
ctgacagccaaaatagccagaatagagaggaacataactgacctgatagagctgaaaaac
acactacaagaacttcacaatgcaattacaagcattaacagcagaatagaccaagtggag
aaaagaatctcagagcttgaagactgtctttctgaaatgacagcatatggcacttactct
aaaattgatcacataatcggaaataaaacactcctcagcaaatgtaaaagaaccgaaatc
ataacaaacagtctcttggaccacaccagaatcaaattagaacccaagattaagaaattc
actcaaaaccttacaactacatggaaattaaacaagctgctcctgaatgacttttggaag
ttaaacaaaaatagaaaaacgctacataaagctaaaaatgaggatcacaattatgtattg
aaagagtggatccactggtgtggcagtaaacacatgcctcttaatggtatactgatcagg
aaacaagcaaagatctatcatgatgaactgaaaactgaggaggactgtgaatactcaaca
agctggttgcagaaatttaagaaacaacatggcattaaaattttaaagctctgtggtgat
aaagtatctgatgaccacaaagcagtggaaaaaatcattcacaactttgccaaagtcatt
gctgataaaaatcttatcccagagttactgctgatgaaaatcttatcccagaacaagtct
ataatgctgataaaacatcattgttttggcattactgcaccagaaagaacctga

>gi568815580r:26070726_26271286|GENSCAN_predicted_peptide_3|191_aa
MASRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERT
VRKICALDDHVCMAFAGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKY
TQSNGRRPFGISALIVGFDDDGISRLYQTDPSGTYHAWKFLAQRLCFLEYYDGEESYSGQ
LKWCMAVVLAT

>gi568815580r:26070726_26271286|GENSCAN_predicted_CDS_3|576_bp
atggcgtctcgatatgacagggcgatcactgtcttctccccagacggacacctttttcaa
gttgaatatgcccaggaagcggtgaagaaaggatccaccgcggtcggaattcgaggtacc
aatatagttgttcttggggtagaaaaaaaatctgttgccaagcttcaagatgaaagaact
gtgaggaaaatttgtgcccttgatgaccatgtctgcatggcttttgcaggacttactgct
gatgctagagtagtaataaacagagcccgtgtggagtgccagagccataagcttacggtt
gaggacccagtcactgtagaatacataactcgcttcatagcaactttaaagcagaaatat
acccaaagcaatggacgaagaccttttggtatttctgccttaattgtaggttttgatgat
gatggtatctcaagattgtatcagacagatccttctggtacttatcatgcttggaagttc
cttgctcagaggctatgttttctagaatactatgatggtgaagaaagctattcaggtcag
ctaaagtggtgcatggcagtagtcctagctacttga

>gi568815580r:26070726_26271286|GENSCAN_predicted_peptide_4|187_aa
MVGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFS
IPEKNRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSS
VYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEKGIKYKF
EVYEKND

>gi568815580r:26070726_26271286|GENSCAN_predicted_CDS_4|564_bp
atggttggttcgctaaactgcatcgtcgctgtgtcccagaacatgggcatcggcaagaac
ggggacctgccctggccaccgctcaggaatgaattcagatatttccagagaatgaccaca
acctcttcagtagaaggtaaacagaatctggtgattatgggtaagaagacctggttctcc
attcctgagaagaatcgacctttaaagggtagaattaatttagttctcagcagagaactc
aaggaacctccacaaggagctcattttctttccagaagtctagatgatgccttaaaactt
actgaacaaccagaattagcaaataaagtagacatggtctggatagttggtggcagttct
gtttataaggaagccatgaatcacccaggccatcttaaactatttgtgacaaggatcatg
caagactttgaaagtgacacgttttttccagaaattgatttggagaaatataaacttctg
ccagaatacccaggtgttctctctgatgtccaggaggagaaaggcattaagtacaaattt
gaagtatatgagaagaatgattaa

>gi568815580r:26070726_26271286|GENSCAN_predicted_peptide_5|117_aa
MANAIGRSAKTVREFLEKNYTEDAIASDSEAIKLAIKALLEVVQSGGKNIELAIIRRNQP
LKEFKTLVEEVTADVVQIARELKLEVEPEYATELLQSCDKTDDELLLKDEKRMWFLG

>gi568815580r:26070726_26271286|GENSCAN_predicted_CDS_5|354_bp
atggcaaatgcaataggccgaagtgctaaaactgttcgagaatttctagaaaagaattac
acagaagatgccatagcaagtgacagtgaagctatcaagttagcaataaaagctttgcta
gaagttgtccagtctggtggaaaaaacattgaacttgctataataagaagaaatcaacct
ttgaaggagttcaagactttagtggaggaagtcactgcagatgtggtacaaatagcaaga
gaactaaaattagaagtggagcctgaatatgcaactgaattgctgcaatcttgtgataaa
acagatgatgagttgcttcttaaagatgagaaaagaatgtggtttcttggatga

>gi568815580r:26070726_26271286|GENSCAN_predicted_peptide_6|348_aa
MVFQLKCGSGPVYISGQHLVSVEEDAESEDEEEEDVKLLSISGKQSALERKKKEEEEERR
KKKEEEGGEEEEEEEEEDEEEEEEVEEEEEEEDFDDEETEEKLSGLWTWDLHQQPPQVLR
PSALDGELTHSEASLQVAIMGLLIVVDAVEPEPHRSRLPRAKPPLTSAPGTAAPKLPLSP
WGMPAGLTEPAGAAPPAAVSASGTVTMAPAGALPVRVESTPVALGAVTKAPVSVCVEPTA
SQPLRSPVGTLVTKVAPVSAPPKVSSGPRLPAPQIVAVKAPNTTTIQFPANLQLPPGMLI
TLSSLVCRSSWRRRENSQLQIAPKKTEPREHFIILTLQLTYSFCVITT

>gi568815580r:26070726_26271286|GENSCAN_predicted_CDS_6|1047_bp
atggtctttcagttgaagtgtggttcagggccagtgtatattagtggacagcacttagta
tctgtggaggaagatgcagagtcagaagatgaagaagaggaggatgtgaaactcttaagt
atatctggaaagcaatctgccctggagaggaagaagaaagaggaggaggaggaaagaagg
aagaagaaagaagaagaaggaggagaagaagaagaggaggaggaggaagaggatgaggag
gaagaggaggaggtggaagaggaagaggaagaagaggattttgatgatgaggaaactgaa
gaaaaattatcgggtctttggacctgggacttgcaccagcagcctccccaggttctcagg
ccttcagccttagatggagagttaacccattctgaggccagcttgcaggtggctatcatg
ggacttctcatagttgtcgatgctgtggaacccgaaccgcaccggagtcggctgccgcgc
gccaagcctcccctcacctctgctcccggaaccgcagcgccaaagctgccgctgagcccc
tgggggatgcccgccggcctcaccgaacccgccggcgccgctcccccggctgctgtgagc
gcctcggggaccgtgaccatggccccggccggggcgctgccggtgcgggtggagagcact
ccggtggccctgggcgccgtgactaaggctcctgtcagcgtctgcgtggagcccacggcg
tcccagcccctgcggtcccccgtggggaccctggtgaccaaagtggctccggtcagcgcc
cctcctaaagtcagcagcggccctaggctgcctgctcctcagatagtcgccgtgaaagcc
cccaacaccacgacaatccagtttcctgctaatttgcagcttcctccaggtatgttgata
accctttccagccttgtctgtcggtccagctggcggcgacgggaaaattcgcagctccag
attgctcctaaaaaaactgagccacgggaacatttcataatcttgactttacagttaaca
tattctttttgtgtcattactacatag

>gi568815580r:26070726_26271286|GENSCAN_predicted_peptide_7|683_aa
MAWPQYSLSDGEKWPTEGSINYNTILQFDLFCKREGKWSEVSYVQAFFSLKDNSQLCKAC
NLHPTGGPLSLPPYPSFPTAPLPINDKPPLISPTQKETSKKSPRDHKKNPRLSVTSPSSC
RGREIWPNLDTCPFYLSDLKQIKVDLGKFSDNPDRYIDVLQGLGQTFNLTWRDVLLLLDQ
TLAFNEKNVALAAAQEFEDTWSLSQVNDRITAKERDKFTTSQQAIPSTDPHWDPDSDHGD
WSHKHLLTCVLEGLRRIRKKPMNYSMMSTITQGKEENLTALLQRLREALRKYTPLSPDTL
EVAYLSKEIDVVVKDWPHCLRVVAAVAILVSEGIKITQGKDLTVWTTHDVNGTLRAKGSL
WLSDNCLLRYQALLLKGPVLQICTCAALNPATFLLEDGEPIEHDCQQIVTQTYATQEDLL
EVPLANPDLNLYIDESPFVENGIQRAGYAIVSDVTVLESKPLPPGTSTQLAELVALTRAL
ELGKEKRINVYTDSKYVYLILHAHAAIRKEREFPTSGRTPIKYLKEIMKLLHTVQKPKEV
AVLHCQSHQKGEGEKAEGNRQADAEAKIAARQNLPLGIPMEEPLVWNNPLQEINPQYSLT
ETEWGLSRGHIFLPSGWLTTEEGKDRGHQATDGLTNGTPNELNSQLLLRTPGPTHWPFDW
PREFTSRGHYNCRAPSSPLSSKK

>gi568815580r:26070726_26271286|GENSCAN_predicted_CDS_7|2052_bp
atggcctggccccagtattctctctctgatggggaaaaatggccaactgagggaagtata
aattacaatactatcctgcagtttgaccttttctgtaagagggaaggcaaatggagtgag
gtatcttacgtccaagctttcttttcattgaaggataattcacaactatgcaaagcttgc
aatctacatcccacaggaggacctctcagcttacctccatatcctagcttccctacagct
ccccttcctattaatgataagcctcctctaatctcccccacccagaaggaaacaagcaag
aaatctccaagggaccacaaaaaaaaccccaggctatcggttacatccccttcaagctgt
aggggaagggaaatttggcccaacctggatacatgtcccttctacctctctgatttaaag
cagatcaaggtagacctggggaagttttcagataatcctgataggtatatagatgtccta
cagggtctagggcaaaccttcaacctcacttggagagatgtcttgctattgttagatcaa
accctggcctttaatgagaagaatgtggctttagctgcagcccaagagttcgaagatacc
tggtctcttagtcaagtaaatgacagaataacagccaaagaaagggataaattcactacc
agtcagcaagccatccctagtacggatccccactgggacccagactcagatcatggggac
tggagtcacaaacatctgttgacctgtgttctagaaggactaaggagaattaggaaaaag
cccatgaattattcaatgatgtccaccataactcagggaaaggaagaaaatcttactgcc
ttgctccagcggctacgggaggccttaagaaaatatactcccctgtcacccgacaccctt
gaggtggcatacctaagtaaggaaattgatgtagtagtaaaagactggcctcactgttta
cgggtagttgcagcggtggccatcttagtatcagagggtatcaaaataacacaaggaaag
gatctcactgtctggactactcatgatgtaaatggcacactacgtgccaaaggaagttta
tggctatcagacaactgcctgcttagataccaggcgctactccttaagggaccggtgctt
caaatatgtacttgtgcagccctcaaccctgctacttttctcctagaggatggagaacca
atcgagcatgactgccaacaaattgtgacccagacttacgccacccaagaggatctctta
gaagtccccttagctaatcctgaccttaacctatatatcgatgaaagtccatttgtggag
aatgggatacaaagggcaggttatgccatagttagtgatgtaacagtacttgaaagtaag
cctcttcccccagggaccagcacccagttagcagaactagtggcacttacccgagcctta
gaactgggaaaggaaaaaagaataaatgtgtatacagatagcaagtatgtttatctaatc
ctacatgcccatgctgcaatacggaaagaaagggagttcccaacctctgggagaaccccc
attaaatacctcaaggaaatcatgaagttattgcacacagtgcaaaaacccaaggaggtg
gcagtcttacactgccaaagccatcaaaaaggtgaaggagaaaaggcagaaggaaaccgt
caggcagacgctgaggccaaaattgctgccaggcagaatctcccattaggaatacctatg
gaggaacccttggtatggaacaaccctctccaagagattaacccccagtattccctgact
gaaacagaatggggactttcacgggggcatatttttctcccctcggggtggttaacaaca
gaagagggaaaggatcgaggccatcaagctacagatggtcttacaaatggcaccccaaat
gagctcaactcacaacttctactgaggacccctggaccaacccactggccctttgactgg
cctagagaattcacctccagaggacactacaactgcagggccccttcttcgcccctatcc
agcaagaagtaa

>gi568815580r:26070726_26271286|GENSCAN_predicted_peptide_8|211_aa
MIISIDVEKAFDKLQQPFMLKTLNKLGIDVTYLKIIRAIYDKLTANIILNVQKLEAFPLK
TGTRQGCPLSPLLFNIVLEVLARAIRQEKERKGIQLGKEEVKLSLFADDMIVYLENPIVS
AQNLLKLTSNFSKVSGYKTNVQKSQAFLYTNNRQTESQILRELPFTIASKRIKYLGIQLT
RDVKDLFKENYKPLLNEIKEDTNGRTFHAHG

>gi568815580r:26070726_26271286|GENSCAN_predicted_CDS_8|636_bp
atgattatctcaatagatgtggaaaaggcctttgacaaacttcaacagcccttcatgcta
aaaactctcaataagttaggtattgatgtgacgtatctcaaaataataagagctatttat
gacaaactcacagccaatatcatactgaatgtacaaaaactggaagcattccctttgaaa
actggcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagtt
ctggccagggcaatcaggcaggagaaagaaagaaagggtattcaattaggaaaagaggaa
gtcaaattgtccctgtttgcagatgacatgattgtatatttagaaaaccccattgtctca
gcccaaaatctccttaagctgacaagcaacttcagcaaagtctcaggatacaaaaccaat
gtgcaaaaatcacaagcattcctatacaccaataacagacaaacagagagccaaatcctg
agggaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttaca
agggacgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagag
gacacaaatggaagaacattccatgctcatggatag

>gi568815580r:26070726_26271286|GENSCAN_predicted_peptide_9|108_aa
MFGFHTPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFHSCSGLHETPSGDICNACVLLV
KRWKKLPAGSKKKLESCGRCKGWTQSKDYIETKESDSIWEQDKEQPYQ

>gi568815580r:26070726_26271286|GENSCAN_predicted_CDS_9|327_bp
atgtttggttttcacacgccaaagatgtaccgaagtatagagggctgctgtatttgcaga
gctaagtcctctagttctcgattcactgacagtaaacgctatgaaaaggacttccacagc
tgttctggattgcatgagactccttcaggagacatctgcaatgcctgtgtcctgcttgtg
aaaagatggaagaagttgccagcaggatcaaaaaaaaaactggaatcatgtggtagatgc
aagggctggacccagtctaaagactacattgaaaccaaagaaagtgactctatctgggaa
caagataaagagcaaccatatcagtaa

>gi568815580r:26070726_26271286|GENSCAN_predicted_peptide_10|55_aa
DKPIDQGIKEKKHEWPPLTITHNKHSLEDFVFPISAHRKQTPLPEDKARVPVNRH

>gi568815580r:26070726_26271286|GENSCAN_predicted_CDS_10|168_bp
gacaaacccatagatcaaggaatcaaggagaagaagcatgaatggcccccacttaccatc
actcacaacaaacactcactggaggactttgtgtttcccatttctgcccacaggaagcaa
acacctctaccagaggacaaagcaagagttcctgtaaatagacactaa