GENSCAN 1.0	Date run:  5-Nov-116	Time: 18:21:15

Sequence gi568815580f:31992777_32229184 : 236408 bp : 41.26% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   8255   8312   58  1  1   42  114    23 0.912   1.82
 1.02 Intr +   9147   9322  176  1  2  135   50    27 0.884   2.34
 1.03 Intr +   9516   9623  108  2  0   12   80   120 0.869   3.16
 1.04 Intr +  10297  10378   82  0  1   61  110   127 0.960  10.49
 1.05 Intr +  11895  12061  167  1  2   51   65    82 0.380   0.96
 1.06 Term +  13492  13551   60  0  0  102   45    37 0.337  -2.37
 1.07 PlyA +  15240  15245    6                               1.05

 2.00 Prom +  18435  18474   40                              -6.65
 2.01 Init +  26088  26251  164  2  2   85   86   260 0.996  22.75
 2.02 Term +  26490  27084  595  0  1   57   37   190 0.765   3.81
 2.03 PlyA +  28273  28278    6                               1.05

 3.05 PlyA -  29375  29370    6                               1.05
 3.04 Term -  34378  34305   74  2  2   96   29    30 0.282  -5.01
 3.03 Intr -  34896  34847   50  2  2   66   92    94 0.435   5.01
 3.02 Intr -  41595  41522   74  0  2   83   67   115 0.482   6.19
 3.01 Init -  45124  44930  195  1  0   42   52   127 0.093   2.64
 3.00 Prom -  48596  48557   40                              -2.65

 4.04 PlyA -  48655  48650    6                               1.05
 4.03 Term -  56078  55789  290  0  2   77   38   102 0.927  -1.35
 4.02 Intr -  56440  56324  117  2  0   71   86   167 0.512  14.32
 4.01 Init -  62683  62674   10  1  1   73   74     3 0.288  -1.85
 4.00 Prom -  66642  66603   40                              -3.05

 5.00 Prom +  69845  69884   40                              -4.15
 5.01 Init +  70159  70212   54  0  0   56   90    48 0.757   1.13
 5.02 Intr +  73126  73233  108  0  0   93   92   107 0.997  11.16
 5.03 Term +  75522  75608   87  2  0   85   28   101 0.972   0.48
 5.04 PlyA +  76720  76725    6                               1.05

 6.02 PlyA -  76976  76971    6                               1.05
 6.01 Sngl -  83496  83284  213  0  0   90   40   231 0.996  13.43
 6.00 Prom -  86257  86218   40                              -6.95

 7.03 PlyA -  89646  89641    6                               1.05
 7.02 Term -  99402  99129  274  2  1   73   45   163 0.172   4.46
 7.01 Init - 100002  99953   50  0  2  101   51    64 0.312   4.50
 7.00 Prom - 115061 115022   40                              -6.05

 8.00 Prom + 115391 115430   40                              -5.75
 8.01 Init + 119006 119143  138  1  0   61   80    58 0.774   2.49
 8.02 Intr + 120969 121084  116  2  2   56  115    58 0.769   3.63
 8.03 Intr + 130742 130798   57  2  0   71  121    44 0.606   3.08
 8.04 Intr + 147470 147672  203  2  2   20    9   262 0.362   9.51
 8.05 Term + 148007 148182  176  0  2  -17   44   202 0.587   2.24
 8.06 PlyA + 149438 149443    6                               1.05

 9.03 PlyA - 150049 150044    6                               1.05
 9.02 Term - 160445 160152  294  2  0   85   37   125 0.197   1.42
 9.01 Init - 185068 184907  162  1  0  107   99    38 0.293   6.58
 9.00 Prom - 185690 185651   40                              -6.15

10.05 PlyA - 186214 186209    6                               1.05
10.04 Term - 191224 190840  385  0  1   68   55   185 0.937   6.58
10.03 Intr - 191530 191403  128  1  2   82   60    66 0.904   1.76
10.02 Intr - 203642 203403  240  2  0   -9   28   309 0.367  12.02
10.01 Init - 204085 203654  432  1  0   75   47   459 0.877  36.16
10.00 Prom - 207241 207202   40                              -6.75

11.00 Prom + 207425 207464   40                              -4.25
11.01 Init + 208880 208886    7  1  1   67   91     0 0.301  -0.60
11.02 Intr + 210117 210234  118  1  1  113  106    78 0.312  10.70
11.03 Intr + 211406 211584  179  2  2   34   88   113 0.919   4.54
11.04 Intr + 214476 214694  219  1  0   72   34   136 0.841   3.95
11.05 Intr + 215343 215495  153  1  0   80   87    75 0.939   5.72
11.06 Intr + 217725 217940  216  1  0  111   82   187 0.998  17.95
11.07 Intr + 220340 220783  444  0  0   52   38   244 0.803   8.25
11.08 Intr + 222306 222485  180  1  0   73   95    73 0.975   5.42
11.09 Intr + 224215 224341  127  2  1   78  110    97 0.999   9.72
11.10 Intr + 224985 225189  205  0  1   76  101   124 0.832  10.78

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815580f:31992777_32229184|GENSCAN_predicted_peptide_1|216_aa
MTSGPQTNQPKEHLTNFKSGCCQVPVLPQPLLPNPIILLSPPLPTPRPGLQFRFATSPPP
PAQQFPLGEVAGAEGIVRPNLTLTTAGFMSQTSRKALEQFPEKIPNGTIRQIPQWLKTDA
ARSPWKPPRPSRMLWVTLTVEERNFLTMQGSSSIINTSLIKTLLKAALLPKEAGVIHCKG
HQKASDPITQGNTYADKGHLRQFIVINQNATRWILA

>gi568815580f:31992777_32229184|GENSCAN_predicted_CDS_1|651_bp
atgacctcgggtcctcagaccaaccaacccaaggaacatctcaccaatttcaaatcgggc
tgctgccaggtcccggttcttcctcagcctctgctccccaatcctataatccttctatca
cctcccctcccaacacccaggcctggcttacagtttcgttttgcgactagccctccccca
cctgcccaacaatttcctcttggagaggtggctggagctgaaggcatagtcaggcccaat
ctcacactgacaaccgccggcttcatgagccagacctccaggaaggcattagagcagttc
cctgagaagatccccaatggaactatcaggcagattccccagtggctgaagactgacgct
gcccgatcgccttggaagccccctagaccatcacggatgctttgggtaactctcacagtg
gaggaaagaaatttcctcactatgcaagggtcctcctccatcattaacacttctttaata
aaaactcttctcaaagccgctttacttccaaaggaagctggagtcattcactgcaagggc
catcagaaggcatcagatcccatcactcagggcaacacttatgctgataagggacacctg
agacagttcatagtaatcaatcaaaatgctacccgttggatattggcttga

>gi568815580f:31992777_32229184|GENSCAN_predicted_peptide_2|252_aa
MGSVLSTDSGKSAPASATARALERRRDPELPVTSFDCAVCLEVLHQPVRTRCGHVSRSPG
AELQRRGSRHGSRPEPGLANWGGCSWLENQRSPRHGKETSSSYKAGAPAKRSYPAEHGRT
GCASLCPRNPGPFCFAGAVHVFPECPQRLVLSKQGSVQSVFPPPPLLPFPNTDTQPLKGQ
VKLELPSDFPQLLEFNNLLGWGLDVSRQAPECTPSKPSHNVTGGGRLPALRTVSPNRRKL
QSKITFSKPHST

>gi568815580f:31992777_32229184|GENSCAN_predicted_CDS_2|759_bp
atgggctccgtgctgagcaccgacagcggcaaatcggcgcccgcctctgccaccgcgcgg
gccctggagcgcaggagggacccggagttgcccgtcacgtccttcgactgcgccgtgtgc
cttgaggtgttacaccagcctgtccggacccgctgtggccacgtctcccgaagcccaggt
gcggaactccagagaaggggatccaggcacgggtcccgcccagagccagggctcgccaac
tggggagggtgctcttggctggagaaccagcgctcgcccaggcacggaaaggaaacgagc
tccagctacaaggcaggggctcccgcaaagcgcagttaccccgctgaacacggtagaacg
ggctgcgcttccctctgccccagaaacccgggtccgttttgttttgctggagctgtgcac
gtgttcccagaatgcccacagaggctcgtcttaagcaaacaaggatctgtgcaaagtgtc
tttccacccccacccctgctaccctttcccaacacagacacccagcccctcaaagggcaa
gtcaaactggagcttccgagtgactttccacagttgttagagtttaacaacctgctaggg
tggggcttggacgttagccgccaagcccctgaatgtactccttcaaaacccagccacaac
gtaacaggaggtggcaggctacctgctttacgcacggtctctccaaaccggcggaaatta
cagagtaaaataactttctcaaaaccgcatagtacttag

>gi568815580f:31992777_32229184|GENSCAN_predicted_peptide_3|130_aa
MFRFCPIRVQFFQSSLRLATFRILLIGAFYRVLIGALYRALIDAFYRALIGAFYRALIGV
FYNPLGLCPAAAAALLKRKTERDAKEITPRANEWDLGTTDEKPAKKGNKTPGDVNPLTQE
GKIKEILGKN

>gi568815580f:31992777_32229184|GENSCAN_predicted_CDS_3|393_bp
atgttccgtttctgtcctatcagagtgcagtttttccaatcctccctgcgattggctact
ttcagaatcctgctgattggtgcgttttacagagtgctgattggtgcactttacagagca
ctgattgatgcgttttacagagcactgattggtgcattttacagagcgctaattggtgtg
ttttacaatcctcttggcttatgtcccgctgcagctgccgccctgctcaagagaaagact
gagcgggatgctaaggagataacgccaagagccaatgaatgggatcttggaacaacggat
gaaaagccagcaaagaaagggaacaagaccccaggagatgtaaatcctttaactcaggaa
ggaaaaataaaagaaatacttggaaaaaattag

>gi568815580f:31992777_32229184|GENSCAN_predicted_peptide_4|138_aa
MCNCQLSSMTLKTCKIMEDLASWATFNLGQTEQHVDWISAGAAPQGPIVKQLPSPVPPTE
QLEQEKPVTIGSAPSTPNKLLLSHSNCQLPRPLRSITNISACFSLELAIDHRGFPHSPGA
RSLYSNSVFVTYQLCDLV

>gi568815580f:31992777_32229184|GENSCAN_predicted_CDS_4|417_bp
atgtgcaactgtcagctgtcttcaatgaccctgaagacctgtaaaatcatggaggaccta
gcttcatgggccaccttcaatttgggccaaactgagcagcatgtggactggatttctgct
ggagcagctccccagggacctattgtgaaacaactccctagcccagttcctcctacagag
caacttgagcaggaaaagcccgtgaccatcggctctgctccctcaacacctaacaagctc
ctacttagccattccaattgccaactccctaggccattaagatcaataacaaatatctct
gcatgcttttctcttgaacttgctatagaccacaggggtttcccacacagccctggagct
agatcactgtattcaaattctgtctttgttacttaccagctgtgtgaccttgtatga

>gi568815580f:31992777_32229184|GENSCAN_predicted_peptide_5|82_aa
MGRVGWLMLVIPALWEAEFCPLCRLIPDENPSSFSGSLIRHLQVSHTLFYDDFIDFNIIE
EALIRRVLDRSLLEYVNHSNTT

>gi568815580f:31992777_32229184|GENSCAN_predicted_CDS_5|249_bp
atgggccgggtggggtggctcatgcttgtaatcccagcactttgggaggcagagttctgt
ccactttgccgtttaatacccgatgagaatccaagcagcttcagtggcagtttaataaga
catctgcaagttagtcacactttgttttatgatgatttcatagattttaatataattgag
gaagctcttatccgaagagtcttagaccggtcacttcttgaatatgtgaatcactcgaac
accacataa

>gi568815580f:31992777_32229184|GENSCAN_predicted_peptide_6|70_aa
MVRINVLADALKSINNAKKRGKHQVLIGPCSKVIIRFLTVIMKHGYIGESEIIDDQSWED
CEPHRQAKQV

>gi568815580f:31992777_32229184|GENSCAN_predicted_CDS_6|213_bp
atggtgcgcataaatgtcctggctgatgctctcaagagcatcaacaatgccaaaaagaga
ggcaaacaccaggttcttattgggccatgctccaaagtcatcatccggtttctaactgtg
ataatgaagcatggttacattggcgagtctgaaatcattgatgatcagagctgggaagat
tgtgaacctcacaggcaggctaaacaagtgtag

>gi568815580f:31992777_32229184|GENSCAN_predicted_peptide_7|107_aa
MAGDGETRRWRQRQRPRDPAQRFPRASCPAAAIFAAEAPGQMEGGVRCAYRPLTGPEPRL
MVQGDSPAAASSSVLALRCLQPTRPSPNAGAPGIWAEEPGEAGRHGV

>gi568815580f:31992777_32229184|GENSCAN_predicted_CDS_7|324_bp
atggcgggggatggggaaacaaggcgatggcgacagcggcagcggccgagagacccggcc
cagcgctttcctcgagcttcctgtccggccgccgctatcttcgcagccgaggccccgggg
caaatggagggcggcgtgcgctgtgcttatcggcccctaacggggccggagccgaggctc
atggtgcagggagattcgcccgccgccgccagcagctctgtcttggcattgcgctgccta
cagcctacccggccgtcaccgaacgcgggagcgccggggatctgggcggaggagccagga
gaggcggggaggcacggggtgtga

>gi568815580f:31992777_32229184|GENSCAN_predicted_peptide_8|229_aa
MRESGAHCPLCRGNVTRRERACPERALDLENIMRKFSGSCRCCAKQIKFYRMRHHYKSCK
KYQDEYGVSSIIPNFQISQDSVGNSNRSETSTSDNTETYQENTRPLRDPLGEASWAPESG
GDLENLYVYLRDCKHTNQHPVSSSGIVNTPIGTLYLAQGLQTPISILRLAQEASKTTNPP
EGRNSEHIRTSERTNSRRATLRAVTLTARVRSFILEVSETKNPPIPDTA

>gi568815580f:31992777_32229184|GENSCAN_predicted_CDS_8|690_bp
atgagggaaagcggagcacattgtcccctatgtcgtggaaatgtgactagaagagagaga
gcatgtcctgaacgggccttagaccttgaaaatataatgaggaagttttctggtagctgc
agatgctgtgcaaaacagattaaattctatcgcatgagacatcattacaaatcttgtaag
aagtatcaggatgaatatggtgtttcttctatcattccaaactttcagatctctcaagat
tcagtagggaacagcaataggagtgaaacatccacatctgataacacagaaacttaccaa
gagaatacaaggcccctgcgggatccactgggtgaagccagctgggctcctgagtctggt
ggggacctggagaacctttatgtctatctcagggattgtaaacacaccaatcagcaccct
gtgtctagctcagggattgtaaatacaccaatcggcactctgtatctagctcaaggtttg
caaacaccaatcagcatcctgcgtctagctcaggaagccagcaagaccacgaacccacca
gaaggaagaaactccgaacacatccgaacatcagaaagaacaaactccagacgcgccacc
ttaagagctgtaacactcactgcgagggtccgcagcttcattcttgaagtcagtgagacc
aagaacccaccaattcctgacacagcatga

>gi568815580f:31992777_32229184|GENSCAN_predicted_peptide_9|151_aa
MVVRRSCFPYICTVGTLGSMIILSCSMTEDFCFDSCCMWWALIVDFAPCGQKGQNTKKYI
YSTEIFTSNNPELRSEDETVFRALEKWKTSEQTIGEMDFYICNDPHPDSALYQVCEKSLP
NSVSTIEKVKLRWSTSFPTFLGSLAGTLSLL

>gi568815580f:31992777_32229184|GENSCAN_predicted_CDS_9|456_bp
atggtggtgagaagaagctgcttcccctacatatgcactgtgggaaccctaggatctatg
ataatactcagctgttcaatgactgaggacttctgctttgacagctgctgcatgtggtgg
gccttgattgttgactttgctccatgtggccagaagggccagaataccaaaaagtatata
tacagcactgagattttcaccagcaacaatccagagctcagatctgaggatgagacagtt
ttcagggccttagagaaatggaaaacctctgagcagacaataggagaaatggatttctac
atctgtaatgaccctcaccccgattctgccctgtaccaagtatgtgaaaaatctctccca
aactcagtttctacaatagaaaaagtgaaactgaggtggtcaaccagcttccccactttc
ttgggttccctggcaggaaccctgtccttgctttaa

>gi568815580f:31992777_32229184|GENSCAN_predicted_peptide_10|394_aa
MGKYAEALRSQQKAVLMSVRVMGIEHPNTIQENMHLALHCFTSRQLSLALSLLQGAHYLM
RWCLGKTPRGGVLDNIRRVLHRVMEYDLSLCFLDNALAVSTKYQGPKALKVALGHHLITS
VYESKAEFPVGPAAPEGRAGCTPSLGEDQEKTKESSEYLKCLTQLAVALRRAMHEIYRNG
SSNNIPPLNFTAPSMASVLEQFKGINGILFIPLSQKDLESLKAEVLIKPAGTHLTEGKHP
ILSDSALPCGGTTQLQSTLAILPHLWGYQEKNARHTKKHKQFEETEQAMEQDSDMADMLE
LSDQKFKTTMINMLRALTNKVDSMQEDMGIISREMEILRKTQKEMLEIKNTVTEMKNPFD
RFISRLDTAERNPQLEDISIETSKTEKQREKKKD

>gi568815580f:31992777_32229184|GENSCAN_predicted_CDS_10|1185_bp
atgggcaagtacgcagaggccctgagaagccagcagaaggcagtgctgatgagcgtgcgg
gtgatgggcatcgagcaccccaacaccatccaggaaaacatgcacctggccctgcactgc
ttcaccagcaggcagctgtccctggccctcagcctgctgcagggcgcccactacctcatg
cgctggtgcttggggaagacaccccgaggtggcgtgctggacaacatcaggcgggtgctg
cacagggtgatggagtacgacctgtcgctgtgcttcctggacaacgcgctggccgtcagc
accaagtaccaagggcccaaagctctcaaggtggcccttggccaccacctcatcacctcg
gtctatgagagcaaagctgagtttccggtcggccctgcagcaccagaaggaagggctggc
tgcacaccctctctgggcgaggaccaggagaagaccaaggagagctctgagtacctcaag
tgcctgacccagctggccgtggccctgcggcgcgccatgcatgagatctaccgcaacggc
tccagcaacaacatcccgcccctcaacttcacagcccccagcatggccagcgtcttggag
cagttcaaaggcatcaatggcatcctcttcattcctctcagccaaaaagacttggagagt
ctgaaagccgaggttctgataaaacctgctggaactcacctgacggaaggaaaacatcca
attctatctgactctgcccttccgtgtggaggaactacccaactccagtccactctagcc
atcctgccccacctatggggctatcaagaaaaaaatgcaaggcatactaaaaagcacaaa
cagtttgaagagaccgagcaagcaatggaacaagactcagatatggcagatatgttggaa
ttatcagaccagaaatttaaaacaactatgattaatatgctaagggctctaacaaataaa
gtagacagcatgcaagaggacatggggattataagcagagagatggaaattctaagaaag
acccaaaaagaaatgctagaaataaaaaatactgtaacagaaatgaagaatccctttgac
agatttattagtagactggacacagctgaaaggaatccacaactggaggatatctcaata
gaaacctccaaaactgaaaagcagagagaaaaaaaaaaagactga

>gi568815580f:31992777_32229184|GENSCAN_predicted_peptide_11|616_aa
MYEMNAKGVILNAFERYRLKTCIDFKPWAGETNYISVFKGSGCWSSVGNRRVGKQELSIG
ANCDRIATVQHEFLHALGFWHEQSRSDRDDYVRIMWDRILSGREHNFNTYSDDISDSLNV
PYDYTSVMHYSKTAFQNGTEPTIVTRISDFEDVIGQRMDFSDSDLLKLNQLYNCSSSLSF
MDSCSFELENVCGMIQSSGDNADWQRVSQVPRGPESDHSNMGQCQGSGFFMHFDSSSVNV
GATAVLESRTLYPKRGFQCLQFYLYNSGSESDQLNIYIREYSADNVDGNLTLVEEIKEIP
TGSWQLYHVTLKVTKKFRVVFEGRKGSGASLGGLSIDDINLSETRCPHHIWHIRNFTQFI
GSPNGTLYSPPFYSSKGYAFQIYLNLAHVTNAGIYFHLISGANDDQLQWPCPWQQATMTL
LDQNPDIRQRMSNQRSITTDPFMTTDNGNYFWDRPSKVGTVALFSNGTQFRRGGGYGTSA
FITHERLKSRDFIKGDDVYILLTVEDISHLNSTQIQLTPAPSVQDLCSKTTCKNDGVCTV
RDGKAECRCQSGEDWWYMGERCEKRGSTRDTIVIAVSSTVAVFALMLIITLVSVYCTRKK
YRERMSSNRPNLTPQN

>gi568815580f:31992777_32229184|GENSCAN_predicted_CDS_11|1848_bp
atgtatgaaatgaatgctaagggagttatcctcaatgcatttgaacgttatcgccttaaa
acatgtattgactttaagccttgggctggagaaacaaactatatatcagtgttcaagggc
agtggctgctggtcttcagtaggaaataggcgggttgggaagcaagaactttccatcggg
gcaaactgtgaccgaatagcaacagttcaacacgagttcctccacgctctgggattctgg
catgagcagtcgcgttctgaccgggatgactatgtcaggataatgtgggacagaattctg
tcaggcagagagcacaattttaacacctatagtgacgatatatcagattccctgaatgtt
ccctatgattacacttcagtaatgcactacagtaaaactgcattccaaaatggaacagag
ccgacaattgtcacaagaatctcagactttgaggatgtgatcggccaacgaatggatttc
agtgactctgatctcctaaagttgaatcaactgtataactgctcctcttccttgagtttt
atggactcgtgcagttttgaactggaaaatgtgtgtggcatgatccaaagttcaggagat
aatgctgactggcaacgggtttcacaggttcccagggggccagagagtgatcactccaac
atgggccagtgccaaggttctggtttcttcatgcatttcgatagcagctctgtaaatgtg
ggggccacagcagtgctggaaagtagaacgctgtaccctaaaagaggatttcagtgcctg
caattttacttatataacagtggcagtgaaagtgatcaactgaacatctatatcagggag
tattctgcagacaatgtggatggcaatttaacccttgtggaagaaataaaagaaataccc
actgggagctggcaactttatcatgtaacattgaaagtgaccaagaagtttagagtggtg
tttgaaggacgcaaaggctctggtgcatcactgggtggtctgtctattgatgacatcaat
ctttcggaaacacggtgccctcatcatatctggcatataaggaatttcacacagttcatt
ggcagcccaaatggaactctgtatagccctccattttactcttctaaaggttatgccttt
cagatttacttaaatctagcccatgtgactaatgcagggatatatttccacttgatctct
ggagccaatgatgatcaattacagtggccatgtccttggcaacaagccacaatgacactt
ttggatcaaaatcctgacattcgacagcgtatgtccaatcagcggagtataactacagac
ccatttatgaccaccgataatggaaactatttctgggacaggccttctaaagtgggaaca
gtggctttgttctctaatggaactcagtttagaagaggtgggggctatggaaccagtgcc
tttataacccacgaaaggctgaaaagcagagattttataaaaggagatgatgtttatatc
ctactgacagtggaagacatatctcacctcaactctacacaaatccagctaacaccagcc
cctagtgttcaagacctctgctcaaaaaccacctgtaaaaatgacggtgtctgcactgtt
cgagatggcaaagctgagtgcaggtgccagtcaggggaagactggtggtacatgggagaa
aggtgtgaaaagagaggctccacccgagacaccatagtcattgctgtttcatctactgtt
gctgtgtttgccttgatgctgatcatcacccttgtcagtgtctattgcaccaggaagaaa
tatcgtgaaaggatgagctcaaatcgaccaaatttgactccgcaaaat