GENSCAN 1.0	Date run:  3-Nov-116	Time: 17:48:39

Sequence gi568815578r:860360_1102164 : 241805 bp : 47.27% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    867    862    6                               1.05
 1.03 Term -   4933   4749  185  2  2   58   45   128 0.441   3.21
 1.02 Intr -   8479   8272  208  1  1   61   94   130 0.603   9.55
 1.01 Init -   9118   8936  183  1  0   85   92    10 0.771   0.28
 1.00 Prom -  10244  10205   40                              -6.76

 2.12 PlyA -  10482  10477    6                               1.05
 2.11 Term -  12761  12601  161  0  2   89   43   290 0.998  22.70
 2.10 Intr -  14055  13925  131  2  2   78   92   152 0.998  14.94
 2.09 Intr -  15130  14984  147  0  0   51    9   142 0.436   1.95
 2.08 Intr -  17968  17802  167  1  2  122   94   150 0.987  17.76
 2.07 Intr -  19489  19388  102  1  0   98   68    79 0.934   7.27
 2.06 Intr -  20927  20812  116  0  2  121   72   120 0.970  13.87
 2.05 Intr -  24966  24719  248  2  2  114  100   466 0.991  47.50
 2.04 Intr -  28080  27959  122  0  2   48   94   164 0.975  12.29
 2.03 Intr -  30009  29854  156  0  0  106   92   240 0.745  26.41
 2.02 Intr -  52631  52539   93  2  0  111   80    43 0.830   5.96
 2.01 Init -  55837  55547  291  1  0   75  102   157 0.524  11.19
 2.00 Prom -  56010  55971   40                              -2.46

 3.24 PlyA -  59901  59896    6                               1.05
 3.23 Term -  60323  60193  131  0  2   78   38    29 0.194  -4.76
 3.22 Intr -  60583  60481  103  1  1  103  116    -9 0.248   3.15
 3.21 Intr -  80167  79867  301  0  1   80  119    93 0.032   8.34
 3.20 Intr -  96300  96159  142  1  1  112   30    81 0.138   4.11
 3.19 Intr -  96650  96523  128  1  2   50   72    26 0.229  -2.48
 3.18 Intr -  99423  99173  251  0  2   69   99    51 0.383   0.54
 3.17 Intr - 100107 100031   77  1  2   93   58    67 0.464   3.43
 3.16 Intr - 102759 102676   84  1  0   33   91    67 0.478   1.29
 3.15 Intr - 103761 103576  186  1  0  112   83    35 0.780   5.06
 3.14 Intr - 106955 106815  141  0  0   85   96   122 0.883  13.02
 3.13 Intr - 107779 107591  189  2  0   83   68   371 0.995  34.16
 3.12 Intr - 120016 119951   66  2  0  101   82    34 0.014   2.98
 3.11 Intr - 126088 125921  168  2  0  122   55    36 0.006   3.62
 3.10 Intr - 141984 141727  258  1  0   65   82   288 0.992  23.33
 3.09 Intr - 147670 147577   94  1  1   41  103    50 0.030   1.34
 3.08 Intr - 160403 160349   55  1  1   86   95    49 0.280   4.38
 3.07 Intr - 166024 165934   91  2  1   72   84    46 0.075   1.65
 3.06 Intr - 181661 181554  108  0  0   58  101    27 0.064   1.26
 3.05 Intr - 192587 192394  194  1  2   82   72   123 0.295   9.24
 3.04 Intr - 196105 196045   61  2  1   64  116    38 0.628   1.99
 3.03 Intr - 198108 198003  106  0  1   81   98     5 0.446   0.59
 3.02 Intr - 198969 198871   99  0  0  156   72    11 0.765   6.61
 3.01 Init - 207654 207604   51  0  0   85  110    15 0.248   4.56
 3.00 Prom - 212562 212523   40                              -2.26

 4.00 Prom + 216678 216717   40                              -1.86
 4.01 Init + 232163 232201   39  1  0  111   97    20 0.366   5.39
 4.02 Intr + 234806 234931  126  1  0  112  121   -55 0.115   1.08

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 125368 125419   52  1  1  103   42    56 0.821  -0.60


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578r:860360_1102164|GENSCAN_predicted_peptide_1|191_aa
MAADKTNLRILGSTRHCRGHGWCGLEPRLGLLGATAHRCQPLGYLHLRVPMENTCHLSLH
QSTLGIWASTTKLVYQGQEELPGKASKTTQSLPLALDGSIISEISALFPAKAVSTLGREF
PEYTPETTTTGAQMRMCVLRFNTGTYSATTDVSSGPSQQPGITHVPTEDVFGIAFCCFSA
AFLLLRPHELA

>gi568815578r:860360_1102164|GENSCAN_predicted_CDS_1|576_bp
atggctgcagacaagaccaacctgaggatcctgggcagcacaaggcactgtagagggcac
ggctggtgtggtctcgagcctagactgggtctcctgggggccacagctcataggtgccag
cctctaggatacctgcatctgcgggttcctatggaaaacacttgtcacctctccctgcac
cagagcactctgggcatctgggcatctaccaccaaactcgtgtaccaagggcaggaggaa
cttcctggaaaggcctccaagaccactcagtctctcccactggcacttgatggatccatc
atttctgagatctctgcgttgttcccagcaaaggcagtttccacactggggagagagttc
cctgagtacaccccagagacaaccaccacaggtgcccagatgcgcatgtgtgtgctgagg
ttcaacactggaacttattcagctacaacagatgtgtcctctgggccctcgcagcaacct
ggtataacacacgtgcctacagaggatgtgtttggcatcgcattctgctgcttttctgct
gcttttctgcttcttcgaccacatgaattggcttag

>gi568815578r:860360_1102164|GENSCAN_predicted_peptide_2|577_aa
MLQGSLLLVVATMSVAQQTRQEADRGCETLVVQHGHCSYTFLLPKSEPCPPGPEVSRDSN
TLQRESLANPLHLGKLPTQQVKQLEQALQNNTQWLKKCTGEETGQRGKVTCQSHVAVKAN
LDSHYKLQLERAIKTILRSKLEQVQQQMAQNQTAPMLELGTSLLNQTTAQIRKLTDMEAQ
LLNQTSRMDAQMPETFLSTNKLENQLLLQRQKLQQLQGQNSALEKRLQALETKQQEELAS
ILSKKAKLLNTLSRQSAALTNIERGLRGVRHNSSLLQDQQHSLRQLLVLLRHLVQERANA
SAPAFIMAGEQVFQDCAEIQRSGASASGVYTIQVSNATKPRKVFCDLQSSGGRWTLIQRR
ENGTVNFQRNWKDYKQGFGDPAGEHWLGNEVVHQLTRRAAYSLRVELQDWEGHEAYAQYE
HFHLGSENQLYRSHGLHHQAGLDMPTKATEPGKEIEILTWLAADVEAAELGCPGAQIHGG
WLSVVGYSGSAGRQSSLVLQNTSFSTLDSDNDHCLCKCAQVMSGGWWFDACGLSNLNGVY
YHAPDNKYKMDGIRWHYFKGPSYSLRASRMMIRPLDI

>gi568815578r:860360_1102164|GENSCAN_predicted_CDS_2|1734_bp
atgctgcagggcagcctcctccttgtggttgccaccatgtctgtggctcaacagacaagg
caggaggcggataggggctgcgagacacttgtagtccagcacggccactgtagctacacc
ttcttgctgcccaagtctgagccctgccctccggggcctgaggtctccagggactccaac
accctccagagagaatcactggccaacccactgcacctggggaagttgcccacccagcag
gtgaaacagctggagcaggcactgcagaacaacacgcagtggctgaagaagtgtacaggt
gaggaaacaggccagagagggaaagtgacttgccagagccatgtagcagtgaaagccaat
ctggattctcactacaaactgcagctagagagggccatcaagacgatcttgaggtcgaag
ctggagcaggtccagcagcaaatggcccagaatcagacggcccccatgctagagctgggc
accagcctcctgaaccagaccactgcccagatccgcaagctgaccgacatggaggctcag
ctcctgaaccagacatcaagaatggatgcccagatgccagagacctttctgtccaccaac
aagctggagaaccagctgctgctacagaggcagaagctccagcagcttcagggccaaaac
agcgcgctcgagaagcggttgcaggccctggagaccaagcagcaggaggagctggccagc
atcctcagcaagaaggcgaagctgctgaacacgctgagccgccagagcgccgccctcacc
aacatcgagcgcggcctgcgcggtgtcaggcacaactccagcctcctgcaggaccagcag
cacagcctgcgccagctgctggtgttgttgcggcacctggtgcaagaaagggctaacgcc
tcggccccggccttcataatggcaggtgagcaggtgttccaggactgtgcagagatccag
cgctctggggccagtgccagtggtgtctacaccatccaggtgtccaatgcaacgaagccc
aggaaggtgttctgtgacctgcagagcagtggaggcaggtggaccctcatccagcgccgt
gagaatggcaccgtgaattttcagcggaactggaaggattacaaacagggcttcggagac
ccagctggggagcactggctgggcaatgaagtggtgcaccagctcaccagaagggcagcc
tactctctgcgtgtggagctgcaagactgggaaggccacgaggcctatgcccagtacgaa
catttccacctgggcagtgagaaccagctatacagatctcatggtcttcatcaccaggca
ggcttggacatgcccaccaaggccacagagcctggcaaagaaatagaaatcctcacctgg
ctggcagcagatgtcgaagctgcagagctggggtgccctggagcccagatccatgggggc
tggctttctgtggtcgggtacagcggctcagcagggcgccagagcagcctggtcctgcag
aacaccagctttagcacccttgactcagacaacgaccactgtctctgcaagtgtgcccaa
gtgatgtctggagggtggtggtttgacgcctgtggcctgtcaaacctcaacggcgtctac
taccacgctcccgacaacaagtacaagatggacggcatccgctggcactacttcaagggc
cccagctactcactgcgtgcctctcgcatgatgatacggcctttggacatctaa

>gi568815578r:860360_1102164|GENSCAN_predicted_peptide_3|1027_aa
MRKNQQREQCQMLLSNQILIPNKHLAPKLCLRVCLHRTQPATQILIPGGQHSQSLWEVSP
SSPSEEQPPVLSPGGVDPFPSLSYKVGSDDSTHMQARSQDSVKEKRSSRKVLGHLSLPCM
GHGLLPTLLMLTALALGLGSGDRTQQCCQSLMPMLKTMRGGKTKVKLGEKERSPHSSSAA
TFFTLTLITHNTWVWFFARDESPPLEWTWMELEAVILSKLMQEQKTKYHKFSLISGSKRE
LLMAPSEGGEAEPAKIGNQARLRTRMSMLITLTRHMAGSSSKFDKAGQCPGSANALTRPG
GRTDPRLADAPGAPTAAPAPAVPPPGRGALGPSGRLGSASPDPAAQMRAPLCLLLLVAHA
VDMLALNRRKKQGRYVMLSHSLLSSLWVDFSPVCWGAEEGMGIETAVTTLMLLWPPQFPV
LENSGAITSEVKRTPKKASAQHWELSKASVVGTGLGGNCTGCIICSEENGCSTCQQRLFL
FIRREGIRQYGKCLHDCPPGYFGIRGQEVNRCKKCGATCESCFSQDFCIRCKRQFYLYKG
KCLPTCPPGTLAHQNTRECQGECELGPWGGWSPCTHNGKTCGSAWGLESRVREAGRAGHE
EAATCQVLSESRKCPIQRPCPGDHYTYFQNVSGGYEGPLIYIEERPQGVLERSPGQKKGR
KDRRPRKDRKLDRRLDSPEAISTAFSHQPPRGAGWTRLQGFQRPGLDTSPSWPWRVTTWP
LGGQPALEGILCKLPATLIGTPPQASLSWVPCPFFPSRISLSHILWRIEGPLWEGDSAVR
WASPTPFLQAKLGEVHREAQKQALHVIPTCCHRMTAVNQEQVAARLVKERISETGSCCGS
LLAGLEQGGGLDVMVIMGCSLAVKAGGLKDNLVPTPQCGCRWLFRPPHLPPSAFAGAHME
CPPGLTVLQTFTGAPQAVHVGNVRKPKRHHAPNTKEVFSLLTKSPTWVPLEQEVLFFQEN
RFQHVTLGKWPPSLSISFLMSEMQGFLERHCTPPLVPSDPVRLTCSKAPGLDTGSSLTIH
SSSFLWL

>gi568815578r:860360_1102164|GENSCAN_predicted_CDS_3|3084_bp
atgaggaagaaccagcaaagagaacagtgtcaaatgcttctgagcaatcagatattgatt
cctaataaacaccttgcacctaaactctgtcttcgtgtctgcctgcatagaacccaacct
gcaacacaaattctgattcctggaggtcagcattcacaatccctttgggaagtatctccc
tcatctccctcggaggaacagcccccagttctcagtccaggtggggttgaccccttccca
tccctgagctacaaagttggaagtgatgattccacacatatgcaggctagatctcaagac
agtgtcaaggaaaaaaggagcagccgcaaggtgctgggccacctgagtctgccatgcatg
ggccacgggctcctaccgaccctcctgatgctcacagccctggcactggggttgggcagt
ggggacaggacacaacagtgctgccaatccctgatgcccatgctcaagaccatgagagga
ggaaagaccaaggtgaaactgggggaaaaggagaggtctccccactcctcttccgcggca
acattcttcaccttaactcttatcactcacaacacgtgggtttggttttttgcccgtgat
gagtctcctccactggaatggacatggatggagctggaggccgttatccttagcaaacta
atgcaggaacagaaaaccaaataccacaagttctcactcataagtgggagcaaaagggag
ctgctgatggcaccttcagagggtggtgaagctgaaccggctaagattgggaaccaggca
agattgagaacaaggatgtctatgctcatcacacttactcggcatatggctggaagttct
agcaagtttgataaagcagggcagtgccccggctccgccaacgccctcactagacctggc
ggccggaccgacccgcgcctggcggatgcgcccggcgcgcccacagcagcccccgcgccc
gccgtgccgccgccgggacgtggggcccttgggccgtcgggccgcctggggagcgccagc
ccggatccggctgcccagatgcgggcgccactctgcctgctcctgctcgtcgcccacgcc
gtggacatgctcgccctgaaccgaaggaagaagcaagggagatatgtcatgctgtctcat
tctcttctctcctccctctgggttgatttctcccctgtatgttggggagcagaagaagga
atggggatagagacagctgtcactaccctgatgctgctgtggcctccacaattcccggtg
ttagaaaactctggggccatcaccagtgaggtcaagcggacaccgaagaaggcctcagca
cagcactgggaacttagcaaggcgtcagtagtgggcactggcctggggggcaactgcaca
ggctgtatcatctgctcagaggagaacggctgttccacctgccagcagaggctcttcctg
ttcatccgccgggaaggcatccgccagtacggcaagtgcctgcacgactgtccccctggg
tacttcggcatccgcggccaggaggtcaacaggtgcaaaaaatgtggggccacttgtgag
agctgcttcagccaggacttctgcatccggtgcaagaggcagttttacttgtacaagggg
aagtgtctgcccacctgcccgccgggcactttggcccaccagaacacacgggagtgccag
ggggagtgtgaactgggtccctggggcggctggagcccctgcacacacaatggaaagacc
tgcggctcggcttggggcctggagagccgggtacgagaggctggccgggctgggcatgag
gaggcagccacctgccaggtgctttctgagtcaaggaaatgtcccatccagaggccctgc
ccaggagaccactacacgtatttccaaaatgtttctgggggctatgaaggaccactgatt
tacatagaagagaggccacagggtgtgcttgagaggagccccggccagaagaagggcagg
aaggaccggcgcccacgcaaggacaggaagctggaccgcaggctggactccccagaggcc
atttccacagccttcagccaccagccaccccgaggagctggctggacaaggctccagggc
ttccagaggcctggcttggacacctcccccagctggccgtggagggtcacaacctggcct
ctgggtgggcagccagccctggagggcatcctctgcaagctgcctgccaccctcatcggc
actcccccacaggcctccctctcatgggttccatgcccctttttcccaagccggatcagc
ctctcccacattctctggaggattgaggggcctctctgggaaggagactctgctgtcagg
tgggcatcgcccactcccttcttacaagccaagcttggagaagttcacagagaagctcag
aaacaggccctgcatgtcattcccacatgctgccaccggatgacggcagtcaaccaggaa
caggtcgcagccaggcttgtcaaggagcgcatttctgaaacggggtcgtgttgcggttct
ctcctagcaggactggagcagggtggagggcttgatgtgatggtgatcatgggctgctct
ctggcagtcaaggcgggaggactgaaggacaatctggttccaacaccacagtgtggctgc
cgttggctcttcaggcctcctcacctcccaccctctgcctttgctggtgcccacatggaa
tgtcctcccgggctgaccgtcctgcagacttttacaggtgccccccaagcggtgcatgtg
ggtaacgttcgtaagcccaagaggcaccatgcaccaaataccaaagaggttttttcctta
ctcaccaaaagcccaacatgggtgcccctggagcaggaagttctgttcttccaggaaaat
agattccagcatgtaacactgggcaagtggcctccctctctgagtatcagtttcctcatg
agtgaaatgcaaggttttcttgagcgtcactgtaccccacccttagtcccttccgatcct
gtgaggttgacctgctccaaggctccaggcctggacacaggatccagcctgaccatccac
agtagctccttcctctggctataa

>gi568815578r:860360_1102164|GENSCAN_predicted_peptide_4|55_aa
MAVTVLGIVFMFKKLQMRGRSLEIVHLMCPSPHFTDGDAEAQGGAVTCYITNLVK

>gi568815578r:860360_1102164|GENSCAN_predicted_CDS_4|165_bp
atggctgtcactgttcttggcatagtgttcatgttcaagaaacttcaaatgagggggagg
agtttagaaattgtccatcttatgtgcccttctccccattttacagatggggacgctgag
gcccagggaggagcagtgacctgctatatcacaaaccttgttaag