GENSCAN 1.0	Date run:  8-Nov-116	Time: 04:11:06

Sequence gi568815578f:44645911_44850835 : 204925 bp : 48.11% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5696   5741   46  1  1   84   72   104 0.186   7.26
 1.02 Intr +   9343   9536  194  2  2    6   82    73 0.057  -2.29
 1.03 Intr +   9821   9884   64  1  1  126   72    55 0.230   5.99
 1.04 Intr +  17599  17646   48  2  0   52   99    53 0.119   1.45
 1.05 Intr +  26110  26244  135  2  0  100   80    24 0.455   3.34
 1.06 Intr +  29891  30004  114  0  0   76   30   108 0.581   4.22
 1.07 Intr +  34117  34170   54  2  0   82   93    32 0.262   2.05
 1.08 Term +  44019  44188  170  1  2   91   47    94 0.348   3.64
 1.09 PlyA +  45452  45457    6                               1.05

 2.00 Prom +  48092  48131   40                              -3.16
 2.01 Init +  69481  69540   60  0  0   76  116    78 0.956   8.66
 2.02 Intr +  73987  74203  217  0  1   91   58   202 0.940  15.58
 2.03 Intr +  78828  79082  255  1  0   82  105   296 0.621  28.12
 2.04 Term +  81177  81397  221  1  2  151   43    87 0.960   7.70
 2.05 PlyA +  83063  83068    6                               1.05

 3.00 Prom +  94009  94048   40                              -2.36
 3.01 Init + 100001 100283  283  1  1  102   97   682 0.999  65.70
 3.02 Term + 104219 104928  710  0  2   80   48  1122 0.583 101.07
 3.03 PlyA + 106380 106385    6                               1.05

 4.12 PlyA - 109208 109203    6                              -0.45
 4.11 Term - 110442 110224  219  0  0  127   39   340 0.987  30.04
 4.10 Intr - 111127 110988  140  2  2   67   94   254 0.943  24.08
 4.09 Intr - 111861 111760  102  1  0  101   41   117 0.886   8.45
 4.08 Intr - 112274 112162  113  1  2   99   92   113 0.860  12.82
 4.07 Intr - 125506 125365  142  2  1   40  108   185 0.863  15.11
 4.06 Intr - 147743 147560  184  2  1   99   44   107 0.041   6.76
 4.05 Intr - 151984 151956   29  2  2   69   76    13 0.000  -3.97
 4.04 Intr - 164721 164265  457  0  1   84  115   448 0.617  39.89
 4.03 Intr - 165814 165727   88  0  1   73   42    45 0.314  -1.63
 4.02 Intr - 192228 192013  216  2  0   37   90    82 0.089   0.92
 4.01 Init - 196581 196259  323  0  2   51   42   254 0.224  13.91

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr + 152943 153088  146  1  2  142   83    44 0.981   9.30


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:44645911_44850835|GENSCAN_predicted_peptide_1|274_aa
MVPSCAPALLPPPPLASRRDHHAKRVHIWPFQLTVPLSPGFHHPYEDSNHVSEAVLGHPA
QLPTENQALVNAMWDRRITQVHSPPFCTLLCSSVSGSHAAVDQSSRMEDGKQAIKSSDER
ERVFSLAQSHADNRRLHEPDLQEGSRAVPREDPQWNYQADSPGKMERTNGLFKTHLTKLS
LQLKKEDSVKDTAQKLNNQAKTLYLSAVSPAADPPLAPGPPGGWSGLSSKKLELDVGFLR
AEEGLARDLQKEKCIPPRVKSEGALQQWPSVGHL

>gi568815578f:44645911_44850835|GENSCAN_predicted_CDS_1|825_bp
atggtgccctcgtgcgccccggcgctgctccctccgccgccgctcgcttctagaagagac
catcatgctaagagagtccacatatggccattccagttgacagtcccactgagcccaggc
ttccaccatccctacgaagacagcaatcatgttagcgaagctgtgttgggccatccagcc
cagctgcccactgaaaaccaggctttggtcaatgccatgtgggacagaagaattacccaa
gtgcactctccacccttctgcacgctgctctgctcctctgtgtccggcagccatgctgct
gtggatcagtcttccaggatggaggatgggaagcaggccatcaagagttctgatgaacgg
gaaagagttttttctctagcccaatctcacgctgataaccgccggcttcatgaacctgac
ctccaggaaggcagtagagcagttccccgagaggacccccaatggaactatcaggcagat
tccccaggaaagatggaacggactaatggtcttttcaagacacacctcaccaagctcagc
ctccaacttaaaaaggaggactctgtcaaggatacagcccaaaaactcaacaaccaagca
aaaaccctgtacctatcagcagtcagtcctgcagccgacccccctctggccccagggcct
cctggagggtggagtggtcttagcagcaagaagctggagttggatgttggattcctgagg
gccgaggaaggacttgcaagggacctccagaaggagaagtgcatcccccccagggtcaag
agtgagggagccctgcagcaatggccatctgtgggacatctgtga

>gi568815578f:44645911_44850835|GENSCAN_predicted_peptide_2|250_aa
MRGTPKTHLLAFSLLCLLSKVRTQLCPTPCTCPWPPPRCPLGVPLVLDGCGCCRVCARRL
GEPCDQLHVCDASQGLVCQPGAGPGGRGALCLLAEDDSSCEVNGRLYREGETFQPHCSIR
CRCEDGGFTCVPLCSEDVRLPSWDCPHPRRVEVLGKCCPEWVCGQGGGLGTQPLPAQGPQ
FSGLVSSLPPGVPCPEWSTAWGPCSTTCGLGMATRVSNQNRFCRLETQRRLCLSRPCPPS
RGRSPQNSAF

>gi568815578f:44645911_44850835|GENSCAN_predicted_CDS_2|753_bp
atgagaggcacaccgaagacccacctcctggccttctccctcctctgcctcctctcaaag
gtgcgtacccagctgtgcccgacaccatgtacctgcccctggccacctccccgatgcccg
ctgggagtacccctggtgctggatggctgtggctgctgccgggtatgtgcacggcggctg
ggggagccctgcgaccaactccacgtctgcgacgccagccagggcctggtctgccagccc
ggggcaggacccggtggccggggggccctgtgcctcttggcagaggacgacagcagctgt
gaggtgaacggccgcctgtatcgggaaggggagaccttccagccccactgcagcatccgc
tgccgctgcgaggacggcggcttcacctgcgtgccgctgtgcagcgaggatgtgcggctg
cccagctgggactgcccccaccccaggagggtcgaggtcctgggcaagtgctgccctgag
tgggtgtgcggccaaggagggggactggggacccagccccttccagcccaaggaccccag
ttttctggccttgtctcttccctgccccctggtgtcccctgcccagaatggagcacggcc
tggggaccctgctcgaccacctgtgggctgggcatggccacccgggtgtccaaccagaac
cgcttctgccgactggagacccagcgccgcctgtgcctgtccaggccctgcccaccctcc
aggggtcgcagtccacaaaacagtgccttctag

>gi568815578f:44645911_44850835|GENSCAN_predicted_peptide_3|330_aa
MRRPSVRAAGLVLCTLCYLLVGAAVFDALESEAESGRQRLLVQKRGALRRKFGFSAEDYR
ELERLALQAEPHRAGRQWKFPGSFYFAITVITTIEYGHAAPGTDSGKVFCMFYALLGIPL
TLVTFQSLGERLNAVVRRLLLAAKCCLGLRWTCVSTENLVVAGLLACAATLALGAVAFSH
FEGWTFFHAYYYCFITLTTIGFGDFVALQSGEALQRKLPYVAFSFLYILLGLTVIGAFLN
LVVLRFLVASADWPERAARTPSPRPPGAPESRGLWLPRRPARSVGSASVFCHVHKLERCA
RDNLGFSPPSSPGVVRGGQAPRLGARWKSI

>gi568815578f:44645911_44850835|GENSCAN_predicted_CDS_3|993_bp
atgcggaggccgagcgtgcgcgcggccgggctggtcctgtgcaccctgtgttacctgctg
gtgggcgctgctgtcttcgacgcgctcgagtccgaggcggaaagcggccgccagcgactg
ctggtccagaagcggggcgctctccggaggaagttcggcttctcggccgaggactaccgc
gagctggagcgcctggcgctccaggctgagccccaccgcgccggccgccagtggaagttc
cccggctccttctacttcgccatcaccgtcatcactaccatcgagtacggccacgccgcg
ccgggtacggactccggcaaggtcttctgcatgttctacgcgctcctgggcatcccgctg
acgctggtcactttccagagcctgggcgaacggctgaacgcggtggtgcggcgcctcctg
ttggcggccaagtgctgcctgggcctgcggtggacgtgcgtgtccacggagaacctggtg
gtggccgggctgctggcgtgtgccgccaccctggccctcggggccgtcgccttctcgcac
ttcgagggctggaccttcttccacgcctactactactgcttcatcaccctcaccaccatc
ggcttcggcgacttcgtggcactgcagagcggcgaggcgctgcagaggaagctcccctac
gtggccttcagcttcctctacatcctcctggggctcacggtcattggcgccttcctcaac
ctggtggtcctgcgcttcctcgttgccagcgccgactggcccgagcgcgctgcccgcacc
cccagcccgcgccccccgggggcgcccgagagccgtggcctctggctgccccgccgcccg
gcccgctccgtgggctccgcctctgtcttctgccacgtgcacaagctggagaggtgcgcc
cgcgacaacctgggcttttcgcccccctcgagcccgggggtcgtgcgtggcgggcaggct
cccaggcttggggcccggtggaagtccatctga

>gi568815578f:44645911_44850835|GENSCAN_predicted_peptide_4|670_aa
MFSTFHNDTVIEVDHRNGNKTKRPCVIVEYNENMGTVDSVDQMLSSYPTEHKRHKVWYKK
LFRHLLNMAVRNSYILLEKDNPEDTISHVNFRLTLIGRMLEKHPKPGCQSTGGCVCVLSE
KFKYSSGSSTAFAECAASASLAAPVQSREAFPGRLGLNKGPEARDVGRPGSSKQDFFPGR
WLHKEVCEQLRRLFDIWGLIRWAGTLTSQRRPLPRRHGLAAAPLQARLALPAGGAADQSA
LRRHRRRHRRRRRRRQQHSAPRAPRAASSWPARRPRRARQPRSGASARPRAAATTPRAVL
RVKNGAAKLPKPPAAAAAAAAEAPGAGAGMERSQSRLSLSASFEALAIYFPCMNSFDDED
ADEQVHSYKQEACSRRGDPEIPCPNGPESAFRVCLNPFPGFILLRMDASISSILRVALKV
LFVEATAGTDVQKGDSRRLKGAIQRSTETGLAVEMPSRTLRQASHESIEDSMNSYGSEGN
LNYGGVCLASDAQFSDFLGSMGPAQFVGRQTLATTPMGDVEIGLQERNGQLEVDIIQARG
LTAKPGSKTLPAAYIKAYLLENGICIAKKKTKVARKSLDPLYNQVLLFPESPQGKVLQVI
VWGNYGRMERKQFMGVARVLLEELDLTTLAVGWYKLFPTSSMVDPATGPLLRQASQLSLE
STVGPCGERS

>gi568815578f:44645911_44850835|GENSCAN_predicted_CDS_4|2013_bp
atgttttcaacattccacaacgatactgttattgaggtagaccacagaaatggaaataaa
actaagaggccatgtgtcattgtggaatataacgagaatatgggaacagtggactcagtt
gatcagatgctctcttcttatccaactgagcacaaaaggcacaaggtttggtataagaaa
ctctttcgccaccttctaaacatggcagtgcggaactcctacatcctgctagagaaggac
aatcctgaggacacgattagccatgtaaatttcagactgacactgattggaagaatgctg
gaaaagcaccccaagccagggtgccagagcacagggggctgtgtctgtgtgctctcagag
aagttcaaatatagctcaggctcctccactgcttttgctgagtgtgcagcatctgcaagt
ctggcagccccggtgcagagcagggaagcttttcctggaaggctaggtctgaacaagggg
ccagaagccagggatgtcggcaggcctggctcaagtaaacaagatttctttcctgggaga
tggcttcataaagaggtgtgcgagcagctgagaaggttgtttgacatctggggcctgatt
aggtgggcagggaccctcacgtcccagcggcgccccctcccccggcggcacggattggct
gcggcgccgctccaagcccgcctcgcgctgccggcggggggcgccgcggaccagagcgcg
ctgcgccgccaccgccgccgccaccgccgccgccgccgccgccgccagcagcacagcgcg
cctcgggctccgcgcgccgccagctcctggcccgcccgccggccccgccgcgcccgccag
ccccgcagcggagcctcggcccggccccgggccgccgccaccacgccgcgcgccgtactc
cgcgtcaagaatggggcggccaagctgcccaagccgcccgccgccgccgccgccgccgcg
gccgaggcgcccggcgccggcgcgggcatggagcgctcgcagagccgcctcagtctgtcc
gcctccttcgaggcgctcgccatctacttcccgtgcatgaactccttcgacgacgaggac
gcagatgaacaggttcacagctataagcaggaggcctgttctagacgtggggaccctgaa
attccctgcccaaatggccctgagtcagctttcagggtctgtctcaaccccttccctggc
ttcattctcctgaggatggatgcatccatcagcagtatcctgagggtggccctgaaggtg
ctgtttgtggaggcgacagccggcacagatgtgcagaaaggggacagccggaggctgaag
ggggccatccagaggagcacggagacgggcctggcagtggagatgcccagccggacactg
cgccaggccagccacgagtccattgaggacagcatgaacagctatggctcagagggcaac
cttaactatggaggagtttgcctggcgtcggacgcccagttcagtgacttcctgggaagc
atggggccggcacagtttgtgggccgccagaccctggccaccacacccatgggggatgtg
gagatcggtctgcaggagcggaacggtcagttggaggtggacattatccaggctcgggga
ctgacagccaagccaggctccaagacactgccagcggcctacatcaaggcctacctgcta
gagaatggcatctgcattgccaagaagaagaccaaagtcgctcgcaagtcgctggaccca
ctgtataaccaggtgctgctgtttcctgagagtccccagggcaaagtcctccaggtgatc
gtgtgggggaactacgggcggatggagcggaagcagttcatgggtgtggctcgcgtgctg
ctggaggagctggacttgaccaccctggccgtgggctggtacaagctcttccccacctcc
tccatggtggacccagccacaggccccctgctccggcaggcatcccagttgtccctcgag
agcaccgtggggccctgcggagaacgatcttag