GENSCAN 1.0	Date run:  5-Nov-116	Time: 11:57:02

Sequence gi568815578f:3923917_4124439 : 200523 bp : 43.97% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -   3416   3411    6                               1.05
 1.05 Term -  10179  10055  125  1  2   45   48    68 0.310  -2.95
 1.04 Intr -  10434  10206  229  0  1  135   72    98 0.362  10.34
 1.03 Intr -  21302  21261   42  2  0   98  107    17 0.544   3.04
 1.02 Intr -  59215  59169   47  2  2   55   77    62 0.012  -0.07
 1.01 Init -  91704  91521  184  0  1   24   91   189 0.973  10.08
 1.00 Prom -  99598  99559   40                              -4.76

 2.00 Prom +  99778  99817   40                             -12.78
 2.01 Sngl + 100001 100528  528  1  0   90   48   818 0.962  74.06
 2.02 PlyA + 100778 100783    6                               1.05

 3.04 PlyA - 102647 102642    6                               1.05
 3.03 Term - 122232 122165   68  1  2   46   41   109 0.200   0.10
 3.02 Intr - 133636 133470  167  0  2   -4   92   122 0.025   3.00
 3.01 Init - 136045 135714  332  1  2   64    4   194 0.060   5.39
 3.00 Prom - 150318 150279   40                              -3.76

 4.05 PlyA - 152790 152785    6                               1.05
 4.04 Term - 160001 159885  117  2  0   57   37   119 0.450   2.24
 4.03 Intr - 168205 168048  158  2  2   72   64    62 0.047   1.93
 4.02 Intr - 185224 185047  178  1  1   48   80    50 0.207  -0.31
 4.01 Init - 186939 186745  195  0  0   85   61   118 0.741   7.93
 4.00 Prom - 191073 191034   40                              -6.46

 5.02 PlyA - 192599 192594    6                               1.05
 5.01 Term - 194916 194610  307  2  1   26   31   806 0.860  63.29

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 142379 142260  120  2  0  121   37    96 0.842   6.27


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:3923917_4124439|GENSCAN_predicted_peptide_1|208_aa
MRGAAPAPPPAGPPLARGRRAQSAAATSAALCPDGRSPPAACRPPQGADGPARLPLPPAR
PILEAKKFKIKILASGKVILKEKVKELNLHEGVTSVHHLGGELLGPYSRRCLGDRYGDVQ
QNSRAMSIGLTSSPCGVSFCRCLIKWLEVRKVCPLCNMPVLQLAQLHRAPSWGREHCIAY
RKDQTVAGHDVCVEPGGTHVVSVWLLST

>gi568815578f:3923917_4124439|GENSCAN_predicted_CDS_1|627_bp
atgagaggcgcggcgcccgcccctcccccggcgggcccgcccctcgcgaggggccgccgg
gcgcagtcagccgccgccacctccgccgcgctctgtccggacggacgctcgccgcccgca
gcctgccgcccgccgcagggcgctgacggtcccgcacgtctgccgctgccaccggcgcgc
ccgattctagaagccaagaagttcaagatcaagatactggcatctggcaaggttatatta
aaagagaaagtaaaagaattgaatttacatgagggggtgacatccgttcaccacctagga
ggggagctccttggaccatacagcagacgttgtctgggtgacagatatggagatgttcag
cagaacagccgtgccatgagcataggactgacatcttccccctgtggtgtctccttctgc
aggtgccttattaagtggctggaggttcgtaaagtgtgtcccctgtgcaacatgccagtt
ctacagctggcccagttgcacagggccccttcctggggcagagaacattgtatagcttac
cgcaaggatcagactgttgctggacacgacgtctgtgtggagccaggaggaacacatgtg
gtgtctgtatggctgctctctacctag

>gi568815578f:3923917_4124439|GENSCAN_predicted_peptide_2|175_aa
MSSQIRQNYSTDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDAALEGVSHFFRELTEEKR
EGYERLLKMQNQRGGRALFQDIKKPAEDEWGKTPDAMKAAMALEKKLNQALLDLHALDSA
HMDPHLCDFLETHFLDEEVKLIKKMGDHLTNLHRLGGPEAGLGEYLFERLTLKHV

>gi568815578f:3923917_4124439|GENSCAN_predicted_CDS_2|528_bp
atgagctcccagattcgtcaaaattattccaccgacgtggaggcagccgtcaacagcctg
gtcaatttgtacctgcaggcctcctacacctacctctctctgggcttctatttcgaccgc
gatgatgcggctctggaaggcgtgagccacttcttccgcgaattgaccgaggagaagcgc
gagggctacgagcgtctcctgaagatgcaaaaccagcgtggcggccgcgctctcttccag
gacatcaagaagccagctgaagatgagtggggtaaaaccccagatgccatgaaagctgcc
atggccctggagaaaaagctgaaccaggcccttttggatcttcatgccctggattctgcc
cacatggacccccatctctgtgacttcctggagactcacttcctagatgaggaagtgaag
ctcatcaagaagatgggtgaccacctgacgaacctccacaggctgggaggcccagaggct
gggctgggcgagtatctcttcgaaaggctcactctcaagcacgtctaa

>gi568815578f:3923917_4124439|GENSCAN_predicted_peptide_3|188_aa
MPLKCHHGKTGRVCNVPQHAVGIVLNKQVKGKILAKRINVHIEHRKHSKSRDGFLRRVKE
NDQTKKEVKEKGTWVQPKRQPAPPREAHFVRTNEKEPELLEPLPYEFRHNRACSEIPQRN
DAAREVGTAGMMGIGQAERPGNDPKVMGSHGRVKIREDMIGFEIKKGRSSPLSATDNAKI
LWDTFEGS

>gi568815578f:3923917_4124439|GENSCAN_predicted_CDS_3|567_bp
atgcccctcaagtgtcaccatggcaaaactggaagagtctgcaatgttccccagcatgcc
gttggcattgttctaaacaaacaagttaagggcaagattcttgccaagagaattaatgtg
catattgagcacaggaagcactctaagagccgagatggcttcctgagacgcgtgaaggaa
aatgatcagacaaagaaagaagtcaaagagaaaggcacctgggttcaaccaaagcgccag
cctgctccacccagagaagcacactttgtgagaaccaatgagaaggagcctgagctgctg
gaacctcttccctatgaattcaggcataatagggcatgcagtgagatcccccagaggaat
gatgccgccagagaggttggcacagctggaatgatgggaataggccaagctgaaagacct
ggaaatgatcctaaggtaatgggaagccatggaagagttaagatcagggaggacatgatt
ggattcgagatcaagaaagggaggtcctcacccctgtcagctacggacaatgcgaagatc
ctgtgggacacctttgaaggcagctag

>gi568815578f:3923917_4124439|GENSCAN_predicted_peptide_4|215_aa
MEKTVDLESLEQPQAREVCLGVLLGLLGAKSKDLVVVQETGKGPLRIRPTCQSESLSRQG
KHCNRTVNGRAEIRTQVGPTPGNVQRQRERSPCKMHLAGDTAQQMKDLSCPRELLKNSEP
VTPSVPTGRFWTSSLGKNSMGITTVLSGPTRGRKRVNGPGTSFLWLPRAGRKWNPGQCLV
PMKDLEDTCCMADRAKGISGMVKSTYDTSTLRNME

>gi568815578f:3923917_4124439|GENSCAN_predicted_CDS_4|648_bp
atggagaagacagtggatctggagagcctagaacagccccaagcacgggaagtctgtctg
ggggtgctcctggggctgctaggagctaaatccaaagatctggtggttgttcaggaaaca
ggaaaaggacccctcaggatcaggcccacatgccagagcgagtccctcagcaggcaaggc
aaacactgcaatagaacggtaaatggcagggctgaaattcgaacccaggtgggtccgacc
ccagggaacgtacagagacagagagagaggagcccgtgcaagatgcacctggcaggagat
actgctcagcaaatgaaggacctttcatgtcctagggagctgctgaagaattctgaacca
gtgacaccatcagtcccaacgggccgcttttggacaagcagcctagggaaaaattctatg
ggaatcaccaccgttctcagcgggcccacgagagggcgaaagagagtcaacgggcctggg
acatcttttctctggctcccaagagcagggaggaagtggaatccagggcagtgcctggtc
cccatgaaggacctagaagatacctgctgcatggcagatagagctaaaggcatcagtggc
atggttaaatcaacctatgacacctcaactctcagaaatatggagtag

>gi568815578f:3923917_4124439|GENSCAN_predicted_peptide_5|102_aa
XLGNKSKTLSQKEEEEEEEEKKKKKKKKKKKKKKKKKKKRKKRKKRKKRKKRKKRKKKKK
KKKKKKKKKKKKKKKKKENRKKRKKKKKKKKRKKKKRKKKKT

>gi568815578f:3923917_4124439|GENSCAN_predicted_CDS_5|309_bp
nncctgggtaataagagcaagactctgtctcaaaaagaagaagaagaagaagaggaagaa
aagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagagg
aagaagaggaagaagaggaagaagaggaagaagaggaagaagaggaagaagaagaagaag
aagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaggagaatagg
aagaagaggaagaagaagaagaagaagaaaaagaggaagaagaagaagaggaagaagaag
aaaacctaa