GENSCAN 1.0	Date run:  6-Nov-116	Time: 20:42:32

Sequence gi568815578f:34293812_34607791 : 313980 bp : 44.21% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.09 Intr -    345    270   76  0  1   96  114    76 0.972  10.09
 1.08 Intr -   1774   1584  191  2  2   95   78   388 0.999  37.80
 1.07 Intr -   9520   9432   89  0  2   16  109    79 0.570   2.41
 1.06 Intr -   9845   9707  139  0  1   43  117   102 0.388   8.12
 1.05 Intr -  17593  17470  124  1  1   49   36    87 0.287  -0.24
 1.04 Intr -  22385  22275  111  2  0   74   59    83 0.561   4.58
 1.03 Intr -  38953  38794  160  0  1   93   29   126 0.346   7.19
 1.02 Intr -  40083  40053   31  1  1  106   77    30 0.756   0.89
 1.01 Init -  42065  41993   73  2  1   71  109    18 0.707   2.08
 1.00 Prom -  54129  54090   40                              -2.86

 2.00 Prom +  79059  79098   40                              -3.16
 2.01 Init + 100046 100070   25  1  1   79  119    -2 0.117   1.76
 2.02 Intr + 119931 120068  138  1  0   85  106    69 0.925   8.84
 2.03 Intr + 130669 130714   46  2  1   40  121    70 0.093   2.97
 2.04 Intr + 144663 144820  158  0  2  111   72    65 0.369   6.85
 2.05 Intr + 146344 146533  190  2  1   47   92    19 0.247  -3.16
 2.06 Intr + 151476 151650  175  0  1   73   72    56 0.278   2.44
 2.07 Intr + 155600 155669   70  1  1  101   98    32 0.896   4.25
 2.08 Intr + 163579 163663   85  2  1   67   90    47 0.898   1.68
 2.09 Intr + 168282 168410  129  0  0   79   95    96 0.961   9.21
 2.10 Intr + 176237 176309   73  2  1   87   92    95 0.992   9.21
 2.11 Term + 178740 178835   96  2  0   48   53   120 0.959   2.47
 2.12 PlyA + 179294 179299    6                               1.05

 3.02 PlyA - 179523 179518    6                               1.05
 3.01 Sngl - 182663 182199  465  2  0   84   48   397 0.759  29.45
 3.00 Prom - 184191 184152   40                              -9.75

 4.00 Prom + 185679 185718   40                              -5.66
 4.01 Init + 185859 185978  120  2  0   22  115    61 0.787   2.39
 4.02 Intr + 186788 186921  134  1  2   87   97    60 0.994   6.24
 4.03 Intr + 187255 187395  141  1  0   52   94   106 0.876   7.07
 4.04 Intr + 195455 195575  121  2  1   42   80    54 0.200   0.50
 4.05 Intr + 196011 196115  105  2  0   63   72    44 0.564   0.71
 4.06 Intr + 198690 198786   97  2  1   32   71   112 0.839   3.48
 4.07 Intr + 210520 210592   73  2  1   73  119    34 0.901   3.46
 4.08 Intr + 213884 213979   96  2  0   58   -6   139 0.012   0.62
 4.09 Intr + 218338 218389   52  1  1   45   76    30 0.008  -3.59
 4.10 Intr + 222573 222650   78  2  0   57   89    92 0.025   5.95
 4.11 Intr + 232457 232532   76  1  1  103  107   113 0.995  13.79
 4.12 Intr + 240817 240984  168  2  0  117  110   268 0.995  31.82
 4.13 Intr + 244932 245170  239  1  2   64   40    57 0.105  -4.17
 4.14 Intr + 251116 251265  150  0  0   76   86   111 0.747  10.06
 4.15 Intr + 264530 264607   78  1  0   91   85    77 0.828   7.45
 4.16 Intr + 264884 265097  214  1  1   32   85    71 0.650  -0.51
 4.17 Intr + 265397 265452   56  0  2   86  117    95 0.886  10.90
 4.18 Intr + 265536 265642  107  2  2  112   90   255 0.622  27.11
 4.19 Term + 265925 266087  163  2  1   67   52   360 0.623  27.71
 4.20 PlyA + 266508 266513    6                               1.05

 5.09 PlyA - 266757 266752    6                               1.05
 5.08 Term - 267168 267055  114  0  0  126   47   194 0.999  17.67
 5.07 Intr - 270329 270303   27  2  0  100   75    24 0.407   0.61
 5.06 Intr - 272654 272544  111  2  0    9   54   121 0.108   1.38
 5.05 Intr - 281435 281293  143  0  2  108  110   138 0.997  18.07
 5.04 Intr - 287861 287737  125  1  2  113   76   180 0.990  19.53
 5.03 Intr - 291769 291626  144  0  0   84  106   113 0.967  12.10
 5.02 Intr - 294796 294642  155  1  2   96   92    46 0.535   4.67
 5.01 Intr - 301720 301665   56  2  2  101   81    33 0.530   2.60

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 213884 213983  100  2  1   58   32   146 0.889   3.60
S.002 Init - 221882 221822   61  2  1   86   94    45 0.842   4.93
S.003 Init + 229773 229820   48  2  0   93   85     2 0.892   0.04


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:34293812_34607791|GENSCAN_predicted_peptide_1|332_aa
MYPQVSSILEAFMLEILSFSFQWAAFPPHKTLKEWREHVSECGIWPATPSTDTGASSMRA
RGHTRCIASRGTWRHPGKDACDPEAPERTPRAAIMKYHAFGGLQQQKFILSQFWKPEVQN
QGIGRKLHWGLDLEKGHQQLTSRAAFSGVGGDPQGSTVSSFLYIQPDEEIEAQGSELAEF
QFRWVLTLNQLAEPARGRPGWLSGLSRRSLPDRSCSQTEAQPPSPVSITSAASMSDKLPY
KVADIGLAAWGRKALDIAENEMPGLMRMRERYSASKPLKGARIAGCLHMTVETAVLIETL
VTLGAEVQWSSCNIFSTQDHAAAAIAKAGIPX

>gi568815578f:34293812_34607791|GENSCAN_predicted_CDS_1|996_bp
atgtacccacaggtctcctctatcctggaggcattcatgcttgagatcctgagcttctca
ttccaatgggcagcttttcctccgcataagaccctgaaggaatggagggagcacgtgagt
gagtgcgggatctggccagccactccaagcactgacacaggagcaagctccatgcgggcc
cgtggacacaccaggtgtattgcctcaagggggacatggcggcatccaggcaaggatgcc
tgcgaccctgaagccccagagaggactcccagagctgccattatgaagtaccacgcattt
ggtggcttacaacaacagaaatttattctctcacagttctggaagccagaagtccaaaat
caaggcattggcaggaagctccactggggcctggacctggagaagggacatcaacagtta
acgtccagggcagctttcagcggcgtgggcggggatccccagggaagcactgttagcagt
ttcttgtacatccagcctgatgaggaaattgaggcacagggaagtgaactggcggaattt
cagttccgctgggttttgacactgaatcaactggctgaaccagcgagaggacggcccggc
tggctctcaggcctctcccggcgctcccttccggaccgttcctgttcccagactgaggcc
cagcccccttcgcccgtttccatcacgagtgccgccagcatgtctgacaaactgccctac
aaagtcgccgacatcggcctggctgcctggggacgcaaggccctggacattgctgagaac
gagatgccgggcctgatgcgtatgcgggagcggtactcggcctccaagccactgaagggc
gcccgcatcgctggctgcctgcacatgaccgtggagacggccgtcctcattgagaccctc
gtcaccctgggtgctgaggtgcagtggtccagctgcaacatcttctccacccaggaccat
gcggcggctgccattgccaaggctggcattccggnn

>gi568815578f:34293812_34607791|GENSCAN_predicted_peptide_2|394_aa
MKSQLQITVEEVVVTLQLGGDKEPTETIGDLSICLDGLQLESEVVTNGETTCSESASQND
DGSRSKDETRVSTNGSDDPEDAGAGENRRVSGNNSPSLSNGGFKPSRPPRPSRPPPPTPR
RPASVNGSPSATSESDGSSTGSLPPTNTNTNTSEGATSGLIIPLTISGGSGPRPLNPVTQ
APLPPGWERRVDNMGRIYYVDHFTRTTTWQRPTLESVRNYEQWQLQRSQLQGAMQQFNQR
FIYGNQDLFATSQSKEFDPLGPLPPGWEKRTDSNGRVYFVNHNTRITQWEDPRSQGQLNE
KPLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTGKSALDNGPQIAYVRDFKAKVQYFRF
WCQPDVEVIIFKHQWYCSNYSFKKYGIECKGKRG

>gi568815578f:34293812_34607791|GENSCAN_predicted_CDS_2|1185_bp
atgaaatcacagcttcagatcactgttgaagaagtagttgtgactttgcagcttggaggt
gacaaagagccaacagagacaataggagacttgtcaatttgtcttgatgggctacagtta
gagtctgaagttgttaccaatggtgaaactacatgttcagaaagtgcttctcagaatgat
gatggctccagatccaaggatgaaacaagagtgagcacaaatggatcagatgaccctgaa
gatgcaggagctggtgaaaataggagagtcagtgggaataattctccatcactctcaaat
ggtggttttaaaccttctagacctccaagaccttcacgaccaccaccacccaccccacgt
agaccagcatctgtcaatggttcaccatctgccacttctgaaagtgatgggtctagtaca
ggctctctgccgccgacaaatacaaatacaaatacatctgaaggagcaacatctggatta
ataattcctcttactatatctggaggctcaggccctaggccattaaatcctgtaactcaa
gctcccttgccacctggctgggaacggcgggttgacaacatgggacgtatttattatgtt
gaccatttcacaagaacaacaacgtggcagaggccaacactggaatccgtccggaactat
gaacaatggcagctacagcgtagtcagcttcaaggagcaatgcagcagtttaaccagaga
ttcatttatgggaatcaagatttatttgctacatcacaaagtaaagaatttgatcctctt
ggtccattgccacctggatgggagaagagaacagacagcaatggcagagtatatttcgtc
aaccacaacacacgaattacacaatgggaagaccccagaagtcaaggtcaattaaatgaa
aagcccttacctgaaggttgggaaatgagattcacagtggatggaattccatattttgtg
gaccacaatagaagaactaccacctatatagatccccgcacaggaaaatctgccctagac
aatggacctcagatagcctatgttcgggacttcaaagcaaaggttcagtatttccggttc
tggtgtcagccagatgtggaagtgattattttcaagcaccagtggtattgtagcaactac
agcttcaagaagtacggaattgaatgcaaagggaaaagaggttga

>gi568815578f:34293812_34607791|GENSCAN_predicted_peptide_3|154_aa
MAAAGGARLLRAASAVLGDPAGRWLHHAGSRAGASGLLRSRGPGRSAEASRPLSVSAGAR
SSSEDKVTVHFINCDGETLTTKGKVGDSLLDVVVENNPDIDGFGACEGTLACLTCHLIFE
DHIYEKLDAITDEENHMLDLAYGLTDHSWAAKSV

>gi568815578f:34293812_34607791|GENSCAN_predicted_CDS_3|465_bp
atggctgccgctgggggcgcccggctgctgcgcgccgcttctgcggtcctcggcgacccg
gccggccggtggctgcaccacgccgggtcccgcgctggagccagcggcctgctgaggagc
cggggaccgggccggagcgcggaggcgagccggccgctgagcgtgtcggcaggggcgcgg
agcagctcagaagataaagtgacagtccactttataaactgtgatggtgaaacattaaca
accaaaggaaaagttggtgattctctgctagacgttgtggttgaaaataatccagatatt
gatggctttggtgcatgtgagggaactctggcttgtttaacctgtcatctcatctttgaa
gatcacatatatgagaagttagatgcaatcactgatgaggagaatcacatgctcgatctg
gcatatggactaacagatcacagttgggctgccaaatctgtttga

>gi568815578f:34293812_34607791|GENSCAN_predicted_peptide_4|755_aa
MYCLFEYAGKDNYCLQINPASYINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRI
LNKPVGLKDLESIDPEFYNSLIWVKENNIEECDLEMYFSVDKEILGEIKSHDLKPNGGNI
LVTEENKEEYIRMVAEWRLSRGVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQE
IDLNDWQRHAIYRHYARTSKQIMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMG
SNGPQKFCIEKVGKENWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQDAETV
VMEACVIEIWPATKPLRRRRKAQDSLSVRYAGLPDRSEMAEVEETLKRLQSQKGVQGIIV
VNTEGIPIKSTMDNPTTTQYASLMHSFILKARSTVRDIDPQNDLTFLRIRSKKNEIMVAP
AHLRGKNQALGLALNSHKVTWLRSCHFAHAQQGAADQGSSEYGVKPRSLSPLHLWIYPGL
GKPFNSLRLRVLRVTRGFTELLYRPHSQQKCELAWDHLVSQSRLLLVLLLYVAIGPENMP
WGVSAETKMKPREGAGPLAPAVSHGAQNRVSPDTDSECCDLTSPGELPPAAAAAVLSASP
GALEREARSPRSPQTADTSPRPRAPACAPSRARAMPSDRPFKQRRSFADRCKEVQQIRDQ
HPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQH
SMVSVSTPIADIYEQEKDEDGFLYMVYASQETFGF

>gi568815578f:34293812_34607791|GENSCAN_predicted_CDS_4|2268_bp
atgtattgcctgtttgaatatgcagggaaggataactactgcttgcagataaaccccgct
tcttacatcaatccagatcacctgaaatattttcgttttattggcagatttattgccatg
gctctgttccatgggaaattcatagacacgggtttttctttaccattctataagcgtatc
ttgaacaaaccagttggactcaaggatttagaatctattgatccagaattttacaattct
ctcatctgggttaaggaaaacaatattgaggaatgtgatttggaaatgtacttctccgtt
gacaaagaaattctaggtgaaattaagagtcatgatctgaaacctaatggtggcaatatt
cttgtaacagaagaaaataaagaggaatacatcagaatggtagctgagtggaggttgtct
cgaggtgttgaagaacagacacaagctttctttgaaggctttaatgaaattcttccccag
caatatttgcaatactttgatgcaaaggaattagaggtccttttatgtggaatgcaagag
attgatttgaatgactggcaaagacatgccatctaccgtcattatgcaaggaccagcaaa
caaatcatgtggttttggcagtttgttaaagaaattgataatgagaagagaatgagactt
ctgcagtttgttactggaacctgccgattgccagtaggaggatttgctgatctcatgggg
agcaatggaccacagaaattctgcattgaaaaagttgggaaagaaaattggctacccaga
agtcatacctgttttaatcgcctggacctgccaccatacaagagctatgagcaactgaag
gaaaagctgttgtttgccatagaagaaacagaaggatttggacaagatgctgaaacagtt
gttatggaggcctgcgttattgagatctggcctgccacgaaacctttgcgcaggcgcaga
aaggcacaggactcgctaagtgttcgctacgcggggctaccggatcggtcggaaatggca
gaggtggaggagacactgaagcgactgcagagccagaagggagtgcagggaatcatcgtc
gtgaacacagaaggcattcccatcaagagcaccatggacaaccccaccaccacccagtat
gccagcctcatgcacagcttcatcctgaaggcacggagcaccgtgcgtgacatcgacccc
cagaacgatctcaccttccttcgaattcgctccaagaaaaatgaaattatggttgcacca
gcccatcttcgtgggaagaaccaagctttaggcttggctctgaacagccacaaagtgact
tggctgaggtcctgccatttcgctcatgctcagcagggggcagcagaccagggcagttca
gagtatggggtcaaacccaggtccctgtccccactccacctgtggatttaccctggattg
ggcaagccctttaactctctgaggctccgtgttctcagagtgactcgaggattcactgag
ctcctttatagaccacattcccagcagaagtgtgagctcgcttgggaccacctggtgtca
cagtccaggctgctgctggtcctgctcctctacgtggcaatcggcccagagaatatgcct
tggggggtctcagcagaaactaagatgaagccccgtgaaggcgccgggcctttggctccg
gctgtttcccacggcgcccagaaccgcgtcagtcctgacacagactcggaatgttgtgac
ctgacgtcaccgggcgagttacctcccgcagccgcagccgccgtgctcagcgcgagcccc
ggagcccttgagcgcgaggcgcggagcccccggagcccccaaaccgcagacacatccccg
cgccccagagccccggcctgcgcgcccagccgggcccgcgcgatgccctcagaccggcct
ttcaagcagcggcggagcttcgccgaccgctgtaaggaggtacagcagatccgcgaccag
caccccagcaaaatcccggtgatcatcgagcgctacaagggtgagaagcagctgcccgtc
ctggacaagaccaagtttttggtcccggaccatgtcaacatgagcgagttggtcaagatc
atccggcgccgcctgcagctgaaccccacgcaggccttcttcctgctggtgaaccagcac
agcatggtgagtgtgtccacgcccatcgcggacatctacgagcaggagaaagacgaggac
ggcttcctctatatggtctacgcctcccaggaaaccttcggcttctga

>gi568815578f:34293812_34607791|GENSCAN_predicted_peptide_5|291_aa
XNYSLPSVFVVDWFQDLLQRQYIPVKMKSKAFWIFSWEYAMMYVGSLVVIICLSFFLLSS
WDFIPAVYGFILSVPDLTPNIGLFWYFFAEMFEHFSLFFVCVFQINVFFYTIPLAIKLKE
HPIFFMFIQIAVIAIFKSYPTVGDVALYMAFFPVWNHLYRFLRNIFVLTCIIIVCSLLFP
VLWHLWIYAGSANSNFFYAITLTFNVGQLPHELFIMVPEGGGPGALMAAIERNVDRAVPG
GSAERDPIERSTLHILLISDYFYAFLRREYYLTHGLYLTAKDGTEAMLVLK

>gi568815578f:34293812_34607791|GENSCAN_predicted_CDS_5|876_bp
ngtaattacagtcttccctcggtatttgtggtggattggttccaggacctcctgcagcgg
cagtacatacctgtgaaaatgaagagcaaagccttctggatcttttcttgggagtatgcc
atgatgtatgtgggaagcctagtggtaatcatttgcctctccttcttccttctcagctct
tgggatttcatccccgcagtctatggctttatactttctgttccagatctcactccaaac
attggtcttttctggtacttctttgcagagatgtttgagcacttcagcctcttctttgta
tgtgtgtttcagatcaacgtcttcttctacaccatccccttagccataaagctaaaggag
caccccatcttcttcatgtttatccagatcgctgtcatcgccatctttaagtcctacccg
acagtgggggacgtggcgctctacatggccttcttccccgtgtggaaccatctctacaga
ttcctgagaaacatctttgtcctcacctgcatcatcatcgtctgttccctgctcttccct
gtcctgtggcacctctggatttatgcaggaagtgccaactctaatttcttttatgccatc
acactgaccttcaacgttgggcagctgccccatgagctcttcatcatggtcccagaggga
ggcggccctggagccctcatggctgccatagagaggaatgtggaccgagccgtccctggg
ggcagcgctgagagggaccccatcgagaggtccacattacatatcctgctcatctctgat
tacttctatgccttcctgcggcgggagtactacctcacacatggcctctacttgaccgcc
aaggatggcacagaggccatgctcgtgctcaagtag