GENSCAN 1.0	Date run:  5-Nov-116	Time: 10:54:36

Sequence gi568815578f:33506956_33744643 : 237688 bp : 46.48% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 Intr -   3177   3094   84  1  0   95   75    45 0.017   3.69
 1.02 Intr -  14670  14587   84  1  0   84   76    31 0.145   1.29
 1.01 Init -  24490  24442   49  1  1   65   65    44 0.237   0.91
 1.00 Prom -  30600  30561   40                              -1.66

 2.00 Prom +  60974  61013   40                              -2.86
 2.01 Init +  75350  75352    3  1  0  113   81     0 0.064   1.80
 2.02 Intr + 104198 104380  183  1  0   77  103   188 0.560  19.18
 2.03 Intr + 116160 116341  182  2  2   74   83   202 0.915  16.97
 2.04 Intr + 117809 118062  254  2  2   99   99   110 0.907  10.28
 2.05 Intr + 121395 121480   86  1  2   57   66    71 0.956   1.34
 2.06 Intr + 122764 122959  196  0  1   79   91    93 0.969   7.69
 2.07 Intr + 129685 129714   30  2  0  124   92    11 0.652   3.20
 2.08 Intr + 133386 133576  191  1  2   83   55   280 0.949  23.50
 2.09 Term + 137392 137691  300  0  0  101   52   236 0.856  16.52
 2.10 PlyA + 138280 138285    6                               1.05

 3.13 PlyA - 140320 140315    6                               1.05
 3.12 Term - 141280 141266   15  1  0   78   49     0 0.210  -6.66
 3.11 Intr - 142498 142427   72  1  0   56   66   105 0.830   4.70
 3.10 Intr - 143301 143143  159  0  0   96   72    97 0.943   9.08
 3.09 Intr - 147595 147555   41  2  2   62  109    29 0.781   0.34
 3.08 Intr - 151078 150987   92  0  2   45   85   204 0.997  15.44
 3.07 Intr - 151599 151522   78  2  0   87   86    78 0.986   6.17
 3.06 Intr - 151879 151767  113  1  2   82   73   143 0.681  11.38
 3.05 Intr - 152595 152542   54  0  0   93   85    62 0.924   5.58
 3.04 Intr - 152777 152698   80  0  2   78  100   133 0.944  12.77
 3.03 Intr - 153048 152930  119  2  2  110   85    82 0.999  10.21
 3.02 Intr - 153440 153304  137  2  2  110   80   213 0.988  22.07
 3.01 Init - 153708 153664   45  0  0   95   76   -15 0.760  -1.08
 3.00 Prom - 153944 153905   40                             -15.35

 4.00 Prom + 154271 154310   40                              -7.36
 4.01 Init + 155391 155516  126  2  0   72   40   160 0.845   9.76
 4.02 Intr + 156577 156884  308  0  2   99    7   368 0.897  25.05
 4.03 Intr + 159546 159564   19  0  1   97   94    11 0.723  -0.79
 4.04 Term + 160042 161280 1239  0  0    2   47  1796 0.817 158.50
 4.05 PlyA + 161538 161543    6                               1.05

 5.07 PlyA - 161880 161875    6                              -0.45
 5.06 Term - 162152 162141   12  2  0   74   35    11 0.466  -7.40
 5.05 Intr - 162517 162420   98  2  2   93  105   133 0.715  15.23
 5.04 Intr - 162757 162732   26  0  2  102   89    25 0.995   1.67
 5.03 Intr - 163837 163729  109  2  1  114   72   122 0.998  12.54
 5.02 Intr - 165467 165443   25  2  1  127  101    36 0.992   6.40
 5.01 Init - 167397 167269  129  0  0  121   86   205 0.964  21.75
 5.00 Prom - 168372 168333   40                             -13.87

 6.09 PlyA - 168748 168743    6                               1.05
 6.08 Term - 170024 169777  248  0  2  110   48   471 0.999  41.25
 6.07 Intr - 170375 170150  226  2  1   89   98    81 0.916   6.76
 6.06 Intr - 170563 170471   93  1  0   43   78    86 0.656   3.26
 6.05 Intr - 171398 171224  175  1  1  111   37   275 0.995  24.64
 6.04 Intr - 173019 172800  220  1  1   70   37   458 0.997  36.26
 6.03 Intr - 173461 173371   91  1  1  122   77    60 0.987   7.87
 6.02 Intr - 178824 178699  126  0  0   85   42    68 0.712   2.78
 6.01 Init - 179309 179049  261  2  0   94   80   484 0.998  43.26
 6.00 Prom - 182104 182065   40                              -3.76

 7.05 PlyA - 182912 182907    6                               1.05
 7.04 Term - 201014 200751  264  2  0  103   38   314 0.992  23.41
 7.03 Intr - 203798 203600  199  1  1   29  103   235 0.942  18.45
 7.02 Intr - 207781 207719   63  0  0  106   86    98 0.863   9.23
 7.01 Init - 213252 213140  113  0  2   72   56   213 0.500  16.32
 7.00 Prom - 213687 213648   40                              -4.86

 8.03 PlyA - 215177 215172    6                               1.05
 8.02 Term - 225173 224772  402  2  0   77   35   303 0.985  19.05
 8.01 Intr - 235905 235759  147  0  0   68   59    62 0.146   1.73

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:33506956_33744643|GENSCAN_predicted_peptide_1|73_aa
MHFKILNTDEEDIQQQYGTAAVKVKHLDSMQFIRTMLAVDQASPGTWTQLETIILSKLSQ
GQKTKHRMFSLTX

>gi568815578f:33506956_33744643|GENSCAN_predicted_CDS_1|219_bp
atgcatttcaaaatcctaaacacagatgaagaggatatacagcagcagtatggtacagct
gcagttaaagtaaaacacctggactccatgcagtttattagaacaatgttagctgtagat
caggcaagcccagggacatggacgcagctggaaaccatcattctgagcaaactatcacaa
ggacagaaaaccaaacaccgcatgttctcactcacagnn

>gi568815578f:33506956_33744643|GENSCAN_predicted_peptide_2|474_aa
MRFSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLA
LVANLPLLQRELLHCARAAKQTPSQYLAQHEHLLLNTSIASPADSSELLMEVHGNGKRPS
PERREENSFDRDTIAPEPPAKRVCTISPAPRHSPALTVPLMNPGGQFHPTPPPLQHYTLE
DIATSHLYREPNKMLEHREVRDRHHSLGLNGGYQDELVDHRLTEREWADEWKHLDHALNC
IMEMVEKTRRSMAVLRRCQESDREELNYWKRRYNENTELRKTGTELVSRQHSPGSADSLS
NDSQREFNSRPEEAVNKVKIQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAA
EDAFLVINEQEESTENCWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQ
SPHGQGRPLLPVGRGSSARSADCSVPSPALDKTSATTSRSSTPASVTAIDTNGL

>gi568815578f:33506956_33744643|GENSCAN_predicted_CDS_2|1425_bp
atgagattcagcaatggtcctgcctcctccacatcatctgcactcacaaatcagcaattg
ccagccacttgtggtgctcgacaactcagcaagttgaaacgctttcttaccactctgcaa
cagtttggcaatgacatctcccctgagattggggagaaggtgcggactcttgttcttgca
ctggtggccaacctgcccctgctgcagcgggaactgctgcactgcgctcgggcggccaag
cagaccccatcccagtacctggctcagcacgaacaccttctgctcaacacaagcattgca
tcgcctgctgactcgtcagagttgctcatggaggtgcacggaaatgggaagaggcccagt
ccagagaggagagaagagaatagttttgatagagacacaattgctcctgagcctcctgcc
aagagagtatgtaccatcagccctgctcctcggcacagtcctgctctcactgtgcccctc
atgaatcccgggggccaattccatcctacccctccacctcttcagcattacaccttagag
gatattgcaacttctcacctgtatcgggaacccaacaagatgctagagcatcgagaagtt
cgtgatagacaccacagtcttggtctaaatggaggctatcaagatgagttggtagatcat
cgtttgacagaaagggaatgggctgatgaatggaaacatcttgaccatgcgctgaattgc
attatggaaatggtagagaaaacaaggcgctctatggcagttctgcggcgctgtcaggaa
tcagatcgtgaagaactcaactactggaaaagacggtacaatgaaaacacagagctgagg
aaaacggggaccgagttggtctccaggcagcacagccctgggagtgcagattctctcagc
aatgattctcagagagagttcaacagcaggccagaagaagctgtgaataaggtgaaaatt
caggccatgtcagaagtacagaaggccgtcgctgaggcagagcagaaagcctttgaagtg
attgcaacagagagagcacgaatggagcaaaccatagcggatgtcaagcggcaggccgca
gaggatgctttcctcgtcatcaatgagcaagaggagtccacggagaactgctggaactgt
ggccgcaaagccagcgagacatgcagtggctgcaatatcgcgcgatactgtggctctttc
tgccagcacaaggactgggagcggcaccaccgcctctgtggtcagaacctgcatggccag
agcccccacggccagggccggccgctgcttcctgtaggcaggggctcctctgccaggtcc
gccgactgcagcgtgcccagcccagccctcgacaagacctcggcaaccacatcgcgttcc
tcaacacctgcttctgtgacagctatcgacaccaacggactctga

>gi568815578f:33506956_33744643|GENSCAN_predicted_peptide_3|334_aa
MRSREARHFAGQMPPEYERASKVDQFVTRFLLRETVSQLQALQSSLEGASDTLEAQAHGW
RSDAESVEAQSRLCGSRRAGRRALRSVSRSSTWSPGSSDTGRSSEAEMQWRLQVNRLQEL
IDQLECKAPRLEPLREEDLAKGPDLHILMAQRQVQVAEEGLQDFHRALRCYVDFTGAQSH
CLHVSAQKMLDGASFTLYEFWQDEASWRRHQQSPGSKAFQRILIDHLRAPDTLTTVFFPA
TRPPQKRFHCKEQGTDQLVQLAFQRGQFQAHGVQTPPASCPWMLFRPRLEPVEAPLSLFL
KDLGIRLTMEKVTCTIIFGNEHVDARGKRQFLGF

>gi568815578f:33506956_33744643|GENSCAN_predicted_CDS_3|1005_bp
atgaggtccagagaggccaggcacttcgctgggcagatgccccctgagtacgagagggcc
tccaaagtggaccagtttgtgacgcgcttcctgctgcgggagacggtgagccagctgcaa
gcccttcagagctcgctggagggggcgtcagataccctggaggcccaggcccatggctgg
cggtcagatgcagagagcgtggaggcgcagagcaggctctgcggcagccggcgggcagga
cgccgagccctgaggagtgtcagccggtcatccacctggtcccccggctcttctgacaca
gggcgcagctcagaggccgagatgcagtggcggctccaggtgaaccgcctccaggagctc
atcgaccagctcgagtgcaaggccccccggctggaacccctgcgtgaagaggacctggcc
aaggggcctgacttgcacatcctcatggcccagaggcaggtccaggtggcagaggaaggc
ctgcaggacttccaccgagccctgcgctgctatgtggacttcacaggggcccagagccat
tgtctgcatgtgtccgcccagaagatgctggacggtgcctccttcaccctgtatgagttc
tggcaggatgaggcctcctggagaaggcaccagcagtcgcctggcagcaaggccttccag
cgcatcctcatcgaccacctgcgggccccggacaccctcaccactgtgttcttcccagcc
acccgtccgccacagaaacgcttccactgtaaggagcagggcactgaccagttggtgcag
ctggctttccagagaggccagttccaggcacatggggtgcagacaccccctgcttcatgc
ccttggatgctcttcaggccacgactagaaccagttgaggcccctctctccctcttcctc
aaggatttgggaattaggctcacgatggaaaaggtcacctgcaccatcatctttggaaat
gagcacgtcgatgcccgaggaaagaggcagtttctaggtttctga

>gi568815578f:33506956_33744643|GENSCAN_predicted_peptide_4|563_aa
MGNYSSHKRTKAPKQARKERPADMDKAWWKSFLNHLTRKKPATRIVLILPLDKRQPLANA
GQRIDYASGAGLGSPAAPRLRGAGEGSEREPRMPVLLLLRRQEARRPEEGGARAALSWPR
LLSRFRSPGKAPREAGPAEEQPRKRNFRQAQDRGREVSGRRSRVARRSGAFSPAAGPSPK
VASVSGSRRVHRPSSLGRIAVVVDQGSGFTKAGFAGENQPRIVLKSSSLVPSWDRPVLPG
APGCELAGGVARAHPIKHGVVADWEALEGLWERLLVGGLRVCPEQWPVLVSDSPLAPPAG
RERVAELLFETLAVPACHMASTALLALCSTGAFSGLAVEAGAGVCHATPIYAGHSWHQAT
FRLNVAGSTLSRYLRDLLVAANPDLLQQALPRKAITHLKKRSCYVSLDFEGDLRDPARHH
PASFSVGNGCCVCLSSERFRCPEPIFQPGLLGQAEQGLPALAFRALQKMPKTLRTRLADT
VVLAGGSTLFPGFAERLDKELEAQCRRHGYAALRPHLVAKHGRGMAVWTGGSMVASLHSF
QRRWITRAMYQECGSRLLYDVFN

>gi568815578f:33506956_33744643|GENSCAN_predicted_CDS_4|1692_bp
atgggaaactatagttcccacaaaaggaccaaagcacccaagcaggcccgcaaggagagg
ccggctgacatggacaaggcctggtggaaatcgttcctcaaccacctcactcggaagaag
ccggctaccaggatcgtgctgattctccccctggacaagcggcagccgctggccaacgct
gggcaacggattgactacgcgtccggcgctgggctgggctccccggcggcacccagattg
cgcggagcgggcgaaggtagcgagcgcgagccgaggatgccggtactgctgctgctgcgg
cggcaagaggcgcggcggccggaagagggcggggccagggcagctctgagctggccgcgg
ctgctctcgcgcttccggtccccggggaaggctccccgcgaagccggccccgccgaggag
cagccgcgcaaacggaacttccgtcaagcccaggacagaggccgggaggtatcgggccga
cgaagccgagtggcgcggaggagcggagccttcagccccgcggctgggccgagcccgaag
gtggcgtcggtgtcggggagccgccgcgtgcaccggccgtcctccctgggccgcatcgcg
gtggtggtggaccagggctcgggcttcaccaaggcgggcttcgcgggcgagaaccagccg
cgcatagtgctgaagagctctagcttggtgcccagctgggaccggccggtgctgcccgga
gcgccgggctgcgagctggcgggcggcgtggcgcgggcgcaccccatcaagcacggcgtg
gtggcggactgggaggcgctggaagggctgtgggagcgcctgctggtgggcggcctgcgg
gtgtgcccagagcagtggcccgtgctggtgagcgactcgccgttggcgccgcccgcgggc
cgcgaaagggtggcggagctgctgttcgagaccctggcagtgcccgcgtgccacatggct
agcaccgcgttgctggcgctctgctccaccggcgcgttcagcgggctggccgtggaggcg
ggcgcgggcgtgtgccacgccacgcccatctacgcgggtcactcgtggcaccaggccacc
ttccgactgaacgtggcaggcagcaccctgtcgcgctacctgcgggatctgctggtggcg
gcgaaccctgacctcttgcagcaggccctgccccgcaaggccatcacacatctcaagaag
cgcagctgctacgtgtccctggacttcgagggcgacctccgcgaccccgcccgccaccat
ccggccagtttcagcgtgggtaacgggtgctgcgtctgcctcagcagtgagcgcttccgc
tgccccgaacccatcttccagccgggcctgctgggccaggctgagcaggggctgcccgcg
ctggccttccgggcgctgcagaagatgcccaaaacgctgcggacacgcctggcagacacc
gtggtgctagccggcggctccacactgtttcctggcttcgccgagcgcctggacaaggag
ctggaggcgcagtgccggcggcacggctacgcggccctgcggccccacctggtggccaag
catgggcgtggcatggctgtgtggaccggcggctccatggtggcctccctgcactccttc
cagcgccgctggataactcgggccatgtaccaggagtgtggctccaggctgctgtacgat
gtgttcaactga

>gi568815578f:33506956_33744643|GENSCAN_predicted_peptide_5|132_aa
MACAGLLTVCLLRPPAPQPQPQTPRHPQLAPDPGPAGHTLFQDVFRRADKNDDGKLSFEE
FQNYFADGVLSLGELQELFSGIDGHLTDNLETEKLCDYFSEHLGVYRPVLAALESLNRAV
LAAMDATKLHPE

>gi568815578f:33506956_33744643|GENSCAN_predicted_CDS_5|399_bp
atggcgtgcgcggggctgctcaccgtgtgcctgctccggccgcccgcgccccagccccag
ccccagaccccgcggcacccccagctcgcgcccgacccggggcccgccggacacacgctc
ttccaggacgttttccgcagagcagacaagaatgatgatgggaagctctcatttgaggaa
ttccagaattactttgccgatggggttctcagcctgggggagctgcaggaactgttcagc
ggcattgatgggcatctcaccgacaatttagaaacagaaaaactgtgtgactacttctca
gagcacctgggtgtctaccggccggtgctggctgcattggaatcgctgaaccgtgcagtg
ctcgctgccatggatgccaccaagctgcacccagaataa

>gi568815578f:33506956_33744643|GENSCAN_predicted_peptide_6|479_aa
MALAGAPAGGPCAPALEALLGAGALRLLDSSQIVIISAAQDASAPPAPTGPAAPAAGPCD
PDLLLFATPQAPRPTPSAPRPALGRPPLPHRSLPSVGLSDNNSPRVFNWRLLHARPLGDF
KPAKTHNPAVKRRLDLETDHQYLAESSGPARGRGRHPGKGVKSPGEKSRYETSLNLTTKR
FLELLSHSADGVVDLNWAAEVLKVQKRRIYDITNVLEGIQLIAKKSKNHIQWLGSHTTVG
VGGRLEGLTQDLRQLQESEQQLDHLMNICTTQLRLLSEDTDSQRYPWIGRRDLRSIADPA
EQMVMVIKAPPETQLQAVDSSENFQISLKSKQGPIDVFLCPEETVGGISPGKTPSQEVTS
EEENRATDSATIVSPPPSSPPSSLTTDPSQSLLSLEQEPLLSRMGSLRAPVDEDRLSPLV
AADSLLEHVREDFSGLLPEEFISLSPPHEALDYHFGLEEGEGIRDLFDCDFGDLTPLDF

>gi568815578f:33506956_33744643|GENSCAN_predicted_CDS_6|1440_bp
atggccttggccggggcccctgcgggcggcccatgcgcgccggcgctggaggccctgctc
ggggccggcgcgctgcggctgctcgactcctcgcagatcgtcatcatctccgccgcgcag
gacgccagcgccccgccggctcccaccggccccgcggcgcccgccgccggcccctgcgac
cctgacctgctgctcttcgccacaccgcaggcgccccggcccacacccagtgcgccgcgg
cccgcgctcggccgcccgccgcttcctcaccggagcctccccagcgtcggactcagtgat
aataatagcccacgtgtattcaactggcgtttactgcatgccaggcctttgggcgacttc
aagccagctaaaactcacaaccccgctgtgaagcggaggctggacctggaaactgaccat
cagtacctggccgagagcagtgggccagctcggggcagaggccgccatccaggaaaaggt
gtgaaatccccgggggagaagtcacgctatgagacctcactgaatctgaccaccaagcgc
ttcctggagctgctgagccactcggctgacggtgtcgtcgacctgaactgggctgccgag
gtgctgaaggtgcagaagcggcgcatctatgacatcaccaacgtccttgagggcatccag
ctcattgccaagaagtccaagaaccacatccagtggctgggcagccacaccacagtgggc
gtcggcggacggcttgaggggttgacccaggacctccgacagctgcaggagagcgagcag
cagctggaccacctgatgaatatctgtactacgcagctgcgcctgctctccgaggacact
gacagccagcgatatccttggattggccgtagggaccttcgtagcattgcagaccctgca
gagcagatggttatggtgatcaaagcccctcctgagacccagctccaagccgtggactct
tcggagaactttcagatctcccttaagagcaaacaaggcccgatcgatgttttcctgtgc
cctgaggagaccgtaggtgggatcagccctgggaagaccccatcccaggaggtcacttct
gaggaggagaacagggccactgactctgccaccatagtgtcaccaccaccatcatctccc
ccctcatccctcaccacagatcccagccagtctctactcagcctggagcaagaaccgctg
ttgtcccggatgggcagcctgcgggctcccgtggacgaggaccgcctgtccccgctggtg
gcggccgactcgctcctggagcatgtgcgggaggacttctccggcctcctccctgaggag
ttcatcagcctttccccaccccacgaggccctcgactaccacttcggcctcgaggagggc
gagggcatcagagacctcttcgactgtgactttggggacctcacccccctggatttctga

>gi568815578f:33506956_33744643|GENSCAN_predicted_peptide_7|212_aa
MAAPPQLRALLVVVNALLRKRRYHAALAVLKGFRNGAVYGAKIRAPHALVMTFLFRNGSL
QEKLWAILQATYIHSWNLARFVFTYKGLRALQSYIQGKTYPAHAFLAAFLGGILVFGENN
NINSQINMYLLSRVLFALSRLAVEKGYIPEPRWDPFPLLTAVVWGLVLWLFEYHRSTLQP
SLQSSMTYLYEDSNVWHDISDFLVYNKSRPSN

>gi568815578f:33506956_33744643|GENSCAN_predicted_CDS_7|639_bp
atggcagccccgccgcagctaagggctctgctcgtagtcgtcaacgcactgctgcgcaag
cgccgctaccacgctgcgttggccgtgcttaagggcttccggaacggggctgtctatgga
gccaaaatccgggcccctcacgcgctggtcatgacctttctcttccggaatggcagcctc
caggagaagctgtgggccatactgcaggccacatatatccactcctggaacctggcacgg
tttgtgttcacctacaagggtctccgtgccctgcagtcctacatacaaggcaagacctac
ccagcacacgcattcctggcggccttcctcgggggtatcctggtgtttggagaaaacaat
aacatcaacagccagatcaacatgtacctgttgtcacgcgtcctgtttgccctgagccgc
ctggctgtagagaagggctacatccctgaacccaggtgggacccgttcccgctgctcact
gcggtggtgtgggggctggtgctgtggctctttgagtatcaccgatccaccctgcagccc
tcgctgcagtcctccatgacctacctctatgaggacagcaatgtatggcacgacatctca
gacttcctcgtctataacaagagccgtccctccaattaa

>gi568815578f:33506956_33744643|GENSCAN_predicted_peptide_8|182_aa
LGMSCDRILTNGTTIELYRICNFLIKGKGKGMDRALWLMPAIPVHWQAEAGRCEGAAGGG
AARNSRLRRPRRRSPSRASKIACAILEPPPSPPQEPKPGYASIVGAVAVESGPPGGAQEP
PPSPQPWKPNLGSRDPSISGLPWLHSITQSPGHRVWTPPHLNDQVYTDLISAAHAELPIP
II

>gi568815578f:33506956_33744643|GENSCAN_predicted_CDS_8|549_bp
ctaggaatgtcatgtgacagaattctcaccaatgggacaacaatagaactgtaccgtatc
tgcaacttcctcataaaaggaaaaggaaagggcatggacagggcactgtggctcatgcct
gcaatcccagtacattggcaggctgaggccgggcgctgcgagggcgcggcgggagggggc
gcagcgcggaacagccgcctccgccggccccgccgccgctcaccctccagggcctcaaag
atcgcctgcgccatcttggagccgccgccgtcgccgccacaggaaccgaagcccggctac
gcgagcattgtgggagccgtggcggttgagtcggggccgccagggggcgcccaggagccg
ccgccgagcccccagccctggaaacccaacctaggctcgcgggaccccagcatctctggg
ctgccctggctccactcgataacccagtcaccgggccaccgagtgtggaccccgcctcac
ttgaacgaccaagtctacaccgaccttatatccgccgcacacgcggaacttcccatccct
attatctaa