GENSCAN 1.0	Date run:  3-Nov-116	Time: 04:22:52

Sequence gi568815578f:11818276_12023663 : 205388 bp : 40.03% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  10331  10454  124  1  1   98   95    69 0.549   7.84
 1.02 Intr +  23936  24022   87  0  0  100   38    55 0.555   0.72
 1.03 Term +  24111  24166   56  1  2  121   47    86 0.906   4.54
 1.04 PlyA +  24417  24422    6                               1.05

 2.03 PlyA -  24810  24805    6                               1.05
 2.02 Term -  28460  28373   88  1  1   97   47    69 0.411  -0.15
 2.01 Init -  29512  29253  260  1  2   84   92    84 0.837   5.06
 2.00 Prom -  31662  31623   40                              -4.95

 3.06 PlyA -  31803  31798    6                               1.05
 3.05 Term -  43079  43053   27  2  0   83   36    63 0.076  -2.30
 3.04 Intr -  52452  52370   83  1  2  108   82   113 0.603  11.14
 3.03 Intr -  53220  53132   89  2  2   28   68    18 0.218  -7.50
 3.02 Intr -  53883  53711  173  0  2   27   51   196 0.489   7.62
 3.01 Init -  56080  55976  105  1  0   83   92    72 0.451   7.37
 3.00 Prom -  59235  59196   40                              -3.55

 4.00 Prom +  63423  63462   40                              -4.05
 4.01 Init +  72493  72679  187  0  1   58  101   125 0.131   8.07
 4.02 Intr + 100059 100326  268  1  1   80  107   181 0.175  14.87
 4.03 Intr + 100811 101192  382  2  1   80   66   115 0.400   2.49
 4.04 Intr + 101443 101561  119  0  2   47   74   192 0.889  12.04
 4.05 Term + 104359 105391 1033  1  1   83   48  1191 0.997 105.20
 4.06 PlyA + 105756 105761    6                               1.05

 5.04 PlyA - 105907 105902    6                               1.05
 5.03 Term - 107133 106997  137  1  2   99   42   134 0.909   7.10
 5.02 Intr - 111888 111779  110  2  2   87   57    49 0.045   0.71
 5.01 Init - 120410 120289  122  2  2   21   77   119 0.359   3.81
 5.00 Prom - 120920 120881   40                              -3.45

 6.00 Prom + 121515 121554   40                              -6.75
 6.01 Init + 128214 128262   49  2  1   86   58    59 0.476   1.88
 6.02 Intr + 128371 128424   54  2  0   46   98    81 0.484   2.93
 6.03 Intr + 129180 129338  159  1  0   67   54    75 0.207   1.04
 6.04 Intr + 129576 129618   43  1  1   52   99    53 0.270  -0.82
 6.05 Intr + 134759 134903  145  2  1   27   78   112 0.343   3.46
 6.06 Intr + 140656 140792  137  0  2   13   78   113 0.185   1.25
 6.07 Intr + 140922 141009   88  0  1    2   85   191 0.352   9.25
 6.08 Intr + 145183 145230   48  0  0   86  110    11 0.210   1.06
 6.09 Term + 151528 151716  189  0  0   74   50   112 0.281   2.47
 6.10 PlyA + 152045 152050    6                              -0.45

 7.00 Prom + 153499 153538   40                              -5.25
 7.01 Init + 154826 154875   50  1  2   74   77    58 0.429   3.77
 7.02 Intr + 156766 156851   86  1  2  114   27    83 0.194   3.34
 7.03 Intr + 157429 157502   74  2  2   69   81    74 0.102   3.01
 7.04 Intr + 174747 174866  120  2  0   69   91    57 0.192   3.87
 7.05 Intr + 180050 180211  162  1  0   50   33   117 0.248   1.65
 7.06 Intr + 183215 183496  282  1  0   58  101   102 0.629   5.19
 7.07 Intr + 183938 184235  298  1  1   53   58   128 0.634   1.82
 7.08 Term + 194269 194420  152  2  2   65   49   117 0.065   2.59
 7.09 PlyA + 196153 196158    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578f:11818276_12023663|GENSCAN_predicted_peptide_1|88_aa
VRVAPVGADSPHASMLGPNSPGHTSKDENKWHEVDKNSCIIVATGRFYFQLPFISHVTDS
GQWNVARSDEEANGPEMAKPYHEKRLDL

>gi568815578f:11818276_12023663|GENSCAN_predicted_CDS_1|267_bp
gtaagggttgccccagtgggtgcagacagcccccatgcttccatgttaggcccaaacagt
cctgggcatacatcaaaagatgaaaacaagtggcatgaggttgataaaaacagctgtatc
atagttgccacaggaagattttatttccagctgcccttcatcagtcacgtgactgattct
ggccaatggaatgtggccagaagtgatgaagaagcaaatggccccgagatggcaaagcca
taccatgaaaagcgactggacctctga

>gi568815578f:11818276_12023663|GENSCAN_predicted_peptide_2|115_aa
MTSHAGYILKNNRWWNLELYSTQPGQHYVGFIGLHHYLHLTDKETKNQKDLKICPKIHWL
SVSEPGLNLDLSDCGGCALSTHSVEDRLAQTFSYGGSKVSRVRKQICVHLLEAKA

>gi568815578f:11818276_12023663|GENSCAN_predicted_CDS_2|348_bp
atgaccagccatgcaggttatatactgaagaacaaccgttggtggaatttggaattatac
agtacacaaccaggacagcattatgtggggttcataggtttgcatcattatcttcatctt
acagataaggaaaccaaaaatcagaaggatttaaaaatttgcccaaagatacattggctg
tcagtgtcagaaccaggattaaacctggatttgtctgattgtggaggctgtgctctatcc
actcactctgttgaagacaggttagcgcagactttcagttatggtggcagcaaagtttca
agggtgagaaagcagatatgtgtacatcttcttgaagctaaggcttga

>gi568815578f:11818276_12023663|GENSCAN_predicted_peptide_3|158_aa
MACGNASGRGGMFGRCSVKVEFMRIIGVMGNEVREEKKEKLKKEEKEKDEKKNKKRKEKE
EENEKEKKRRNSSSCRRRRKRRRRRRECAEAGGTMETSVETCVTPKQHINSGYVSIRSSL
WSGIPMLEAFLAYNNIQVDYYECLDLYGKQLTTDYRLN

>gi568815578f:11818276_12023663|GENSCAN_predicted_CDS_3|477_bp
atggcctgtggaaatgcctctgggagaggtggcatgtttggacgttgttcagtaaaggtg
gaatttatgaggatcataggtgtgatgggaaatgaagttagagaggagaagaaggagaag
ttgaagaaggaggagaaggagaaggatgagaagaaaaacaagaagaggaaggagaaggag
gaggaaaatgagaaggagaagaagagaaggaacagcagcagttgcaggaggaggagaaag
aggaggaggaggaggagggagtgtgcagaagctggggggactatggaaacgtctgtggaa
acctgtgtaacccctaaacagcacattaactcagggtatgtcagcattaggtcatctctt
tggtcagggattccaatgttggaagcatttttagcgtacaacaacatccaagtggattac
tatgaatgcctagacctctatggcaaacagttgacaacagattatcggctgaattag

>gi568815578f:11818276_12023663|GENSCAN_predicted_peptide_4|662_aa
MPLRSLPVTGHARSLPQSVPCVRVPAEPAGRWISECPGRGLRSGHRARRRTAASPEARRS
AGETVKNRSKKSSKKANTSSSSSNSSKLPPVCYEIITLKTKKKKMAADIFPRKKPANSSS
TSVQQYHQQNLSNNNLIPAPNWQGLYPTIRERNAMMFNNDLMADVHFVVGPPGGTQRLPG
HKVSNSCMTGLVLTFTKRDPFHKPVTWCGQLADVRQCMFHSIRERAHPLQRALATLNFFF
VSFYTALYLTHPLLTLQTWEVVVTGQESRMFTLLLEISYYVLAVGSSVFHAMFYGELAED
KDEIRIPDVEPAAFLAMLKYIYCDEIDLAADTVLATLYAAKKYIVPHLARACVNFLETSL
SAKNACVLLSQSCLFEEPDLTQRCWEVIDAQAELALKSEGFCDIDFQTLESILRRETLNA
KEIVVFEAALNWAEVECQRQDLALSIENKRKVLGKALYLIRIPTMALDDFANGAAQSGVL
TLNETNDIFLWYTAAKKPELQFVSKARKGLVPQRCHRFQSCAYRSNQWRYRGRCDSIQFA
VDKRVFIAGFGLYGSSCGSAEYSAKIELKRQGVVLGQNLSKYFSDGSSNTFPVWFEYPVQ
IEPDTFYTASVILDGNELSYFGQEGMTEVQCGKVTVQFQCSSDSTNGTGVQGGQIPELIF
YA

>gi568815578f:11818276_12023663|GENSCAN_predicted_CDS_4|1989_bp
atgccgctccgctccctcccggtgaccgggcacgcgcgctcgctcccgcagagcgtgccc
tgcgtgcgggtgcccgccgagcccgccgggcgctggatctccgagtgccccggccggggc
ctgaggagcgggcacagggcaaggcggcggacggctgcgtcgcccgaggcgaggaggagc
gctggcgagacggtaaagaacaggtccaagaaaagctcaaagaaagcaaataccagcagc
agcagtagcaacagcagcaagttgccaccagtttgttatgaaataattaccttgaagact
aaaaagaagaagatggctgctgatatattcccccgtaaaaagccagccaactccagcagc
accagcgtccagcagtaccaccagcagaatctcagtaacaacaaccttatcccggcccca
aactggcagggtctttatcccaccattagagagagaaatgcgatgatgttcaataatgat
ttgatggcagatgtacattttgtggttgggccaccaggtgggactcaacggttgccagga
cacaaagtaagcaacagctgcatgaccggtttagtcctgacgtttacaaagagggaccct
ttccataagcctgtaacttggtgtgggcagcttgccgatgtcaggcagtgcatgtttcac
tcgattagggagagagcgcaccctctccagagggctttggccacgcttaattttttcttt
gtttccttctatactgctttatatctcacacatcccctcttaactctccagacatgggaa
gttgttgtgacaggtcaggaaagtcgtatgtttacccttctcctagaaattagttattat
gttttagctgttgggagctctgtgttccatgcgatgttttacggagaacttgcagaggac
aaagatgaaatccgtataccagatgtcgaacctgctgcttttctcgctatgctgaaatat
atctattgtgatgaaattgacttggctgctgacacagtgctggccacactttatgctgcc
aaaaagtacattgtccctcaccttgccagagcctgtgttaatttcctggagaccagcctg
agtgccaagaatgcctgtgtgctcctctcccagagctgcctgttcgaggagccagacctg
acccagcgttgctgggaggtgattgatgcccaggctgagttagctctcaagtctgaggga
ttctgcgatattgacttccagacactagaaagtattctccgtagggaaactctgaatgcc
aaagaaattgtggtttttgaggcagctctcaactgggctgaagtagaatgccaacgacaa
gatctggcgttgagcattgaaaataaacgcaaggttctaggaaaggcactttacttgatc
cgcatacccacaatggccctcgatgattttgcaaatggtgctgcacagtccggggtatta
actctcaatgagaccaacgacatcttcctctggtatactgcagccaaaaagcctgagctt
cagtttgtgagtaaagcccgtaagggccttgtcccccagcgctgtcaccgtttccagtcg
tgtgcctatcgaagcaaccaatggcgctatcgtggtcgctgtgacagcatccagtttgca
gttgataaaagagtgttcattgctggctttgggctgtatggctccagctgtggttctgca
gaatacagtgccaagattgaacttaagcggcagggcgttgtcctggggcagaacttgagc
aagtacttctcagatgggtccagcaatacctttcccgtatggtttgaatacccagtgcag
atcgagccagacaccttctacacagccagtgtgatactggatggcaatgaactcagctac
tttggacaagaaggcatgacagaagttcagtgtggcaaagtgactgtccagtttcagtgc
tcctcagatagcaccaatggcactggggtacagggagggcagatccctgaacttatattc
tatgcttga

>gi568815578f:11818276_12023663|GENSCAN_predicted_peptide_5|122_aa
MSDGKRSQRYQIEKSEGEFIIPLPLCSIQALNRLDDAYPYWYYCQCFRNNVFHSHNDHFE
EVTIVTAIILEGTEAQRGKPAEGNKPTSTGEEVAQRHSEYVRAVTHGPCWGQQEDHYCPT
SY

>gi568815578f:11818276_12023663|GENSCAN_predicted_CDS_5|369_bp
atgtctgatggcaagagaagtcagaggtaccagatcgagaagagtgaaggagaattcatc
attcctctgcctttgtgttctattcaggccctcaatagattggatgatgcctatccatat
tggtactattgtcagtgctttagaaataatgtatttcatagtcataatgaccattttgag
gaagtcactattgttactgccatcattcttgagggaactgaggctcagagagggaagccg
gctgaaggcaacaagcccacatctacaggggaagaagtggcccagaggcacagtgaatac
gtcagggcagtcactcatgggccttgctggggccagcaggaggaccattactgtcccacc
tcttactag

>gi568815578f:11818276_12023663|GENSCAN_predicted_peptide_6|303_aa
MGFRHVGQAALKLLTSEYNWSINSSNKTKWYNAEEAVCLNIHQALSTVDESAPLISVTVN
GVALRYSFLTLSTLEEIYIVLLDNNNHGRGEPGLDEAVWALSLGLGVFVDQPQLLLNPRP
VKEGTLIASTHGLWEIPGHLVIPGCKDSWELQKPDSIFTLISRSINQASRMCELRRQRSS
SGGAGLRLPRFPFRRPNEYKEEDSEERDHGEDSDTYKDDDEDDELARPDGLEQVCLVVCN
QKSLLSESGPCFSSPYQLADLYSCYILLCHSPESSAKTPSGQLQAMGKSLGCVCSGITVS
MDT

>gi568815578f:11818276_12023663|GENSCAN_predicted_CDS_6|912_bp
atggggtttcgccatgttgggcaggctgctctcaaactcctgacctcagagtacaattgg
agcatcaacagcagcaataaaaccaaatggtacaacgctgaagaggctgtttgcttaaat
atacatcaagccctttctactgtggatgaatctgctccattaatatctgtcactgttaat
ggagttgctttgcgctactcctttctcactctgtccactcttgaggaaatttacattgtc
ctcttagataataataaccatggcagaggagagccaggactggatgaagcggtgtgggca
ctgagcttgggccttggagtctttgtagatcagcctcagttgcttcttaacccaagacct
gtaaaagaagggacactcatcgcttccactcatggtctgtgggagatacctggtcatttg
gtcatacctggatgcaaggacagctgggagctccagaagcctgacagtattttcacgttg
atctcccgttcgataaatcaagcctcgcggatgtgtgaactgcgacgccaacgcagtagc
tctggaggagcggggctgcggctgccgcgcttcccgtttcgcaggccaaatgagtacaag
gaagaagattcagaagaaagagaccatggagaagatagtgatacttataaagatgatgat
gaggatgatgagctggccagacctgatggtcttgagcaggtttgcttagtagtctgcaac
cagaagtcattgctgagtgaaagtggaccttgtttttcttcaccctaccaattggctgac
ttgtattcatgctacatattgctctgccattcaccagaaagttcggcgaaaacacctagt
ggtcaactacaggccatggggaaaagtctgggctgtgtctgctctgggatcacagtgagc
atggacacttag

>gi568815578f:11818276_12023663|GENSCAN_predicted_peptide_7|407_aa
MQHQIHTGGHGQGEDTRWTYARLLIERQQHNEAGASQNPYLNKGNDFSTGLLDCSHDKRL
LGFLQSKKSMVQTFYLFNLNLKNLIFSARAQRFCPGHGGPRRAGLGCQHQDRPRIALYYI
QMLTKLMTKARRDKPTKCLLTSLRGDHFWDADWGQLTTSRMLIKSKVNDAAGYYKAFYLD
LMSMPVKASSQRLTSQGCYNFDYFWMEALLSLFRCLSIMPRVSTAPEPSFHKTKEIACCG
FHRSLWSLFRFGHFEVNASGIVKGKNEKDFRTWRWGKEELSKNSKGLERQTPATTDTRLD
SCISSKPAVLYYGQPSTSIDTTWKLHRTAESQAAQDLQNQNLWGQLGSRNLCLNEPPAEA
CFLRYELTSISALFGGSREKAHRQGVGSCLQQVTVTGAPIPFGIMTF

>gi568815578f:11818276_12023663|GENSCAN_predicted_CDS_7|1224_bp
atgcaacaccaaattcatactggtggccatggtcaaggggaagacacaagatggacctat
gcaagacttctgattgaaagacagcagcataatgaagctggtgcttcacagaatccatat
ttgaataaagggaatgacttctctacaggtctgctcgactgttctcatgacaagcggctg
ctgggctttctgcagagcaagaagtccatggtacagacattttacctctttaatcttaat
ttaaaaaacctcatcttctctgcccgagcccaacgcttctgcccgggacatggaggacct
agacgtgcaggactgggctgtcagcaccaggatagaccaagaattgcactttactacatc
caaatgctgacgaaactgatgacaaaagctagaagagacaagcccaccaagtgccttctg
acctctctcaggggggaccacttctgggatgctgattggggtcagctgaccacttccagg
atgctgattaagtcaaaggtaaatgatgcagctggatattacaaagctttctaccttgac
ttgatgtctatgcctgttaaagcaagcagccagcgtctgacatctcagggttgttacaac
tttgattatttttggatggaggcactgctgtccttatttcggtgcctctcaattatgcct
cgtgtctcaactgctcctgaaccttcattccataaaacaaaagagattgcctgctgcggt
tttcataggtctttgtggagtctctttagatttgggcattttgaggtcaatgcgtcagga
attgttaagggcaagaatgagaaagatttcaggacttggaggtgggggaaagaggagcta
tcaaagaatagcaagggccttgaaagacaaaccccagctactactgacaccaggctggac
agctgcatatcctccaagccagcagtcctatactatggtcagcctagcaccagcattgac
actacctggaagcttcatagaactgcagaatctcaggctgctcaagatttgcagaatcag
aatctctgggggcagctggggtccagaaatctgtgtttgaatgagcccccagccgaagcc
tgcttcttgaggtatgaactcaccagcatttcagccctgtttggtgggagcagagagaaa
gcccacagacagggagttggcagctgcctgcagcaggtcaccgttactggggcaccaata
ccatttggtataatgaccttctag