GENSCAN 1.0	Date run:  8-Nov-116	Time: 10:17:33

Sequence gi568815576r:38766212_38972190 : 205979 bp : 50.03% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1944   2040   97  2  1  121   64   141 0.377  14.58
 1.02 Term +   3885   4141  257  1  2   21   53   163 0.418   1.85
 1.03 PlyA +   5390   5395    6                               1.05

 2.09 PlyA -   6240   6235    6                               1.05
 2.08 Term -  13402  13238  165  1  0  109   47   296 0.788  25.52
 2.07 Intr -  14331  14243   89  1  2   25   56    63 0.461  -3.51
 2.06 Intr -  14798  14669  130  2  1   87   26   207 0.619  14.67
 2.05 Intr -  16574  16452  123  2  0   48   98    81 0.512   5.88
 2.04 Intr -  18044  18013   32  0  2  130   93    -2 0.490   2.35
 2.03 Intr -  21915  21620  296  2  2   97   36    62 0.058  -1.45
 2.02 Intr -  27349  27290   60  0  0   75   59    75 0.146   1.15
 2.01 Init -  32271  32231   41  0  2   83   81    54 0.244   3.89
 2.00 Prom -  46981  46942   40                              -2.76

 3.19 PlyA -  47094  47089    6                               1.05
 3.18 Term -  56622  56398  225  0  0   78   55   189 0.657  11.38
 3.17 Intr -  57051  56872  180  0  0   47  110   221 0.855  20.26
 3.16 Intr -  60536  60289  248  0  2  100  102   474 0.998  47.18
 3.15 Intr -  62331  62076  256  0  1   84   76   315 0.736  26.92
 3.14 Intr -  77815  77024  792  1  0   41   83  1355 0.671 121.97
 3.13 Intr -  81915  81773  143  1  2   38   94    85 0.798   4.17
 3.12 Intr -  85625  85491  135  0  0   55   83    65 0.734   3.24
 3.11 Intr -  92573  92408  166  2  1   87   42    73 0.025   2.13
 3.10 Intr -  94547  94441  107  0  2   95   20    70 0.645   0.83
 3.09 Intr -  94688  94621   68  1  2   81   74    68 0.761   3.25
 3.08 Intr -  97466  97338  129  1  0   52   96    46 0.235   1.61
 3.07 Intr - 100990 100002  989  1  2  130   61  1250 0.289 116.17
 3.06 Intr - 105335 105269   67  1  1  113   86    55 0.999   6.71
 3.05 Intr - 105546 105481   66  2  0   82   87   116 0.997   8.92
 3.04 Intr - 105734 105691   44  2  2  135   89    35 0.753   5.34
 3.03 Intr - 106180 105911  270  1  0   34  105   199 0.501  13.94
 3.02 Intr - 118021 117912  110  2  2   46  100    76 0.534   4.60
 3.01 Init - 140948 140939   10  2  1  107   81     2 0.438   2.17
 3.00 Prom - 143161 143122   40                              -2.06

 4.00 Prom + 150264 150303   40                              -0.66
 4.01 Init + 151888 151941   54  0  0   82  113    58 0.782   6.99
 4.02 Intr + 156386 156510  125  1  2   51  100    23 0.207  -0.82
 4.03 Intr + 170526 170630  105  0  0  103   75    36 0.000   3.13
 4.04 Term + 180637 181057  421  1  1   31   47   201 0.000   5.06
 4.05 PlyA + 182966 182971    6                               1.05

 5.00 Prom + 185030 185069   40                              -3.76
 5.01 Init + 186598 186639   42  0  0   83  110    51 0.820   7.22
 5.02 Intr + 190922 191086  165  1  0   65   37    90 0.461   1.76
 5.03 Intr + 191152 191213   62  0  2   98   29    55 0.450  -1.87
 5.04 Intr + 193385 193534  150  2  0  -25   43   255 0.000   8.98
 5.05 Intr + 194018 194042   25  2  1   65   95   -29 0.286  -6.47
 5.06 Intr + 195176 195470  295  1  1  123   95   247 0.597  25.48
 5.07 Intr + 195887 196002  116  0  2  127   94    63 0.998  10.97
 5.08 Intr + 196217 196442  226  1  1  119   15    55 0.192  -1.14
 5.09 Intr + 200056 200108   53  2  2   94  111    33 0.238   4.83
 5.10 Intr + 205299 205394   96  2  0   47  115    46 0.046   3.41

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  68963  69020   58  1  1   86   77    90 0.828   7.25
S.002 Term -  92573  92322  252  2  0   87   54   111 0.888   3.24
S.003 Sngl + 180641 181057  417  1  0   49   47   209 0.865   9.21


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576r:38766212_38972190|GENSCAN_predicted_peptide_1|117_aa
GPCETGNTERQHGVSSEWEEEELKPAGLQVQRALGIEASTPLGSLALPAPGNSVVMLAES
AVKAPAGRELLLVAGMGRIWPFQGPAANTAFNKMDGEEGKRREPGTEKPAETLSWSP

>gi568815576r:38766212_38972190|GENSCAN_predicted_CDS_1|354_bp
gggccctgtgagaccggcaatactgagcggcaacatggggtgagctcggagtgggaagag
gaggagctgaagcccgcaggcctgcaggtgcagcgagccctgggcatcgaggcctccact
cctctgggctccctggcacttccggcccctgggaactcagtggtcatgttggccgagtct
gcagtcaaggcccctgcgggaagagagctgctgctggtggcagggatgggccgtatctgg
ccattccagggtccagcggcaaatacagcattcaacaaaatggatggagaggaagggaaa
agaagggagcccgggacagagaaaccggctgagaccctgtcctggagcccctga

>gi568815576r:38766212_38972190|GENSCAN_predicted_peptide_2|311_aa
MEGEKKLSDGGMRRMSLFFDPTLGFREDVLPNGRRPRKTGVPACVPNVAGSKRQAWTEAG
WVDAEYRSHLCYWLVSYLLVPKEKAQKVESEGWIGVPILVLPLPAVHPQATHKTSLSSSD
LSENRELDPSLTEPNSRGCCDDKSQHLLKAPLSSSGHSGRIMGETEGKKDEADYKRLQTF
PLVRHSDMPEEMRVETMELCVTACEKFSNNNEVLPAVQAAPRAFDGPCVGDTASRHQRRK
AIHQSGGESEKSVLRQPSAAKMIKETMDKKFGSSWHVVIGEGFGFEITHEVKNLLYLYFG
GTLAVCVWKCS

>gi568815576r:38766212_38972190|GENSCAN_predicted_CDS_2|936_bp
atggaaggagagaagaagttatcggacggaggaatgcggcggatgtcgttgttctttgac
ccaactttaggcttccgagaggatgtgctccccaatgggagaaggccaaggaagactgga
gtgcccgcctgtgtccccaatgtggcgggaagcaagaggcaggcctggacagaggctgga
tgggtggatgctgagtatcgaagtcatctgtgttactggcttgtctcctacttgcttgtg
ccaaaggagaaagcacagaaggtcgagtcagaaggatggattggggttccgatcctggtt
ctaccattgccggctgtgcaccctcaggccacccataaaacctctctgagctccagtgac
ttgtctgagaatagggagctggatccttccctcacagaaccgaactcccggggttgttgc
gatgacaagtcccagcacctcctgaaagccccactctcctccagtggtcacagtggaagg
atcatgggagaaacagaagggaagaaagatgaggctgattataagcgactgcagaccttc
cctctggtcaggcactcggacatgccagaggagatgcgcgtggagaccatggagctatgt
gtcacagcctgtgagaaattctccaacaacaacgaggtattgccagcagtgcaggcggcc
cctcgtgcttttgatggcccctgtgttggggatacggccagcaggcatcaacgcaggaag
gccattcatcaatctggtggggagagcgagaagtcagtgttgcggcagccgagcgccgcc
aagatgatcaaagagacaatggacaagaagttcggctcctcctggcacgtggtgatcggc
gagggctttgggtttgagatcacccacgaggtgaagaacctcctctacctgtacttcggg
ggcaccctggctgtgtgcgtctggaagtgctcctga

>gi568815576r:38766212_38972190|GENSCAN_predicted_peptide_3|1334_aa
MGEGTGTSQPISYQQAFDIVNPLKGPPQDPREGDEEEKAKQPPRGRGRSWQPRASREDHV
TARSWNASARPAALPPAGAWALRRVRERCRTGRGRREYYGLWVPLSKMELSAVGERVFAA
ESIIKRRIRKGRIEYLVKWKGWAIKYSTWEPEENILDSRLIAAFEQKERERELYGPKKRG
PKPKTFLLKARAQAEALRISDVHFSVKPSASASSPKLHSSAAVHRLKKDIRRCHRMSRRP
LPRPDPQGGSPGLRPPISPFSETVRIINRKVKPREPKRNRIILNLKVIDKGAGGGGAGQG
AGALARPKVPSRNRVIGKSKKFSESVLRTQIRHMKFGAFALYKPPPAPLVAPSPGKAEAS
APGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLLPETVSPSAPSWREPEVL
DLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAGASSEPEAGDWRPEMSPCSNVVVTDV
TSNLLTVTIKEFCNPEDFEKVAAGVAGAAGGGGSIGASKWSASAGLSSKWSSPGQPWCMK
RHQAHRLEVGSAHGGPSGWDRGCLAFHLQAPDDSRGHLFARPRTAWGPERFCFGSGSGLV
HQSPSWPAPAPCVFHTSAIGAAGFWEDRLQKGLVACRGRAQGHLIHSGGVTKEAAGGGPV
LASRHPHALSISQGSWSSAERYTSQALSCTLAFHSCINPPVVQPRKPERVAESFAPGDSI
RREATGTLEGLLLTVYGELDLGVRNGPWQPGRGPLSSPFNNNFATQQQSGGSSGRGDSSS
SGSGSGSGSGSRACPARPSAPGLRAPTPPPRLPGASGAPAARLTLKFLAVLLAAGMLAFL
GAVICIIASVPLAASPARALPGGADNASVASGAAASPGPQRSLSALHGAGGSAGPPALPG
APAASAHPLPPGPLFSRFLCTPLAAACPSGAQQGDAAGAAPGEREELLLLQSTAEQLRQT
ALQQEARIRADQDTIRELTGKLGRCESGLPRGLQGAGPRRDTMADGPWDSPALILELEDA
VRALRDRIDRLELISVSLPCEQQELPARVNLSAAPAPVSAVPTGLHSKMDQLEGQLLAQV
LALEKERVALSHSSRRQRQEVEKELDVLQGRVAELEHGSSAYSPPDAFKISIPIRNNYMY
ARVRKALPELYAFTACMWLRSRSSGTGQGTPFSYSVPGQANEIVLLEAGHEPMELLINDK
VAQLPLSLKDNGWHHICIAWTTRDGLWSAYQDGELQGSGENLAAWHPIKPHGILILGQEQ
DTLGGRFDATQAFVGDIAQFNLWDHALTPAQVLGIANCTAPLLGNVLPWEDKLVEAFGGA
TKAAFDVCKGRAKA

>gi568815576r:38766212_38972190|GENSCAN_predicted_CDS_3|4005_bp
atgggggaaggaacaggaacctcacagccgatctcctatcagcaagcttttgatattgtc
aatccccttaaggggccccctcaagaccccagggaaggggatgaggaggaaaaggcaaag
caaccgccccgggggagggggaggtcctggcaaccgcgcgccagccgcgaggatcacgtg
acggcccgcagctggaacgcgagcgcgcgccccgccgcgctcccgcccgccggggcctgg
gcgctgcggcgcgtgcgcgagcggtgccgcaccggccgcgggcgcagggagtattatggg
ctgtgggtgccgctgagcaagatggagctgtctgcagtgggcgagcgggtcttcgcggcc
gaatccatcatcaaacggcggatccgaaagggacgcatcgagtacctggtgaaatggaag
gggtgggcgatcaagtacagcacttgggagcccgaggagaacatcctggactcgcggctc
attgcagccttcgaacaaaaggagagggagcgtgagctgtatgggcccaagaagagggga
cccaaacccaaaactttcctcctgaaggcgcgggcccaggccgaggccctccgcatcagt
gatgtgcatttctctgtcaagccgagcgccagtgcctcctcgcccaagctgcactccagc
gcagccgtgcaccggctcaagaaggacatccgccgctgccaccgtatgtcccgccgtccc
ctgccccgcccggacccgcaggggggcagccccggactgcgcccgcccatttcgcccttc
tcggagacggtgcgcatcatcaaccgcaaggtgaagccgcgggagcccaagcggaaccgc
atcatcctgaacctgaaggtgatcgacaagggcgctggcggcgggggcgccgggcagggg
gccggggcgctggcccgccccaaagtcccctcgcggaaccgcgttataggcaagagcaag
aagttcagcgagagcgtcctgcgtacacagatccgccacatgaagttcggcgcctttgcg
ctgtacaagcctccgcccgcccccctggtagccccgtcccccggcaaggctgaggcctca
gccccgggccctgggctacttctggccgcccccgccgccccctacgacgcccgcagctct
ggctcctccggctgcccctcgcctacaccacagtcctctgaccccgacgacacgcccccc
aagctcctccccgagaccgtgagcccatccgcccccagctggcgcgagccggaggtgctc
gacctgtccctccctcccgagtcggcagccaccagcaagcgggcaccgcctgaggtcaca
gctgctgccggcccggcacctcccacggcccctgagcccgccggtgcctcctccgagccc
gaggctggggactggcgccccgagatgtcaccctgctccaatgtggtcgtcaccgatgtc
accagcaacctcctgacggtcacaatcaaggaattctgcaaccctgaggatttcgagaag
gtggctgctggggtagcaggcgccgctgggggcggtggcagcattggggcgagcaagtgg
tctgcttctgctggcctgagctccaagtggagcagcccgggccagccttggtgcatgaag
aggcaccaggcacaccgccttgaggtgggcagtgcccatgggggcccgagtggatgggac
cgagggtgcctggcgttccacctgcaagctcccgatgactcccgtggccacctgtttgcc
aggcctcggacagcctggggtcctgagcgcttctgctttggcagcggctctggcctggtc
caccagtctccatcctggcctgcacctgccccctgtgtcttccacaccagtgccataggg
gctgctggcttctgggaggacagacttcaaaaaggcctggtggcctgcagaggccgagca
caaggacacctgatccacagcggtggggtcacaaaggaagcagcagggggaggccccgtc
ctggcctccagacatccacacgcgctgagcatcagccagggaagctggagctctgctgag
cgctacacgagccaggctctgagctgcacactcgcatttcactcttgcataaatcctccc
gtggtgcagccaaggaagccggagagagtggctgagtcatttgctccaggtgactctatt
agaagagaggccacgggcaccttggagggactactcctgaccgtgtatggagaactggac
cttggtgtaaggaatggaccatggcagccagggaggggcccccttagctctccattcaac
aacaactttgccactcagcagcagagcggcggcagcagcggccgcggcgacagctccagc
tccggctccggctccggctccggctccggctcccgcgcctgccccgctcggcccagcgcg
cccgggctccgcgccccgaccccgccgccgcgcctgccgggggcctcgggcgcccccgcc
gcccgcctcacgctgaagttcctggccgtgctgctggccgcgggcatgctggcgttcctc
ggtgccgtcatctgcatcatcgccagcgtgcccctggcggccagcccggcgcgggcgctg
cccggcggcgccgacaatgcttcggtcgcctcgggcgccgccgcgtccccgggcccgcag
cggagcctgagcgcgctgcacggcgcgggcggttcagccgggccccccgcgctgcccggg
gcacccgcggccagcgcgcacccgctgccgcccgggcccctgttcagccgcttcctgtgc
acgccgctggctgctgcctgcccgtcgggggcccagcagggggacgcggcgggcgctgcg
ccgggcgagcgcgaagagctgctgctgctgcagagcacggccgagcagctgcgccagacg
gcgctgcagcaggaggcgcgcatccgcgccgaccaggacaccatccgtgagctcaccggc
aagctgggccgctgcgagagcggcctgccgcgcggcctccagggcgccgggccccgccgc
gacaccatggccgacgggccctgggactcgcctgcgctcattctggagctggaggacgcc
gtgcgcgccctgcgggaccgcatcgaccgcctggagttgatttctgtttctctgccctgt
gaacagcaggagcttccagcccgtgtgaacctctcagctgccccagccccagtctctgct
gtgcccaccggcctacactccaagatggaccagctggaggggcagctgctggcccaggtg
ctggcactggagaaggagcgtgtggccctcagccacagcagccgccggcagaggcaggaa
gtggaaaaggagttggacgtcctgcagggtcgtgtggctgagctggagcacgggtcctca
gcctacagtcctccagatgccttcaagatcagcatccccatccgtaacaactacatgtac
gcccgcgtgcggaaggctctgcccgagctctacgcattcaccgcctgcatgtggctgcgg
tccaggtccagcggcaccggccagggcacccccttctcctactcagtgcccgggcaggcc
aacgagattgtactgctagaggcgggccatgagcccatggagctgctgatcaacgacaag
gtggcccagctgcccctgagcctgaaggacaatggctggcaccacatctgcatcgcctgg
accacaagggatggcctatggtctgcctaccaggacggggagctgcagggctccggtgag
aacctggctgcctggcaccccatcaagcctcatgggatccttatcttgggccaggagcag
gataccctgggtggccggtttgatgccacccaggcctttgtcggtgacattgcccagttt
aacctgtgggaccacgccctgacaccagcccaggtcctgggcattgccaactgcactgcg
ccactgctgggcaacgtccttccctgggaagacaagttggtggaggcctttgggggtgca
acaaaggctgccttcgatgtctgcaaggggagggccaaggcatga

>gi568815576r:38766212_38972190|GENSCAN_predicted_peptide_4|234_aa
MGWVWWLMAVIPALLEAKASWLVQEWMPDAGCTNQILSSGDLESRTSGYHRLALAVRPGR
KLSLASGAAYICRQRTLLPHGWACRFCGLVTLTCTEMRALGTTGTEPPGPGESKEGFLEE
EWQSGPLLLQQECPQLLLGKGLCWLGLPLGQSGWLLPLPSEGSSGESCHARTPFPIIPNP
LHWFLPADVKIKSWPDFPLSFRFYPCALRPPRSPLRLLICDLEEIARVLGGMPA

>gi568815576r:38766212_38972190|GENSCAN_predicted_CDS_4|705_bp
atgggctgggtgtggtggctcatggctgtaatcccagcccttttggaggccaaggcttcc
tggttggtccaggagtggatgcctgatgcaggctgcacaaatcagattctctcttctgga
gatttagaatcgagaaccagtggttatcataggttagccttggctgtcagacctggaagg
aagctctctttggcctctggagctgcgtatatctgtagacagcggaccctgctgccacat
ggctgggcctgccgcttctgtggcttggtcacactcacatgcacggaaatgagagcactg
gggactactggaacagaaccgcctggcccgggagaatccaaggaaggcttcctggaggag
gaatggcagagcggacctctgctactgcagcaggaatgcccccagctgctgctggggaag
ggcttatgttggctgggtttgcctttggggcagagtggctggctgctccccctgcccagc
gagggtagttctggggagagttgccacgctcggaccccatttcccatcatccccaaccct
ttgcattggttcttgccagcagatgtgaagataaaaagctggccagacttcccactctcc
ttccgcttctatccctgtgcgctgaggcctccgaggagccctctgaggcttctgatttgc
gacctggaggaaattgcccgtgtgctcggaggaatgcctgcatga

>gi568815576r:38766212_38972190|GENSCAN_predicted_peptide_5|410_aa
MESSLDKRHTVERQPGKKMQDPNREHRMQQVPGSLDQAHPALATGEDTGVAVLEPALWTA
ECYSGSFSRGAKCGQLYIPIVTPQCLVVQWHKTYLCYEVERLDNGTSVKMDQHRGFLHNQ
VTDPAIRIRAGPFQSRDIHSTASVWRDQAKNLLCGFYGRHAELRFLDLVPSLQLDPAQIY
RVTWFISWSPCFSWGCAGEVRAFLQENTHVRLRIFAARIYDYDPLYKEALQMLRDAGAQV
SIMTYDEFKHCWDTFVDHQGCPFQPWDGLDEHSQALSGRLRAILQATSLCPLSTLSPPAP
FNPPALPESGKLKDGPQSLRKAETWVEQQNKRSSSKKCKQTVHHHLQLLTDASKAVCSRS
KSSVRAVVATGDPGTFAPLELPHRMASGFQNTKSGQDSAYITLANALLAK

>gi568815576r:38766212_38972190|GENSCAN_predicted_CDS_5|1230_bp
atggaatcttccctggacaagcgacataccgtggagagacagccagggaagaagatgcag
gaccctaacagagagcacaggatgcagcaggtgccagggagcctggaccaggcacatcct
gcactggccacaggggaggacacaggggtggctgtcctggagcctgctctctggaccgct
gagtgttattcagggtctttctccaggggagcaaagtgtggccagctctacatccccatt
gtcactccacagtgtctggtggttcagtggcataagacctacctgtgctacgaagtggag
cgcctggacaatggcacctcggtcaagatggaccagcacaggggctttctacacaaccag
gtgaccgacccagccatccgaatccgggcagggcccttccaatccagggacattcatagc
acagcctctgtctggagagaccaggctaagaatcttctctgtggcttttacggccgccat
gcggagctgcgcttcttggacctggttccttctttgcagttggacccggcccagatctac
agggtcacttggttcatctcctggagcccctgcttctcctggggctgtgccggggaagtg
cgtgcgttccttcaggagaacacacacgtgagactgcgtatcttcgctgcccgcatctat
gattacgaccccctatataaggaggcactgcaaatgctgcgggatgctggggcccaagtc
tccatcatgacctacgatgaatttaagcactgctgggacacctttgtggaccaccaggga
tgtcccttccagccctgggatggactagatgagcacagccaagccctgagtgggaggctg
cgggccattctccaggccacctccctgtgccctctttccactctctcacctcctgctcca
ttcaacccccctgctcttccagaatcagggaaactgaaggatgggcctcagtctctaagg
aaggcagagacctgggttgagcagcagaataaaagatcttcttccaagaaatgcaaacag
accgttcaccaccatctccagctgctcacagacgccagcaaagcagtatgctcccgatca
aaaagctcagtgagggctgtcgtggccactggcgacccaggcacatttgctccgcttgag
ctccctcaccgaatggcatctgggttccaaaataccaagtctggtcaagactctgcctac
atcacacttgctaatgccctgttggccaag