GENSCAN 1.0	Date run:  3-Nov-116	Time: 05:06:38

Sequence gi568815576f:35556426_35759532 : 203107 bp : 46.46% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   7552   7591   40                              -0.66
 1.01 Init +  32429  32519   91  1  1   92  113    63 0.816   9.85
 1.02 Term +  37534  37610   77  2  2   46   44   108 0.537   0.20
 1.03 PlyA +  38883  38888    6                               1.05

 2.10 PlyA -  40774  40769    6                               1.05
 2.09 Term -  51018  50872  147  0  0  108   47   275 0.998  23.30
 2.08 Intr -  54681  54459  223  2  1  110   75   322 0.644  31.23
 2.07 Intr -  60840  60738  103  1  1  100   98   115 0.402  12.93
 2.06 Intr -  66108  66010   99  1  0   94   68    23 0.143   0.98
 2.05 Intr -  71234  71151   84  0  0   60   28   118 0.074   2.79
 2.04 Intr -  78656  78530  127  2  1   92   68    27 0.322   1.35
 2.03 Intr -  86882  86777  106  1  1  110   63    16 0.013   1.52
 2.02 Intr -  91832  91784   49  0  1   87   77    28 0.043  -0.66
 2.01 Init -  95333  95201  133  2  1   78   47    69 0.359   2.10
 2.00 Prom -  95457  95418   40                              -0.26

 3.02 PlyA -  95741  95736    6                              -0.45
 3.01 Sngl -  96906  95968  939  0  0   58   43   327 0.504  21.71
 3.00 Prom -  98124  98085   40                              -5.16

 4.00 Prom +  99037  99076   40                              -3.66
 4.01 Init +  99364  99515  152  0  2   69  106    16 0.892   1.02
 4.02 Intr + 102190 103024  835  1  1   76   59   749 0.961  62.20
 4.03 Term + 135605 135775  171  1  0   86   34   107 0.182   2.93
 4.04 PlyA + 135789 135794    6                               1.05

 5.00 Prom + 137341 137380   40                              -4.76
 5.01 Init + 138827 138887   61  1  1   71   85    32 0.875   2.55
 5.02 Intr + 140022 140189  168  1  0   92   97    77 0.926   8.92
 5.03 Intr + 141291 141464  174  1  0   84   93    76 0.865   7.61
 5.04 Term + 141535 141746  212  2  2  -14   49   191 0.577   2.46
 5.05 PlyA + 142231 142236    6                               1.05

 6.05 PlyA - 142381 142376    6                              -1.75
 6.04 Term - 143166 143092   75  0  0   56   48    85 0.631  -0.86
 6.03 Intr - 145835 145710  126  2  0   44   84   159 0.991  11.98
 6.02 Intr - 147551 147384  168  2  0   83   88   134 0.957  13.04
 6.01 Init - 150886 150884    3  1  0   61  115     0 0.413  -0.00
 6.00 Prom - 151131 151092   40                              -4.26

 7.00 Prom + 154961 155000   40                              -3.56
 7.01 Init + 161447 161501   55  1  1   51  119    49 0.481   5.75
 7.02 Intr + 169786 170769  984  2  0    8   97   737 0.154  57.47
 7.03 Intr + 178306 178828  523  2  1  135  -14   294 0.809  15.91
 7.04 Intr + 180274 180462  189  1  0   36   44   180 0.559   7.10
 7.05 Term + 186440 186545  106  2  1   67   41   116 0.441   2.68
 7.06 PlyA + 186914 186919    6                               1.05

 8.04 PlyA - 187058 187053    6                               1.05
 8.03 Term - 187824 187770   55  2  1   71   53    62 0.217  -1.97
 8.02 Intr - 189570 189498   73  1  1   95  103    -1 0.579   0.56
 8.01 Init - 190114 190030   85  1  1   55   77   133 0.323   7.91

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 111492 111664  173  1  2   74   44   126 0.815   4.79


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576f:35556426_35759532|GENSCAN_predicted_peptide_1|55_aa
MGKVRVNPEDKGGHSVGVQSQGAGEGCQKQASSLGKTNLSYVTTKGSRNSGIQTL

>gi568815576f:35556426_35759532|GENSCAN_predicted_CDS_1|168_bp
atgggcaaggtgagggtgaatcctgaagacaaaggtggccactcggtgggtgttcagagc
cagggagcaggtgaaggttgtcagaaacaagcttcctcacttggaaaaacaaatctgagc
tacgtgaccaccaagggctcccggaactctggcattcagaccctgtga

>gi568815576f:35556426_35759532|GENSCAN_predicted_peptide_2|356_aa
MEYYAAIKKDEFVSFVGTWMKLETIILSKLSQGQKTKHRMFSLLGWTYMGYENSSCGLEL
WWAFSITERREFQVYYNSCPSSSWIGDARAFSPPDPTGLYPIYSQDTQTFRLWLNYNTDF
PGSPACKWQAMELLSPQSPFRVDRGEHLPFLVKGARYTLVPAGQEGALAAWLEALRGQLG
RRGAVVSMMDAEGLERSSPDCAMGLSDGEWQLVLNVWGKVEADIPGHGQEVLIRLFKGHP
ETLEKFDKFKHLKSEDEMKASEDLKKHGATVLTALGGILKKKGHHEAEIKPLAQSHATKH
KIPVKYLEFISECIIQVLQSKHPGDFGADAQGAMNKALELFRKDMASNYKELGFQG

>gi568815576f:35556426_35759532|GENSCAN_predicted_CDS_2|1071_bp
atggaatactatgcagccataaaaaaggatgagttcgtgtcctttgtagggacatggatg
aagctggaaaccatcattctcagcaaactatcgcaaggacaaaaaaccaaacaccgcatg
ttctcactcctaggatggacctatatggggtatgaaaatagctcctgtggcttagagcta
tggtgggctttttccataacagaaagaagagaatttcaagtctattacaattcatgtcct
tctagttcctggattggagatgcaagagcattttccccaccagatccaactgggctttac
cccatctactcccaggatactcagaccttcagactctggctgaattataacactgacttt
cctgggtctccagcttgcaaatggcaggctatggaacttctcagcccacaatcacccttc
agggtagaccgaggagagcacctccccttcctggtgaagggagcccgatacacgctggtg
ccggctggccaagaaggagccctggccgcttggctggaggctctgcgaggacagctgggg
agaaggggagctgtggtcagtatgatggatgctgaggggctggagaggagcagccctgac
tgcgccatggggctcagcgacggggaatggcagttggtgctgaacgtctgggggaaggtg
gaggctgacatcccaggccatgggcaggaagtcctcatcaggctctttaagggtcaccca
gagactctggagaagtttgacaagttcaagcacctgaagtcagaggacgagatgaaggcg
tctgaggacttaaagaagcatggtgccaccgtgctcaccgccctgggtggcatccttaag
aagaaggggcatcatgaggcagagattaagcccctggcacagtcgcatgccaccaagcac
aagatccccgtgaagtacctggagttcatctcggaatgcatcatccaggttctgcagagc
aagcatcccggggactttggtgctgatgcccagggggccatgaacaaggccctggagctg
ttccggaaggacatggcctccaactacaaggagctgggcttccagggctag

>gi568815576f:35556426_35759532|GENSCAN_predicted_peptide_3|312_aa
MIVYLENPIVSAQNLLKLIGNFSKVSGYKINVQKSQAFLHTNNRQTESQIMSELPFTIAS
KRIKYLGIQLTRDVKDFFKENYKPLLNETKEDTNKWKNIPCSWVGRINIMKMAILPKVIY
RFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGDITLPDFKLYYKATV
TKTAWYWYQNRDIDQWNRTEPSEIMPHIYNYLIFDKPDKNKKWGNDSLFNKWCWENWLAT
RRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGNIIQDIGMGKDFMSKTPKATA
TKAKIDKGISLN

>gi568815576f:35556426_35759532|GENSCAN_predicted_CDS_3|939_bp
atgattgtatatctagaaaaccccattgtctcagcccaaaatctccttaagctgataggc
aacttcagcaaagtctcgggatacaaaatcaatgtgcaaaaatcacaagcattcttacac
accaataacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttca
aagagaataaaatacctaggaatccaacttacaagggatgtgaaggacttcttcaaggag
aactacaaaccactgctcaatgaaacaaaagaggatacaaacaaatggaagaacattcca
tgctcatgggtaggaagaatcaatatcatgaaaatggccatactgcccaaggtaatttat
agattcaatgccatccccatcaagctaccaatgactttcttcacagaattggaaaaaact
actttaaagttcatatggaaccaaaaaagagcccacattgccaagtcaatcctaagccaa
aagaacaaagctggagacatcacgctacctgacttcaaactatactacaaggctacagta
accaaaacagcatggtactggtaccaaaacagagatatagaccaatggaacagaacagag
ccctcagaaataatgccgcatatctacaactatctgatctttgacaaacctgacaaaaac
aagaaatggggaaatgattccctgtttaataaatggtgctgggaaaactggctagccaca
cgcagaaagctgaaactggatcccttccttacaccttatacaaaaattaattcaagatgg
attaaagacttaaatgttagacctaaaaccataaaaaccctagaagaaaacctaggcaat
atcattcaggacataggcatgggcaaggacttcatgtctaaaacaccaaaagcaacggca
acaaaagccaaaattgacaaagggatctcattaaactaa

>gi568815576f:35556426_35759532|GENSCAN_predicted_peptide_4|385_aa
MGEIQGLNNSQRGSFEFQLQYISNNEQYIFREVARQWKRVLSLQQEQLVGKDEDDAPLCE
DVELQDGDLSPEEKIFLREFPRLKEDLKGNIDKLRALADDIDKTHKKFTKANMVATSTAV
ISGVMSLLGLALAPATGGGSLLLSTAGQGLATAAGVTSIVSGTLERSKNKEAQARAEDIL
PTYDQEDREDEEEKADYVTAAGKIIYNLRNTLKYAKKNVRAFWKLRANPRLANATKRLLT
TGQVSSRSRVQVQKAFAGTTLAMTKNARVLGGVMSAFSLGYDLATLSKEWKHLKEGARTK
FAEELRAKALELERKLTELTQLYKSLQQKDIRNKMTEGMYTHCDIFNNVILYPLAIRKNI
IERCTLSVISGVISSPDIRKSYINY

>gi568815576f:35556426_35759532|GENSCAN_predicted_CDS_4|1158_bp
atgggagagatccagggattaaataattctcaaagaggtagctttgaattccagcttcaa
tacatctccaacaatgaacagtacatttttagagaagtagcaagacaatggaaaagggtt
ttgagtctccagcaggagcaacttgtgggaaaggatgaggatgacgctcctctgtgtgaa
gacgtggagctacaagacggagatctgtcccccgaagaaaaaatatttttgagagaattt
cccagattgaaagaagatctgaaagggaacattgacaagctccgtgccctcgcagacgat
attgacaaaacccacaagaaattcaccaaggctaacatggtggccacctctactgctgtc
atctctggagtgatgagcctcctgggtttagcccttgccccagcaacaggaggaggaagc
ctgctgctctccaccgctggtcaaggtttggcaacagcagctggggtcaccagcatcgtg
agtggtacgttggaacgctccaaaaataaagaagcccaagcacgggcggaagacatactg
cccacctacgaccaagaggacagggaggatgaggaagagaaggcagactatgtcacagct
gctggaaagattatctataatcttagaaacaccttgaagtatgccaagaaaaacgtccgt
gcattttggaaactcagagccaacccacgcttggccaatgctaccaagcgtcttctgacc
actggccaagtctcctcccggagccgcgtgcaggtgcaaaaggcctttgcgggaacaaca
ctggcgatgaccaaaaatgctcgcgtgctgggaggtgtgatgtccgccttctcccttggc
tatgacttggccactctctcaaaggaatggaagcacctgaaggaaggagcaaggacaaag
tttgcggaagagttgagagccaaggccttggagctggagaggaaactcacagaactcacc
cagctctacaagagcttgcagcagaaagatattaggaacaagatgaccgaagggatgtac
acccactgcgatattttcaataatgtcatcctctaccccctggctattaggaagaacatc
atagagcggtgtacactttctgtgatatcgggagtaatatcctctccagatatcaggaaa
agttatattaattattaa

>gi568815576f:35556426_35759532|GENSCAN_predicted_peptide_5|204_aa
MGVLRARGGEGLAVTPRIAGGGVRLPVILFLISRDGEHDISFHIAVGVHSPGDTDPNIQQ
VEYDMTANIAMNVQPPDIRNYVTGDCTLLAILGVISSSPIMDIKKNITREVYTPCDMESN
SMLSLWDIRNNITEGGCTPPAILGVISFSPPRDIRNNITVGVYTPCDIATSIIVSLPAYK
EQYHKGVYTPCDIGDNIFLSPAGY

>gi568815576f:35556426_35759532|GENSCAN_predicted_CDS_5|615_bp
atgggggtcctaagagcaagggggggagaggggctggctgttactccccgcatcgcagga
gggggtgtacgcctacctgtgatattgttcctaatatccagggacggagagcatgatatt
agttttcatatcgcagtaggtgtacactcacccggtgacaccgatcctaatatccagcag
gtagagtatgacatgactgccaacatagcaatgaatgtacagccacccgatattaggaac
tatgtcacaggagactgtacacttcttgcgatattgggagtaatatcatcctctcccatc
atggatattaagaagaatattacaagggaggtgtacaccccctgcgatatggagagtaat
agtatgctctccctttgggatattaggaacaatatcacagaaggaggatgtacaccccct
gcgatattgggagtaatatcattttctccccctcgggatattcggaacaatatcacagtg
ggtgtgtacaccccctgcgatattgccactagtatcatcgtctccctgccagcatataag
gaacagtatcacaagggggtgtacaccccctgcgatattggggataatatcttcctctcc
cccgctggctattag

>gi568815576f:35556426_35759532|GENSCAN_predicted_peptide_6|123_aa
MVEGNELLLMTVGQWTIGAQLLYEMAVPGTPVSRHSAVEGPVGAATQGSEDGEGESTWVY
TAPNPGVVFLISKWEEDDIADNIEGGVHLFCDMVPDIQGEQYHTGLYTFCDIGSDINLSA
FGY

>gi568815576f:35556426_35759532|GENSCAN_predicted_CDS_6|372_bp
atggttgaggggaacgagttgctcttaatgactgttgggcagtggaccataggagcccaa
ctgctctatgaaatggctgttcctgggacacctgtgagcagacacagtgccgtggaaggg
ccagttggtgcagccacccagggctcagaggatggtgaaggtgaatccacgtgggtgtac
accgcccccaaccccggggtagtgttcctaatatccaagtgggaagaggatgacattgct
gacaatatcgaagggggtgtacacctcttctgtgatatggttcctgatatccagggggaa
cagtatcacacggggctgtacactttctgcgatattgggagtgatatcaacctctcggcc
tttggatattaa

>gi568815576f:35556426_35759532|GENSCAN_predicted_peptide_7|618_aa
MPCGKQGNLQVPGSKVLPASLVNLCQSWKINNLMSTVHSDEAGMLSYFLFEELMRCDKDS
MPDGNLSEEEKLFLSYFPLHKFELEQNIKELNTLADQVDTTHELLTKTSLVASSSGAVSG
VMNILGLALAPVTAGGSLMLSATGTGLGAAAAITNIVTNVLENRSNSAARDKASRLGPLT
TSHEAFGGINWSEIEAAGFCVNKCVKAIQGIKDLHAYQMAKSNSGFMAMVKNFVAKRHIP
FWTARGVQRAFEGTTLAMTNGAWVMGAAGAGFLLMKDMSSFLQSWKHLEDGARTETAEEL
RALAKKLEQELDRLTQHHRHLPQKASQTCSSSRGRAVRGSRVVKPEDQFSLHYSSAYPWI
QAQKTFHLCETVQDPRIQAQKTCHLCETVQDPWIQAQKTFHLCETVQDPRIQAQKTCHLC
ETVQDPWIQAQKTFHLCETVQDPRIQAQKAFHLCETVRDPRIQAQKAFHLSETVRDPRIQ
AQKAFHLSETVRDPRIQAQKAFHLCETVRDPRIQAQKAFHLTERQTPNKLPGEHIVQGLV
DQNKDLELATGWEAKEVCTKARHNPIEQAVERTNFGDGELSEKSVNVYKVVRVLSGVFLE
DSEKLSGIATGSRLWIEK

>gi568815576f:35556426_35759532|GENSCAN_predicted_CDS_7|1857_bp
atgccatgtggcaaacaaggaaatttgcaagttcccggttccaaggtgttacctgcctca
ctcgtgaacctgtgccagagttggaaaattaacaatttgatgtcaactgtccacagtgat
gaggctggtatgctgtcctactttctgtttgaagagctgatgcgatgtgacaaagattcc
atgccagatggaaatctgtcagaggaggaaaaattgtttctctcatattttcctttgcac
aagtttgagctagaacagaacatcaaagaacttaacacccttgcggaccaagttgacacc
actcacgagttgcttaccaagaccagcctggtggccagctcttccggggctgtttctggg
gtcatgaacatcctgggtttggccctagcacctgtgacagcaggaggcagtctcatgctc
tcagcaactgggacagggttgggggcagcagctgccatcaccaacatagtaacaaatgtc
ttagaaaatagaagcaattcagcagcaagagacaaagccagccgactggggcctctgaca
acatcacatgaggctttcggaggaataaattggtctgaaatcgaggctgctggcttttgt
gttaataagtgtgtaaaagctatccagggcatcaaggatcttcatgcctaccagatggcc
aaatccaactctggcttcatggctatggtcaagaattttgtggccaagagacacatccct
ttctggacggctagaggggtgcagagagcctttgagggcacaactctggccatgaccaat
ggtgcctgggtgatgggtgctgctggggctggcttcttacttatgaaagacatgagcagc
ttcctgcagagctggaagcacctggaggatggggcaaggacggagacagcagaggaactg
agagcacttgctaagaagctggagcaggagctggaccggctcacccagcaccaccggcac
ctgccgcagaaggcgagccagacctgttccagctcccggggcagggctgttcgaggatcc
cgtgtggttaaaccagaagaccagttctctctgcactactcatcggcttacccgtggatc
caggctcagaaaacattccacctgtgtgaaactgtgcaagacccacggatccaggctcag
aaaacttgccacctgtgtgaaactgtgcaagacccgtggatccaggctcagaaaacattc
cacctgtgtgaaactgtgcaagacccacggatccaggctcagaaaacttgccacctgtgt
gaaactgtgcaagacccgtggatccaggctcagaaaacattccacctgtgtgaaactgtg
caagacccacggatccaggctcagaaagcattccacctgtgtgaaactgtgcgagaccca
cggatccaggctcagaaagcattccacctgtctgaaactgtgcgagacccacggatccag
gctcagaaagcattccacctgtctgaaactgtgcgagacccgcggatccaggctcagaaa
gcattccacctgtgtgaaactgtgcgagacccgcggatccaggctcagaaagcattccac
cttacagaaagacagacaccaaataaactaccaggggagcacattgtacagggccttgta
gaccaaaataaggacttggaactggctacgggatgggaagccaaagaagtttgcacaaaa
gcacgtcacaatccgattgaacaggctgtcgagagaacaaacttcggcgatggagagctg
tcggagaaaagtgttaatgtgtacaaagtggtccgggtgctcagcggggtgtttttggag
gacagtgagaagctcagcgggatagccacaggctcaagactgtggatagagaagtga

>gi568815576f:35556426_35759532|GENSCAN_predicted_peptide_8|70_aa
MHSLLLQPQPPLLQPLQPLTVTGMYRDSVMAGCTQPTPTMPLPLPLAMELALWRVYTEVA
TADLPPTEVT

>gi568815576f:35556426_35759532|GENSCAN_predicted_CDS_8|213_bp
atgcacagcctgctactgcaaccgcagccaccgctgctgcagccgctgcagccgcttaca
gtgacgggtatgtacagagacagtgttatggcagggtgtacacagccgacccctaccatg
cccttgcccctgccgctagctatggagttggcgctgtggcgagtttataccgaggtggct
acagccgatttgccccctactgaagtgacgtga