GENSCAN 1.0	Date run:  3-Nov-116	Time: 03:55:59

Sequence gi568815576f:25101397_25307209 : 205813 bp : 47.13% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -     98     93    6                               1.05
 1.03 Term -   1522   1453   70  0  1  149   47   114 0.708  10.81
 1.02 Intr -   3028   2994   35  1  2   66   16    45 0.353  -7.88
 1.01 Init -   3928   3875   54  1  0   64   94    30 0.531   0.48
 1.00 Prom -   4212   4173   40                              -1.56

 2.00 Prom +   5698   5737   40                              -4.96
 2.01 Init +  10782  11066  285  2  0   81   61   263 0.965  20.03
 2.02 Term +  17670  17747   78  2  0   89   49    43 0.224  -1.74
 2.03 PlyA +  18032  18037    6                               1.05

 3.03 PlyA -  19447  19442    6                               1.05
 3.02 Term -  25264  24915  350  2  2   84   49   183 0.947   8.65
 3.01 Init -  34520  34469   52  2  1   65  103    33 0.521   3.83
 3.00 Prom -  42426  42387   40                              -4.46

 4.00 Prom +  43804  43843   40                              -2.46
 4.01 Init +  44791  44877   87  0  0   78   62    31 0.080   0.46
 4.02 Term +  59164  59211   48  0  0  107   48    86 0.667   3.80
 4.03 PlyA +  61344  61349    6                               1.05

 5.00 Prom +  64966  65005   40                              -3.16
 5.01 Init +  68987  69172  186  1  0   56   91    56 0.435  -0.23
 5.02 Intr +  69424  69542  119  0  2   90   75   154 0.918  13.56
 5.03 Intr +  72844  73093  250  1  1   89   95   182 0.984  16.44
 5.04 Intr +  75952  76126  175  0  1   71   67   149 0.250  10.61
 5.05 Intr +  80249  80427  179  0  2   22   76   138 0.187   5.64
 5.06 Intr +  83581  83723  143  0  2   82   78    94 0.912   6.95
 5.07 Term +  90313  90436  124  1  1   95   41   121 0.804   5.96
 5.08 PlyA +  90621  90626    6                               1.05

 6.00 Prom +  95543  95582   40                              -5.26
 6.01 Init + 100001 100075   75  1  0   98   79    59 0.960   7.11
 6.02 Intr + 101278 101396  119  0  2   53   78   194 0.999  14.16
 6.03 Intr + 102367 102499  133  1  1  115   68   104 0.997  11.75
 6.04 Intr + 103824 103966  143  2  2   72   77   215 0.992  17.95
 6.05 Term + 105651 105816  166  0  1   86   48   359 0.999  29.09
 6.06 PlyA + 105932 105937    6                               1.05

 7.00 Prom + 114582 114621   40                              -5.86
 7.01 Init + 114942 114948    7  2  1  108   28     0 0.313  -2.98
 7.02 Intr + 115403 115454   52  0  1   85   61    34 0.409  -1.63
 7.03 Intr + 118167 118270  104  0  2   96   99    57 0.857   7.42
 7.04 Intr + 120008 120087   80  0  2  129   98    63 0.947  10.67
 7.05 Intr + 123522 123640  119  2  2  104  103   110 0.999  13.36
 7.06 Intr + 126457 126589  133  1  1  101   77   157 0.963  16.55
 7.07 Intr + 128040 128182  143  2  2  101  113   251 0.999  28.05
 7.08 Term + 130208 130376  169  2  1  116   39   289 0.932  24.15
 7.09 PlyA + 130451 130456    6                               1.05

 8.00 Prom + 136699 136738   40                              -5.26
 8.01 Init + 140111 140210  100  1  1   78  100    36 0.134   4.22
 8.02 Intr + 161134 161228   95  2  2   59   74    70 0.916   2.38
 8.03 Intr + 161474 161707  234  1  0   75   87   180 0.973  14.49
 8.04 Intr + 162244 162295   52  0  1  127  110    16 0.814   6.18
 8.05 Term + 176149 176243   95  2  2   77   49    56 0.013  -1.41
 8.06 PlyA + 177665 177670    6                               1.05

 9.05 PlyA - 179012 179007    6                               1.05
 9.04 Term - 180895 180726  170  2  2  115   55   131 0.740  10.54
 9.03 Intr - 181058 180942  117  0  0   76   25    81 0.608   1.04
 9.02 Intr - 181894 181282  613  1  1   63   36   382 0.544  22.46
 9.01 Init - 191539 191456   84  1  0   79  115    -1 0.632   2.52

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  77107  76940  168  1  0   78   82    94 0.872   7.94
S.002 Init - 109778 109692   87  2  0   82  101    63 0.861   7.64


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576f:25101397_25307209|GENSCAN_predicted_peptide_1|52_aa
MGQAWWLMPVIPTLWEAQTTFGFFQISRRRWSNTVSQKAADGTGLPRKACIA

>gi568815576f:25101397_25307209|GENSCAN_predicted_CDS_1|159_bp
atgggccaggcgtggtggcttatgcccgtaatcccaacactttgggaggctcagacaacc
ttcggctttttccagatctcccgcaggaggtggagcaacaccgtcagtcagaaggcagcg
gatggcacagggcttccgcgtaaggcctgcatcgcctga

>gi568815576f:25101397_25307209|GENSCAN_predicted_peptide_2|120_aa
MDYLGDKLTVAQTHMTQWMGTVRRSFQEALNLVTTTVGHERTSAESASRTPFKRTSSFRH
LASRSRESFRRFSARSQQRFSSLRKRHTDSEPPDIDVRSMRARALAVLVHLDIASTQNSG

>gi568815576f:25101397_25307209|GENSCAN_predicted_CDS_2|363_bp
atggattacctgggagataaactcacagtggcccagacccacatgacccagtggatgggc
accgtgaggaggtccttccaggaagccctcaatttggtgaccaccacggtgggccacgaa
cggacgagtgcagagtcggccagccggacccccttcaagcgtacttcctccttccgacac
ctggcttcccggagtcgggaatccttccgccgcttctctgctcgcagccaacagagattt
tcttcactgaggaaaaggcatacagattcggaaccgccagatattgatgtaaggtccatg
agggccagggctttggccgtcctggttcaccttgatattgccagtacccagaacagtggc
tag

>gi568815576f:25101397_25307209|GENSCAN_predicted_peptide_3|133_aa
MQSIKGLEAFSTVPWAHAVTKKEVNWKDLDVLTTKAQELLHEEQFHTNLMPLSYLFTWAP
RAHLKTFMDNETQHVICQHGYLCTLFKCSTRGSRTSQVFPAKMSATWLPHPTLILPKAEG
NYQEEKNRLLATN

>gi568815576f:25101397_25307209|GENSCAN_predicted_CDS_3|402_bp
atgcaaagcatcaaaggacttgaagcatttagcacagtgccctgggcacatgctgtaaca
aaaaaagaagtgaactggaaggatctagatgttctgacaaccaaggctcaggaactcctc
catgaagaacaattccacaccaacctcatgcccctcagctacctgtttacatgggcacct
agggctcatttaaaaacatttatggataatgaaactcaacacgtcatctgccagcatggc
tacctttgtacgctcttcaaatgcagcaccagaggctccagaacatcccaggtttttcct
gccaagatgtctgcaacgtggctgccacatccaaccctcatccttcccaaagcagaaggc
aattaccaagaagaaaagaacaggctcctagctacgaattaa

>gi568815576f:25101397_25307209|GENSCAN_predicted_peptide_4|44_aa
MATMYGLREVYRVAQSHTAGGQQNQDPTQACTNPRDDRKAFLPH

>gi568815576f:25101397_25307209|GENSCAN_predicted_CDS_4|135_bp
atggctaccatgtatggcctcagagaggtttatcgagttgcccaaagtcacacggctggt
gggcagcagaaccaagacccaacccaggcttgcaccaaccccagagatgaccgcaaggcc
ttcctgccccactga

>gi568815576f:25101397_25307209|GENSCAN_predicted_peptide_5|391_aa
MRLGNTVVVGTWASGCMELPPARSMSLSNTEDERSVPRLYCEEERGPLRWGPGDALQGST
CQDQLKQCFSRQPTEPKDTDTLVHEAGSQYGTWTEQCQSGESLATESPDSSATSTRKQPP
SSRLSSLSSQTEPTSAGDQYDCSRDQRSTSVDHSSTDLESTDGMEGPPPPDACPEKRVDD
FSFIDQTSVLDSSALKTRVQLSKRSRRRAPISHSLRRSRFSESESRSPLEDETDNTWMFK
DSTGPQYMAAADEFSALFFATEEKSPRKEESDEEETASKAERTPVSHPQRMPAFPGMDPA
VLKAQLHKRPEVDSPGETPSWAPQPKSPKSPFQPGVLGSRVLPSSMDKDESIGAHGTCTI
KVSVDVMSTRDSPSLIHKAKFQKALQNKAFS

>gi568815576f:25101397_25307209|GENSCAN_predicted_CDS_5|1176_bp
atgcggttgggaaacacggtggtggtaggaacctgggcaagcgggtgcatggagcttccc
ccagccagatccatgagtctgagtaacactgaagatgagagaagtgtgcccaggctgtac
tgtgaggaggagagagggccattgaggtgggggccaggcgatgccctgcagggctccaca
tgccaggaccagctgaagcagtgtttctcccggcagcccactgaacccaaggacactgac
accctcgtgcacgaagccggcagccagtatgggacgtggacagagcagtgccagagtggg
gagagcttggccactgagtccccagatagcagtgccacatcgacaaggaaacagcccccc
agcagccgtttgtcttctctgtcctcccaaacggagcccacctcggcaggggaccagtat
gactgctccagggaccagcggagcaccagcgtggaccactccagcactgacctggaatcc
accgatgggatggaggggccgcctccaccggacgcctgccctgaaaagagagtagatgac
ttctccttcattgatcaaacctcagtcctcgactcaagtgccctcaagacccgggtgcag
ctcagcaagagaagccgccgccgggcccccatctcccactccctccggcgcagccgattt
agtgagtccgagagcagatcacctttggaggatgagactgacaacacgtggatgttcaaa
gactcaacgggacctcaatacatggcagctgctgatgaattcagtgcccttttctttgca
acagaggagaaatcacccaggaaggaggagtcggatgaggaggagacggcatccaaagct
gagaggacccctgtcagccatcctcagaggatgcctgcgtttccaggcatggatccggca
gtgctaaaggctcagctgcacaagaggccagaggtggacagtcctggcgagacccccagc
tgggcaccccaacccaagagccccaagtcccccttccagcctggggtgctgggcagtcgc
gtgctgccttccagcatggacaaggatgagagtataggagctcatggtacgtgcaccatc
aaagtcagcgttgatgtgatgagcacaagagactcaccatcccttatccacaaagccaaa
ttccagaaagccctgcaaaacaaagctttttcctaa

>gi568815576f:25101397_25307209|GENSCAN_predicted_peptide_6|211_aa
MAEQHGAPEQAAAGKSHGDLGGSYKVILYELENFQGKRCELSAECPSLTDSLLEKVGSIQ
VESGPWLAFESRAFRGEQFVLEKGDYPRWDAWSNSRDSDSLLSLRPLNIDSPHHKLHLFE
NPAFSGRKMEIVDDDVPSLWAHGFQDRVASVRAINGTWVGYEFPGYRGRQYVFERGEYRH
WNEWDASQPQLQSVRRIRDQKWHKRGRFPSS

>gi568815576f:25101397_25307209|GENSCAN_predicted_CDS_6|636_bp
atggcggaacagcacggagcacccgaacaggctgcagctggcaagagccatggagacctt
gggggcagctacaaggtgatcttgtacgaactagagaacttccaaggcaaacgctgcgag
ctctcggccgagtgccccagcctgaccgacagcctgctggagaaggtgggctccatccaa
gtggagtccgggccgtggctggcatttgagtccagggccttccgcggggagcagtttgtt
ctggagaagggggattatcctcgctgggatgcctggtccaacagccgtgatagtgacagc
cttctgtccctccggcctctgaatattgatagtccacatcacaagctgcatctgtttgag
aacccagctttcagtggccgcaagatggagatagtggatgatgacgtgcccagcctgtgg
gctcatggcttccaggaccgtgtggcgagtgtccgtgccatcaacgggacgtgggttggc
tatgagttccccggctaccgtgggcgccagtacgtgtttgagcggggcgagtaccgccac
tggaatgagtgggacgccagccagccgcagctgcagtctgtgcgccgcatccgtgaccag
aagtggcacaagcggggccgcttccccagcagctga

>gi568815576f:25101397_25307209|GENSCAN_predicted_peptide_7|268_aa
MTAPSNLYSTSSLHEFAYPRSTAVTHLGTGTSGEGINATSRWPSFTALAGAGVTGHSCTG
QSTMASDHQTQAGKPQSLNPKIIIFEQENFQGHSHELNGPCPNLKETGVEKAGSVLVQAG
PWVGYEQANCKGEQFVFEKGEYPRWDSWTSSRRTDSLSSLRPIKVDSQEHKIILYENPNF
TGKKMEIIDDDVPSFHAHGYQEKVSSVRVQSGTWVGYQYPGYRGLQYLLEKGDYKDSSDF
GAPHPQVQSVRRIRDMQWHQRGAFHPSN

>gi568815576f:25101397_25307209|GENSCAN_predicted_CDS_7|807_bp
atgactgcccccagtaacctctattctacttccagtctccatgaatttgcctaccctagg
agcacagcggtcactcatcttggcaccggcacttctggggaaggtataaatgccacctcc
cgctggccgagcttcacggcactcgcaggggctggtgtcactggtcattcctgcacagga
cagtccaccatggcctcagatcaccagacccaggcgggcaagccacagtccctcaacccc
aagatcatcatctttgagcaggaaaactttcaaggccactcgcatgagctcaatgggccc
tgccccaacctgaaggaaactggcgtggagaaggcaggttctgtcctagtgcaggctgga
ccctgggtgggctatgaacaggccaactgcaagggcgagcagtttgtgtttgagaagggt
gagtacccccgctgggactcatggaccagcagccgaaggacggactccctcagctccctg
aggcccatcaaagtggacagccaagagcacaagatcatcctctatgaaaaccccaacttc
accgggaagaagatggaaatcatagatgacgatgtacccagcttccacgcccatggctac
caggagaaggtgtcatctgtgcgggtgcagagtggcacgtgggttggctaccagtacccc
ggctaccgtgggctgcagtacctgctggagaagggagactacaaggacagcagcgacttt
ggggcccctcacccccaggtgcagtccgtgcgccgtatccgcgacatgcagtggcaccaa
cgtggtgccttccacccctccaactag

>gi568815576f:25101397_25307209|GENSCAN_predicted_peptide_8|191_aa
MRAQDGMPASESPGIWISTPPIFCYSNGIGFYQENSERLGNIAPFQQKAQKNQGTVASVL
CCTWKAQYMGLCLGPQRSEGSKEQTMGSTQTSATHWSLSPLLQDPSTTRRREKVYDPPPC
NSPMISMDTQRYTLQHPAKTWYLVLECGYESWNSGAILLPDTATIRFLNLFPTFPPFRFH
KTAIVIMAHSQ

>gi568815576f:25101397_25307209|GENSCAN_predicted_CDS_8|576_bp
atgcgtgctcaggatgggatgcctgcctcagaatcccctggaatatggatttccactcca
cccatcttctgctacagcaatggaattggtttctatcaagagaactccgagaggttggga
aatattgctccatttcaacagaaggcccagaaaaatcaaggcaccgtggccagcgttctc
tgctgcacctggaaggcccagtacatgggcttatgtctggggccccagaggagtgagggc
agcaaagaacagacaatgggctccacgcagacctctgcaacacactggagcctgagccca
ctgctgcaggacccatcaacaacaagaaggagggagaaggtgtatgacccccctccctgc
aactctcccatgatctccatggacacccaaagatatacactgcagcacccagcaaagacg
tggtacttggtgttggagtgtggatatgagtcatggaactctggggctatattgctgcca
gacacggcaaccatccgatttctcaatcttttccccacctttcccccctttcgattccac
aaaaccgccattgtcatcatggcccattctcaatga

>gi568815576f:25101397_25307209|GENSCAN_predicted_peptide_9|327_aa
MTCVNTKWLEIYQPYLSWPTGVLLHKCMGAALGTLERSLPESPPPAIRCPISETGTGRPA
PHRQFRGVTRTQDSDDSMPDPPGRRRSLTAAWGRRRGDQRGPGQLVPGIGQDGPLAGAGG
RSRLALLHGHQVTGICQHSLRVRHVGEFWRRRRLLGPGWDALPPPPPPPPAEPRPGGTGA
APGQPLLGAPHQRPASAAGCSPPGSQCAFRSAASRAAPQLIPRGSAGSSRPDAHPEKPWA
PCPLLKGHRGGLCYLDTVVLKRDSINQHPPGGNDEAPALVQATCEQRPAGRAPNLAPERT
RKPAVRIQRRVKAGESCVSQAKQSKVG

>gi568815576f:25101397_25307209|GENSCAN_predicted_CDS_9|984_bp
atgacttgtgttaataccaaatggctggaaatataccaaccctacctgtcatggcctact
ggggtcctgctacataaatgcatgggcgccgcgctgggcactttggagcgctctctcccg
gagtcccccccaccggccatccgatgccccatttcagagactggaacggggaggccggcc
ccgcatcgccagttccgcggtgtcacccgcacccaggacagcgacgactcaatgcccgac
cctcccggacgcaggaggtcgctgacggccgcttggggacggcggcgtggggaccagcgc
gggccggggcagctggtacctgggatcgggcaggacggtcctcttgctggcgcgggcggc
cggagtcgccttgctcttctccatggccatcaggtaactggcatctgccagcacagcctc
cgggtccgccacgttggcgagttttggcggcggcggcggttactcggacccggatgggac
gcgctgccgccaccgccgccgccgccgccagctgagccccgacctggtgggactggggca
gccccagggcagcccctgctcggcgcgccccaccagcgccctgcaagcgccgcaggctgt
agcccgccggggtcgcagtgcgccttccgctccgccgcctcgcgcgccgccccccagctc
attccgcgagggtctgcggggagctcgcggcccgacgctcatccagagaagccctgggcc
ccgtgcccactactcaaggggcatcggggaggcctctgctacctggacacagtagttctc
aaacgggacagcatcaatcagcatcctccaggaggtaatgatgaagcccctgctctggtc
caagctacctgtgaacagcgcccagcgggccgggcccccaacctcgctcctgaacgtacc
cgcaagcccgccgtgagaattcagcgaagagtaaaggctggagaaagttgcgtgtctcag
gctaagcagagcaaagtggggtga