GENSCAN 1.0	Date run:  3-Nov-116	Time: 20:07:09

Sequence gi568815575r:77868877_78069638 : 200762 bp : 39.45% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.09 Intr -   2049   1932  118  2  1   56   95   153 0.276  12.35
 1.08 Intr -   6721   6567  155  1  2   99   26   101 0.161   2.95
 1.07 Intr -  26580  26289  292  2  1   67   32   160 0.034   4.51
 1.06 Intr -  26962  26828  135  0  0   55   -6   164 0.178   2.46
 1.05 Intr -  30710  30606  105  1  0   -5   55   163 0.319   2.11
 1.04 Intr -  39506  39438   69  1  0   29   97    84 0.304   0.78
 1.03 Intr -  41887  41593  295  2  1    6   63   190 0.279   3.44
 1.02 Intr -  49726  49564  163  1  1   76   61    80 0.101   2.73
 1.01 Init -  52398  52294  105  0  0   79  115    34 0.547   5.47
 1.00 Prom -  54491  54452   40                              -4.95

 2.00 Prom +  55622  55661   40                              -5.35
 2.01 Init +  62333  62453  121  1  1   56   74    71 0.053   2.90
 2.02 Term +  93747  93970  224  1  2  132   49   251 0.342  21.70
 2.03 PlyA +  95993  95998    6                               1.05

 3.02 PlyA -  96318  96313    6                               1.05
 3.01 Sngl - 100762  99998  765  1  0  111   49  1053 0.993  99.54
 3.00 Prom - 101010 100971   40                              -8.45

 4.00 Prom + 101928 101967   40                             -12.23
 4.01 Init + 102269 102316   48  1  0   71   97    21 0.736   2.30
 4.02 Intr + 102745 102885  141  0  0   80  115   129 0.946  14.43
 4.03 Intr + 119366 119855  490  1  1   76   90   452 0.737  35.85
 4.04 Intr + 120357 121082  726  1  0   70   91   492 0.994  38.17
 4.05 Intr + 129602 129808  207  0  0   59  100   218 0.981  18.23
 4.06 Intr + 134197 134360  164  2  2   47   81   228 0.822  16.77
 4.07 Intr + 140226 140387  162  2  0   64  100    42 0.724   2.25
 4.08 Intr + 144003 144236  234  2  0   75   98   191 0.993  15.76
 4.09 Intr + 145786 145877   92  0  2   96   68    76 0.995   4.27
 4.10 Intr + 146878 147005  128  1  2   19   91   204 0.358  13.20
 4.11 Intr + 151368 151522  155  1  2   88   88   148 0.356  13.67
 4.12 Intr + 152069 152203  135  1  0   82   95    93 0.989   9.24
 4.13 Intr + 160374 160568  195  2  0   70  116   111 0.984  10.79
 4.14 Intr + 162524 162706  183  1  0   91   88   158 0.999  15.16
 4.15 Intr + 164729 164945  217  1  1   24   82   191 0.991   9.25
 4.16 Intr + 169960 170106  147  2  0   85   91   179 0.998  17.19
 4.17 Intr + 171715 171857  143  2  2   40   91   139 0.722   8.55
 4.18 Intr + 173709 173912  204  2  0   54  110   301 0.973  27.37
 4.19 Intr + 174441 174558  118  2  1   68   84   121 0.980   8.82
 4.20 Intr + 176594 176696  103  0  1   69   93    33 0.967   0.21
 4.21 Term + 177418 177694  277  1  1   19   42   313 0.388  13.75
 4.22 PlyA + 179540 179545    6                               1.05

 5.00 Prom + 186220 186259   40                              -5.95
 5.01 Init + 188693 188780   88  1  1   86   78    90 0.770   8.65
 5.02 Intr + 193529 193632  104  0  2   52   62   108 0.305   3.57
 5.03 Term + 197247 197414  168  2  0   29   54   146 0.589   2.20
 5.04 PlyA + 198424 198429    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:77868877_78069638|GENSCAN_predicted_peptide_1|479_aa
MNKVTELSNSMPYLRTTTGMAEAYGMNGNNKEIVKLRFPLGKEEQHSQQLLLRNYTVSIC
PDLMTLRLKEAPPYNKVGHHHNKRLGGDKGSNKAHTIGEVTVAAAAAAAATTPPSASLFP
PPAAAASRLYPSLPRLPPLPGDAPAGSRAATGKRATGHVKRNAWSRASFSCPLLPPGRHA
ASSGSLLGDIKPGGWELNICTSTTTTVPVSRRFSALLTKGNIVKVKLELRQYSCCFGANS
LQVPLKILHEGGEFQGLLNESLKDSVLATSSHFGLRKLRNISQLRMRAWKAPSRSKVSLI
EGRGANMAARWRFWCVSVTMVVALLIVCDVPSASAQRKKEVRTRFPAAWAFPNDWGLRGS
VRLFPAPFPCRFYAFGGFNYAVFGVVEFMVLSEKVSQLMEWTNKRPVIRMNGDKFRRLVK
APPRNYSVIVMFTALQLHRQQADEEFQILANSWRYSSAFTNRIFFAMVDFDEGSDVFQM

>gi568815575r:77868877_78069638|GENSCAN_predicted_CDS_1|1437_bp
atgaataaagttacagagttgtcaaacagcatgccatatttaaggaccaccactggtatg
gctgaggcatatggcatgaatggtaacaacaaggagattgtaaagctaagattcccattg
ggaaaggaagaacagcacagccagcaactacttctcaggaactatactgtcagtatctgc
cctgatctcatgactctgagattaaaagaagctcctccttataacaaggttggacatcac
cataataaaagattgggaggagacaaaggctccaacaaagctcacacaatcggagaagtc
acagtagctgcggctgcggcggcggcagcaacaactcctccctctgcttctcttttccca
ccccccgccgcggcggccagccgcctttacccctccctccctcgactacccccacttccg
ggtgatgcccctgccggaagcagggccgccacgggaaagagagcgactggtcacgtgaaa
aggaacgcgtggtctagagccagcttctcctgccccctgctgcccccgggccgacacgca
gcctcgagtgggtctttgttaggtgacattaagccaggaggatgggaactcaacatctgt
acctctacaactaccacagtacccgtgtctagacgatttagtgcgcttttgaccaaggga
aacatcgtgaaggtgaagctagaactgcggcaatacagctgctgctttggtgccaattcg
cttcaggtacccttgaaaatattacatgaaggcggcgaatttcaaggacttctaaatgag
tctttgaaagattctgttctagcaacttcaagccattttggactccgaaaactccgcaat
atttcacaactgcgcatgcgtgcttggaaagcacctagccggagcaaagtttcacttata
gaagggagaggagcgaacatggcagcgcgttggcggttttggtgtgtctctgtgaccatg
gtggtggcgctgctcatcgtttgcgacgttccctcagcctctgcccaaagaaagaaggag
gtgagaacgcggtttccagcagcatgggcttttcccaatgactggggcttaagagggtct
gttcgcctcttcccagccccctttccctgccgcttctatgcctttggtggcttcaattac
gcggttttcggagttgtggaattcatggtgttatctgaaaaggttagtcagctgatggaa
tggactaacaaaagacctgtaataagaatgaatggagacaagttccgtcgccttgtgaaa
gccccaccgagaaattactccgttatcgtcatgttcactgctctccaactgcatagacag
caagctgatgaagaattccagatcctggcaaactcctggcgatactccagtgcattcacc
aacaggatattttttgccatggtggattttgatgaaggctctgatgtatttcagatg

>gi568815575r:77868877_78069638|GENSCAN_predicted_peptide_2|114_aa
MIVNEHAAFKHLFNKAHLAPPLIHSTLSGHSTCFREHRVGDPSSASSLGIAVSLGRPVLS
RSSSGTVDLLEEVGLQIRDTAFSSTKLLEAISTVSAQVEELAVKCTENARFLKT

>gi568815575r:77868877_78069638|GENSCAN_predicted_CDS_2|345_bp
atgattgttaacgagcatgctgccttcaagcatctgtttaacaaagcacatcttgcaccg
cccttaatccattcaactctgagtggacacagcacatgtttcagagagcacagggttggg
gacccttcttcagcatcttccctgggcattgctgtgagtttaggccggcccgttttgagc
aggagcagcagcggaacagtagacctgctggaggaagtggggctgcagatcagagacaca
gcattttcgtcaaccaaacttcttgaagccatatctacagtatcagctcaagtggaagag
cttgccgtcaaatgtacggaaaatgcacgtttccttaaaacatga

>gi568815575r:77868877_78069638|GENSCAN_predicted_peptide_3|254_aa
MAAYKLVLIRHGESTWNLENRFSCWYDADLSPAGHEEAKRGGQALRDAGYEFDICLTSVQ
KRVIRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWRRSYD
VPPPPMEPDHPFYSNISKDRRYADLTEDQLPSYESPKDTIARALPFWNEEIVPQIKEGKR
VLIAAHGNSLQGIAKHVEGLSEEAIMELNLPTGIPIVYELDKNLKPIKPMQFLGDEETVC
KAIEAVAAQGKAKK

>gi568815575r:77868877_78069638|GENSCAN_predicted_CDS_3|765_bp
atggccgcctacaaactggtgctgatccggcacggcgagagcacatggaacctggagaac
cgcttcagctgctggtacgacgccgatctgagcccggcgggccacgaggaggcgaagcgc
ggcgggcaggcgctacgagatgctggctatgagtttgacatctgcctcacctcagtgcag
aagagagtgatccggaccctctggacagtgctagatgccattgatcagatgtggctgcca
gtggtgaggacttggcgcctcaatgagcggcactatgggggtctaaccggtctcaataaa
gcagaaactgctgcaaagcatggtgaggcccaggtgaagatctggaggcgctcctatgat
gtcccaccacctccgatggagcccgaccatcctttctacagcaacatcagtaaggatcgc
aggtatgcagacctcacagaagatcagctaccctcctatgagagtccgaaggatactatt
gccagagctctgcccttctggaatgaagaaatagttccccagatcaaggaggggaaacgt
gtactgattgcagcccatggcaacagcctccagggcattgccaagcatgtggagggtctc
tctgaagaggctatcatggagctgaacctgccgactggtattcccatcgtctatgaattg
gacaagaacttgaagcctatcaagcccatgcagtttctgggggatgaagagacggtgtgc
aaagccatagaagctgtggctgcccagggcaaggccaagaagtga

>gi568815575r:77868877_78069638|GENSCAN_predicted_peptide_4|1422_aa
MTGTEKGLVSGRRGGQECNEEIKMDPSMGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVH
HIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHNPDPLPVLTDTLFLTVTASLT
LPWDHIQSTLLKTKGVTDIKIYPQKRTVAVTIIPSIVNANQIKELVPELSLDTGTLEKKS
GACEDHSMAQAGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQP
HLISVEEMKKQIEAMGFPAFVKKQPKYLKLGAIDVERLKNTPVKSSEGSQQRSPSYTNDS
TATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVKYNASSVTPESLRKAIEA
VSPGLYRVSITSEVESTSNSPSSSSLQKIPLNVVSQPLTQETVINIDGMTCNSCVQSIEG
VISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLSDTNEPLVVIAQP
SSEMPLLTSTNEFYTKGMTPVQDKEEGKNSSKCYIQVTGMTCASCVANIERNLRREEGIY
SILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIENADEGDGVLELVVRGMTCAS
CVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIEFFGGWYFYIQAYKA
LKHKTANMDVLIVLATTIAFAYSLIILLVAMYERAKVNPITFFDTPPMLFVFIALGRWLE
HIAKGKTSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPV
DGRVIEGHSMVDESLITGEAMPVAKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVK
LVEEAQTSKAPIQQFADKLSGYFVPFIVFVSIATLLVWIVIGFLNFEIVETYFPGYNRSI
SRTETIIRFAFQASITVLCIACPCSLGLATPTAVMVGTGVGAQNGILIKGGEPLEMAHKV
KVVVFDKTGTITHGTPVVNQVKVLTESNRISHHKILAIVGTAESNSEHPLGTAITKYCKQ
ELDTETLGTCIDFQVVPGCGISCKVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSS
TSSSMIIDAQISNALNAQQYKVLIGNREWMIRNGLVINNDVNDFMTEHERKGRTAVLVAV
DDELCGLIAIADTVKPEAELAIHILKSMGLEVVLMTGDNSKTARSIASQVGITKVFAEVL
PSHKVAKVKQLQEEGKRVAMVGDGINDSPALAMANVGIAIGTGTDVAIEAADVVLIRNDL
LDVVASIDLSRKTVKRIRINFVFALIYNLVGIPIAAGVFMPIGLVLQPWMGSAAMAASSV
SVVLSSLFLKLYRKPTYESYELPARSQIGQKSPSEISVHVGIDDTSRNSPKLGLLDRIVN
YSRASINSLLSDKRSLNSVVTSEPDKHSLLVGDFREDDDTAL

>gi568815575r:77868877_78069638|GENSCAN_predicted_CDS_4|4269_bp
atgactggcacagagaagggtttggtgagtggtagaagaggaggccaggaatgtaatgag
gaaatcaaaatggatccaagtatgggtgtgaattctgttaccatttctgttgagggtatg
acttgcaattcctgtgtttggaccattgagcagcagattggaaaagtgaatggtgtgcat
cacattaaggtatcactggaagaaaaaaatgcaactattatttatgaccctaaactacag
actccaaagaccctacaggaagctattgatgacatgggctttgatgctgttatccataat
cctgaccctctccctgttttaactgacaccttgtttctgactgttacggcgtcactgact
ttgccatgggaccatatccaaagcacattgctgaagaccaagggtgtgacagacattaaa
atttaccctcagaaaagaactgtagcagtgacaataatcccttctatagtgaatgccaat
cagataaaagagctggttccagaactcagtttagatactgggacactggagaaaaagtca
ggagcttgtgaagatcatagtatggctcaagctggtgaagtcgtgctgaagatgaaagtg
gaagggatgacctgccattcatgtactagcactattgaaggaaaaattgggaaactgcaa
ggtgttcagcgaattaaagtctccctggacaatcaagaagctactattgtttatcaacct
catcttatctcagtagaggaaatgaaaaagcagattgaagctatgggctttccagcattt
gtcaaaaagcagcccaagtacctcaaattgggagctattgatgtagaacgtctaaagaac
acaccagttaaatcctcagaagggtcacagcaaaggagtccatcatataccaatgattca
acagccactttcatcattgatggcatgcattgtaaatcatgtgtgtcaaatattgaaagt
actttatctgcactccaatatgtaagcagcatagtagtttctttagagaataggtctgcc
attgtgaagtataatgcaagctcagtcactccagaatccctgagaaaagcaatagaggct
gtatcaccggggctatatagagttagtatcacaagtgaagttgagagtacctcaaactct
ccctccagctcatctcttcagaagattcctttgaatgtagttagccagcctctgacacaa
gaaactgtgataaacattgatggcatgacttgtaattcctgtgtgcagtctattgagggt
gtcatatcaaaaaagccaggtgtaaaatccatacgagtctcccttgcaaatagcaatggg
actgttgagtatgatcctctactaacctctccagaaacgttgagaggagcaatagaagac
atgggatttgatgctaccttgtcagacacgaatgagccgttggtagtaatagctcagcct
tcatcggaaatgccgcttttgacttcaactaatgaattttatactaaagggatgacacca
gttcaagacaaggaggaaggaaagaattcatctaagtgttacatacaggtcactggcatg
acttgcgcttcctgtgtagcaaacattgaacggaatttaaggcgggaagaaggaatatat
tctatacttgtggccctgatggctggcaaggcagaagtaaggtataatcctgctgttata
caacccccaatgatagcagagttcatccgagaacttggatttggagccactgtgatagaa
aatgctgatgaaggagatggtgttttggaacttgttgtgaggggaatgacgtgtgcctcc
tgcgtacataaaatagagtctagtctcacaaaacacagagggatcctatactgctccgtg
gccctggcaaccaacaaagcacatattaaatatgacccagaaattattggtcctagagat
attatccatacaattgaatttttcggaggctggtacttctacattcaggcttataaagca
ctgaagcataagacagcaaatatggacgtactgattgtgctggcaaccaccattgcattt
gcctactctttgattattcttctagttgcaatgtatgagagagccaaagtgaaccctatt
actttctttgacacaccccctatgctgtttgtgtttattgcactaggccgatggctggaa
catatagcaaagggcaaaacatcagaggctcttgcaaagttaatttcactacaagctaca
gaagcaactattgtaactcttgattctgataatatcctcctcagtgaagaacaagtggat
gtggaacttgtacaacgtggagatatcattaaagtagttccaggaggcaaatttccagtg
gatggtcgtgttattgaaggacattctatggtagatgagtccctcatcacaggggaggca
atgcctgtggctaagaaacctggcagcacagtgattgctggttccattaaccagaacggg
tcactgcttatctgcgcaacacatgttggagcagacacaaccctttctcaaattgtcaaa
cttgtggaagaggcacaaacatcaaaggctcctatccagcagtttgcagacaaactcagt
ggctattttgttccttttattgtttttgtttccattgccaccctcttggtatggattgta
attggatttctgaattttgaaattgtggaaacctactttcctggctacaatagaagtatc
tcccgaacagaaacgataatacgatttgctttccaagcctctatcacagttctgtgtatt
gcatgtccctgttcactgggactggccactccaactgctgtgatggtgggtacaggagta
ggtgctcaaaatggcatactaataaaaggtggagagccattggagatggctcataaggta
aaggtagtggtatttgataagactggaaccattactcacggaaccccagtggtgaatcaa
gtaaaggttctaactgaaagtaacagaatatcacaccataaaatcttggccattgtggga
actgctgaaagtaacagtgaacaccctctaggaacagccataaccaaatattgcaaacag
gagctggacactgaaaccttgggtacctgcatagatttccaggttgtgccaggctgtggt
attagctgtaaagtcaccaatattgaaggcttgctacataagaataactggaatatagag
gacaataatattaaaaatgcatccctggttcaaattgatgccagtaatgaacagtcatca
acttcgtcttccatgattattgatgcccagatctcaaatgctcttaatgctcagcagtat
aaagtcctcattggtaaccgggagtggatgattagaaatggtcttgtcattaataacgat
gtaaatgatttcatgactgaacatgagagaaaaggtcggactgctgtattagtagcagtt
gatgatgagctgtgtggcttgatagccattgcagacacagtgaagcctgaagcagaactg
gctatccatattctgaaatctatgggcttagaagtagttctgatgactggagacaacagt
aaaacagctagatctattgcttctcaggttggcattactaaggtgtttgctgaagttcta
ccttctcacaaggttgctaaagtgaagcaacttcaagaggaggggaaacgggtagcaatg
gtgggagatggaatcaatgactccccagctctggcaatggctaatgtgggaattgctatt
ggcacaggcacagatgtagccattgaagcagctgatgtggttttgataaggaatgatctt
ctggatgtagtggcaagtattgacttatcaagaaagacagtcaagaggattcggataaat
tttgtctttgctctaatttataatctggttggaattcccatagctgctggagtttttatg
cccattggtttggttttgcagccctggatgggatctgcagcaatggctgcttcatctgtt
tctgtagtactttcttctctcttccttaaactttacaggaaaccaacttacgagagttat
gaactgcctgcccggagccagataggacagaagagtccttcagaaatcagcgttcatgtt
ggaatagatgatacctcaaggaattctcctaaactgggtttgctggaccggattgttaat
tatagcagagcctctataaactcactactgtctgataaacgctccctaaacagtgttgtt
accagtgaacctgacaagcactcactcctggtgggagacttcagggaagatgatgacact
gcattataa

>gi568815575r:77868877_78069638|GENSCAN_predicted_peptide_5|119_aa
MVEGEGEAGTSYMAEGEGEARYLLHKVKDGTFAGTAPKTGPEPAEQPQELPGSKKSGGIC
NGQKSVVSGTSNINITWEIDENSSSWAALQTSESTASTVEPSNSQFNKPSSMILIHAIV

>gi568815575r:77868877_78069638|GENSCAN_predicted_CDS_5|360_bp
atggtggaaggtgaaggggaagcaggtacgtcttacatggcagaaggcgaaggagaagca
agatatcttcttcacaaggtgaaggatggcacatttgctggaactgctcccaaaacaggg
cctgaaccagctgagcaaccccaagagcttccagggagcaagaaatctggaggaatctgt
aatgggcagaagagtgtggtctctggaaccagtaacatcaacatcacctgggaaattgat
gaaaattcaagttcttgggctgctctccagacaagtgaatctacagcttctacggtggag
cccagcaattcacagttcaacaagccttccagcatgattctgattcatgctattgtttga