GENSCAN 1.0	Date run:  4-Nov-116	Time: 03:35:33

Sequence gi568815575r:16745038_16969220 : 224183 bp : 43.10% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   9908  10056  149  2  2   58   76   174 0.889  13.08
 1.02 Intr +  11626  11684   59  2  2   48   74    16 0.481  -5.20
 1.03 Intr +  12125  12272  148  1  1   53   93   140 0.580  10.81
 1.04 Term +  15195  15322  128  1  2   86   37   169 0.999  10.04
 1.05 PlyA +  15844  15849    6                               1.05

 2.00 Prom +  34994  35033   40                              -3.76
 2.01 Init +  40688  40703   16  1  1   76  108     6 0.473   1.79
 2.02 Intr +  41911  41997   87  2  0   32   85   106 0.464   4.64
 2.03 Intr +  42990  43039   50  1  2   60   67    51 0.378  -1.40
 2.04 Term +  45710  45802   93  1  0   36   49   127 0.595   1.43
 2.05 PlyA +  47585  47590    6                               1.05

 3.00 Prom +  49938  49977   40                              -4.16
 3.01 Init +  55947  56098  152  2  2   36   58   175 0.727   6.82
 3.02 Intr +  72911  73055  145  2  1   84   50    86 0.849   4.68
 3.03 Intr +  73537  73840  304  0  1  114   58   132 0.897   8.96
 3.04 Intr +  75127  75218   92  2  2   74   70    76 0.729   4.11
 3.05 Intr +  83057  83227  171  1  0   11   96   127 0.398   5.94
 3.06 Intr +  84539  84733  195  1  0  -15   80   289 0.689  17.41
 3.07 Intr +  87586  87705  120  0  0   50   78   161 0.996  11.99
 3.08 Intr +  92556  92648   93  2  0   68   63    57 0.700   1.36
 3.09 Term +  96391  96729  339  0  0   81   44   360 0.999  25.44
 3.10 PlyA +  97198  97203    6                               1.05

 4.12 PlyA -  98611  98606    6                               1.05
 4.11 Term - 100066  99998   69  1  0   83   40    83 0.950   0.94
 4.10 Intr - 100901 100791  111  2  0   61  101    27 0.742   1.88
 4.09 Intr - 104264 104207   58  1  1   61   80    87 0.652   4.09
 4.08 Intr - 107591 107374  218  2  2   80   81    48 0.255   0.60
 4.07 Intr - 107838 107712  127  2  1   97    8    96 0.943   3.18
 4.06 Intr - 108805 108645  161  1  2  113   67   185 0.981  17.69
 4.05 Intr - 112672 112557  116  2  2   89   47    20 0.895  -1.83
 4.04 Intr - 113812 113639  174  2  0   57   91   161 0.904  13.21
 4.03 Intr - 118063 117918  146  0  2   98   66   118 0.992  10.53
 4.02 Intr - 124217 124039  179  2  2   58   69   189 0.942  12.72
 4.01 Init - 124561 124457  105  1  0   60   80    91 0.359   5.72
 4.00 Prom - 128670 128631   40                              -0.66

 5.00 Prom + 130614 130653   40                              -0.96
 5.01 Sngl + 153029 153343  315  1  0   67   43   434 0.889  32.75
 5.02 PlyA + 154697 154702    6                               1.05

 6.00 Prom + 165888 165927   40                              -3.16
 6.01 Init + 201825 202097  273  2  0   89   94   553 0.998  50.97
 6.02 Term + 211703 211813  111  1  0  112   48    49 0.816   1.86
 6.03 PlyA + 214892 214897    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:16745038_16969220|GENSCAN_predicted_peptide_1|161_aa
XVKEEVFWRNYFYRVSLIKQSAQLTALAAQQQAAGKEEKSNGREQDLPLAEAVRPKTPPV
VIKSQLKTQEDEEEISTSPGVSEFVSDAFDACNLNQEDLRKEMEQLVLDKKQEETAVLEE
DSADWEKELQQELQEYEVVTESEKRDENWDKEIEKMLQEEN

>gi568815575r:16745038_16969220|GENSCAN_predicted_CDS_1|486_bp
nntgtgaaggaagaagtgttctggaggaactacttttaccgcgtctccctgattaagcag
tcagcccagctcacggccctggctgcccaacagcaggccgcagggaaggaggagaagagc
aatggcagagagcaagatttgccgctggcagaggcagtacggcccaaaacgccacccgtt
gtaatcaaatctcagcttaaaactcaagaggatgaggaagaaatttctactagcccaggt
gtttctgagtttgtcagtgatgccttcgatgcctgtaacctaaatcaggaagatctaagg
aaagaaatggagcaactagtgcttgacaaaaagcaagaggagacagccgtactggaagag
gattctgcagattgggaaaaagaactgcagcaggaacttcaagaatatgaagtggtgaca
gaatctgaaaaacgagatgaaaactgggataaggaaatagagaaaatgcttcaagaggaa
aattag

>gi568815575r:16745038_16969220|GENSCAN_predicted_peptide_2|81_aa
MNEVPITAVTVLPALSAAVRGLAGVVGSPSWRRAERSSACRTEKEAVDQCPHQSDAVEKA
GQLSLPSFADDKLLNDVNSLA

>gi568815575r:16745038_16969220|GENSCAN_predicted_CDS_2|246_bp
atgaatgaagtgccaatcaccgccgtcaccgtgctcccggcgctgagcgccgccgtccgg
gggctcgctggggtcgtgggctcgccctcctggcgtcgggcagaaagatccagtgcttgc
aggactgaaaaagaagctgtggaccaatgtcctcaccagtcagatgctgtggagaaggct
gggcagctttcactgccctcatttgctgatgacaagctgctcaacgatgttaactcactt
gcctaa

>gi568815575r:16745038_16969220|GENSCAN_predicted_peptide_3|536_aa
MCDAPDPLALLLLLSLCGTPAPVLPSVMNKSSLGLARSDASAMLPVQPTEPVLEMSAFCQ
SRGEMVEKELVLLRIKVLDSRVLCPHSVGGNFTWKSPLGFEIGTMEEAGICGLGVKADML
CNSQSNDILQHQGSNCGGTSNKHSLEEDEGSDFITENRNLVSPAYCTQESREEIPGGEAR
TDPPDGQQDSECNRNKEKTLGKEVLLLMQALNTLSTPEEKLAALCKKYADLLEESRSVQK
QMKILQKKQAQIVKEKVHLQSEHSKAILARSKLESLCRELQRHNKTLKEENMQQAREEEE
RRKEATAHFQITLNEIQAQLEQHDIHNAKLRQENIELGEKLKKLIEQYALREEHIDKVFK
HKELQQQLVDAKLQQTTQLIKEADEKHQREREFLSLYMDKFEEFQTTMAKSNELFTTFRQ
EMEKKTVRDKEYKALQIKLERLEKLCRALQTERNELNEKVEVLKEQVSIKAAIKAANRDL
ATPVMQPCTALDSHKELNTSSKRALGAHLEAEPKSQRSAVQKPPSTGSAPAIESVD

>gi568815575r:16745038_16969220|GENSCAN_predicted_CDS_3|1611_bp
atgtgtgatgcccctgaccccttagctctcttgcttctgctctcgctgtgtggcacgcct
gctcctgttttgccttccgtcatgaataagagctccctgggcctcgccagaagcgatgcc
agcgccatgcttcctgtacagccaacagaaccggtcttggagatgtctgcattttgccag
agtcggggagagatggttgagaaagaacttgtgcttctaagaataaaagtcttggacagt
cgtgtcctatgcccacattcagttggtgggaacttcacgtggaagtcgccccttggtttt
gaaattggcacaatggaagaagctggaatttgtgggctaggggtgaaagcagatatgttg
tgtaactctcaatcaaatgatattcttcaacatcaaggctcaaattgtggtggcacaagt
aacaagcattcattggaagaggatgaaggcagtgactttataacagagaacaggaatttg
gtgagcccagcatactgcacgcaagaatcaagagaggaaatccctgggggagaagctcga
acagatccccctgatggtcagcaagattcagagtgcaacaggaacaaagaaaaaacttta
ggaaaagaagttttattactgatgcaagccctaaacaccctttcaaccccagaggagaag
ctggcagctctctgtaagaaatatgctgatcttctggaggagagcaggagtgttcagaag
caaatgaagatcctgcagaagaagcaagcccagattgtgaaagagaaagttcacttgcag
agtgaacatagcaaggctatcttggcaagaagcaagctagaatctctttgcagagaactt
cagcgtcacaataagacgttaaaggaggaaaatatgcagcaggcacgagaggaagaagaa
cgacgtaaagaagcaactgcacatttccagattaccttaaatgaaattcaagcccagctg
gagcagcatgacatccacaacgccaaactccgacaggaaaacattgagctgggggagaag
ctaaagaagctcatcgaacagtacgcactgagggaagagcacattgataaggtgttcaaa
cataaggaactgcaacagcagctcgtggatgccaaactgcagcaaacgacacaactgata
aaagaagctgatgaaaaacatcagagagagagagagtttctttctctttatatggataag
tttgaagaattccagactaccatggcaaaaagcaatgaactgtttacaaccttcagacag
gaaatggaaaagaaaacagtccgtgataaagagtacaaggcccttcaaataaaactggaa
cggttagagaagctgtgcagggctcttcagacagaaaggaatgagctcaatgagaaggtg
gaagtcctgaaagagcaggtatccatcaaagcggccatcaaagcggcgaacagggattta
gcaacacctgtgatgcagccctgtactgccctggattctcacaaggagctgaacacttcc
tcgaaaagagccctgggagcgcacctggaggctgagcccaagagtcagagaagcgctgtg
caaaagcccccgtccacaggctctgctccggccatcgagtcggttgactaa

>gi568815575r:16745038_16969220|GENSCAN_predicted_peptide_4|487_aa
MGIGETRPVGFCYTCICLPDWVAQPLYVQVVILEQPLNRVGFLQISVFEDTVEERVINEE
YKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLV
VARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHII
ATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDH
TVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSN
TTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEI
FQVCDSFLVSVCQEMKSRDSSVKLYQTRGSTIEKNVLYVVLHGDAHRVSKIGEEQSAEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENIYNDEESDVTTS
ELEGQGS

>gi568815575r:16745038_16969220|GENSCAN_predicted_CDS_4|1464_bp
atggggattggagagaccaggcctgtgggcttctgctacacgtgcatttgtcttcccgac
tgggtcgcgcagcccctgtacgtacaggtcgtcatcttagaacagccacttaatcgtgtg
ggctttctccaaatttcagtgtttgaagatactgtggaggagcgtgtcatcaatgaagaa
tataaaatctggaagaagaatacaccgtttctatatgacctggttatgacccatgctctt
cagtggcccagtcttaccgttcagtggcttcctgaagtgactaaacctgaaggaaaagat
tatgcccttcattggctagtgctggggactcatacgtctgatgagcagaatcatctggtg
gttgctcgagtacatattcccaatgatgatgcacagtttgatgcttcccattgtgacagt
gacaagggtgaatttggtggctttggttctgtaacaggaaaaattgaatgtgaaattaaa
atcaatcacgaaggagaagtaaaccgtgctcgttacatgccgcagaatcctcacatcatt
gctacaaaaacaccatcttctgatgtgttggtttttgactatacaaaacaccctgctaaa
ccagacccaagtggagaatgtaatcctgatctcagattaagaggtcaccagaaggaaggc
tatggtctctcctggaattcaaatttgagtggacatctcctaagtgcatctgatgaccat
actgtttgtctgtgggatataaacgcaggaccaaaagaaggcaaaattgtggatgctaaa
gccatctttactggccactcagctgttgtagaggatgtggcctggcacctgctgcacgag
tcattgtttggatctgttgctgatgatcagaaacttatgatatgggacaccaggtccaat
accacctccaagccgagtcacttggtggatgcgcacactgccgaagtcaactgcctctca
ttcaatccctacagcgaatttattctagccaccggctctgcggataagaccgtagcttta
tgggatctgcgtaacttaaaattaaaactccataccttcgaatctcataaagatgaaatt
ttccaggtatgtgacagttttctggtgtctgtatgtcaggaaatgaaatccagggattca
tcagttaagctataccagactcgtgggtccactattgaaaaaaatgtcttgtacgtggtg
ttacatggagatgctcatagggtaagtaaaattggggaagaacaatcagcagaagatgca
gaagatgggcctccagaactcctgtttattcatggaggacacactgctaagatttcagat
tttagctggaaccccaatgagccttgggtcatttgctcagtgtctgaggataacatcatg
cagatatggcaaatggctgaaaatatttacaatgatgaagagtcagatgtcacgacatcc
gaactggagggacaaggatcttaa

>gi568815575r:16745038_16969220|GENSCAN_predicted_peptide_5|104_aa
MATFTYSKEREKPQKREWLQVEHAVDGILEAKISLLQECPGEGSANATNEQGPQHQGKAL
HIGLCGLEGEHEETPGDEEDHKDQCHCSSSSLEIREKIDDEEDS

>gi568815575r:16745038_16969220|GENSCAN_predicted_CDS_5|315_bp
atggcgactttcacatacagcaaagagagggaaaagccccagaaacgtgagtggctgcag
gtggaacatgctgtcgatggaatcctggaagccaagatcagccttctgcaggaatgtccg
ggtgagggttcagcgaatgccaccaatgagcaaggtccccagcaccaaggcaaagccctc
cacattgggctgtgtggacttgaaggtgaacatgaagagacccccggcgatgaggaggat
cacaaggaccagtgtcattgcagctcctccagcttggagatcagagagaagattgatgat
gaagaggacagctaa

>gi568815575r:16745038_16969220|GENSCAN_predicted_peptide_6|127_aa
MEAAAAAAAAAAAAAAAGGGCGSGPPPLLLSEGEQQCYSELFARCAGAAGGGPGSGPPEA
ARVAPGTATAAAGPVADLFRASQLPAETLHQLCFTAKEEGQGPLEPVPAACGACFIYYCY
LYFRDLG

>gi568815575r:16745038_16969220|GENSCAN_predicted_CDS_6|384_bp
atggaggcggcagcggcggcggcggcggcggcagcggcagcggcagcggcgggcgggggc
tgtggctccgggccgccgccgctgctgctgagcgagggcgagcagcagtgctactccgag
ctcttcgcgcgctgtgccggcgccgcgggcgggggccccgggtctgggccccccgaggcc
gccagagtcgcccccggcacggccactgcggccgccggccccgtggctgacctgtttcgg
gcatcgcagctgcccgccgagacgctgcaccagctgtgcttcactgcaaaggaggaagga
caaggccctctggagccagtgccagctgcttgtggggcctgttttatttactactgctat
ctctacttcagagacttgggctag