GENSCAN 1.0	Date run:  3-Nov-116	Time: 21:40:45

Sequence gi568815575r:154059360_154196473 : 137114 bp : 47.97% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2293   2430  138  0  0   85   75   126 0.576  11.14
 1.02 Term +  28393  28479   87  0  0   87   44    45 0.028  -2.34
 1.03 PlyA +  29852  29857    6                               1.05

 2.05 PlyA -  31316  31311    6                               1.05
 2.04 Term -  31822  31772   51  1  0  112   38    59 0.491   0.73
 2.03 Intr -  35130  35019  112  2  1   63   57    25 0.146  -2.72
 2.02 Intr -  38496  38245  252  2  0  104   74   184 0.875  15.15
 2.01 Init -  50061  49997   65  0  2   73   81    62 0.789   4.62
 2.00 Prom -  50683  50644   40                              -7.66

 3.02 PlyA -  51691  51686    6                               1.05
 3.01 Sngl -  52805  52467  339  2  0   40   42   226 0.984   9.23
 3.00 Prom -  59247  59208   40                              -8.46

 4.03 PlyA -  59374  59369    6                               1.05
 4.02 Term -  62964  62848  117  0  0   94   42   100 0.858   4.54
 4.01 Init -  63387  63253  135  0  0   76  110    85 0.951   9.65
 4.00 Prom -  70984  70945   40                              -5.46

 5.00 Prom +  72005  72044   40                              -5.46
 5.01 Init +  72260  72308   49  1  1   86   58     8 0.519  -3.21
 5.02 Intr +  72825  72979  155  1  2   84   41   149 0.862   9.59
 5.03 Intr +  79492  79702  211  0  1   67   33   100 0.452   0.89
 5.04 Intr +  80041  80105   65  2  2   73   87   116 0.914   8.44
 5.05 Intr +  84850  85036  187  0  1   21   83   226 0.755  14.66
 5.06 Intr +  91297  91593  297  2  0  129   91   522 0.931  53.45
 5.07 Intr +  93581  93749  169  0  1  118  110   120 0.994  16.20
 5.08 Intr +  95215  95380  166  1  1   82  103   259 0.998  26.76
 5.09 Intr +  96935  97174  240  1  0  127  115   380 0.999  42.35
 5.10 Term +  99457  99567  111  0  0  116   51   123 0.992   9.96
 5.11 PlyA +  99643  99648    6                               1.05

 6.09 PlyA -  99659  99654    6                              -4.33
 6.08 Term - 100354  99998  357  1  0   93   49   150 0.741   6.11
 6.07 Intr - 101109 100974  136  2  1   55   72   116 0.265   7.27
 6.06 Intr - 109263 109148  116  0  2   70   32    98 0.169   1.65
 6.05 Intr - 109594 109572   23  2  2   85  113    12 0.676   0.66
 6.04 Intr - 110507 110408  100  2  1   80   80    54 0.659   3.48
 6.03 Intr - 114689 114650   40  1  1   98   37    13 0.070  -4.57
 6.02 Intr - 116919 116263  657  2  0   69   66   737 0.043  60.55
 6.01 Init - 117161 117103   59  2  2   65   75    21 0.148  -0.53
 6.00 Prom - 119897 119858   40                              -7.16

 7.00 Prom + 121343 121382   40                              -3.76
 7.01 Init + 123319 123430  112  0  1   93   83   140 0.543  14.38
 7.02 Intr + 128411 128707  297  0  0  129   91   576 0.911  58.85
 7.03 Intr + 130695 130863  169  1  1  118  110   120 0.994  16.20
 7.04 Intr + 132329 132494  166  2  1   82  103   279 0.998  28.76
 7.05 Intr + 134049 134288  240  2  0  127  115   311 0.999  35.45
 7.06 Term + 136571 136681  111  1  0  116   51   123 0.977   9.96
 7.07 PlyA + 136757 136762    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:154059360_154196473|GENSCAN_predicted_peptide_1|74_aa
MKVITGDLMEQLGRAVAAKEQLEKVEEGVETGTGVLLVKENRDARQVLQKSFKIIMEENY
HFYQYKTFIASQPS

>gi568815575r:154059360_154196473|GENSCAN_predicted_CDS_1|225_bp
atgaaggtcatcactggagacctcatggagcagcttggcagagctgtggcagcaaaggaa
caactggagaaggttgaagagggtgtggagacagggactggagtcttgctggtaaaggaa
aacagagatgctagacaggtgttacagaaaagcttcaaaatcatcatggaagaaaattat
catttttaccagtacaaaacttttattgcatcccaaccaagctaa

>gi568815575r:154059360_154196473|GENSCAN_predicted_peptide_2|159_aa
MRRQYTPTRMAKIQNTDNTKCCPAITANDGRARSGAEGGARARRCSSARAGQEGGARRRP
CGVPASAARALPPLGERAVVKAVRKMAAAAAAAPSGGGGGGEEERLALSPLRWKDLVLGA
SIPALSSETTAVPASPCACASFRWFLTPQCEAVVDIHKK

>gi568815575r:154059360_154196473|GENSCAN_predicted_CDS_2|480_bp
atgagacgccagtacacacctactagaatggccaaaatccagaacactgataacaccaaa
tgctgcccggccatcacagccaatgacgggcgggctcgcagcggcgccgagggcggggcg
cgggcgcgcaggtgcagcagcgcgcgggccggccaagagggcggggcgcgacgtcggccg
tgcggggtcccggcgtcggcggcgcgcgcgctccctcctctcggagagagggctgtggta
aaagccgtccggaaaatggccgccgccgccgccgccgcgccgagcggaggaggaggagga
ggcgaggaggagagactagcattatcaccgctgcgatggaaggaccttgtcctcggtgcc
tccataccagccctttccagtgaaactactgctgtcccggcaagcccctgtgcgtgtgca
tcattccggtggtttctgacacctcagtgtgaagctgttgtagacatccataagaaatag

>gi568815575r:154059360_154196473|GENSCAN_predicted_peptide_3|112_aa
MRQKLVERQGEIDESIDKVRDFNTPLSEINRSSRQKIRKDIVELTNTINQPNIIDIYRIL
YPTAAEYMFFSSSRGTFTEMDHILGHKAHLNKCKRIKSHSVFSQTTLELNKK

>gi568815575r:154059360_154196473|GENSCAN_predicted_CDS_3|339_bp
atgaggcaaaaactggtagaacgacaaggagaaattgatgagtccattgacaaagttaga
gacttcaatacccctctgtcagaaattaacagatccagcaggcagaaaatcaggaaggac
atagttgaactcaccaacaccatcaatcaacctaatataattgacatctatagaatactt
tatccaacagcagcagagtacatgttcttctcaagctcccgtgggacattcaccgagatg
gaccacattctgggccataaagcacaccttaacaaatgtaaaagaataaaatcacacagt
gttttctctcagaccacattggaattaaacaagaaatga

>gi568815575r:154059360_154196473|GENSCAN_predicted_peptide_4|83_aa
MLESVKEASPEDMSPSPVTVPGLRVFDGYRVSRCPYRVGQLRNPQYKTQTRMTMIEMSRV
PSSHPPQEPNSSQESIIPGTAVL

>gi568815575r:154059360_154196473|GENSCAN_predicted_CDS_4|252_bp
atgctggagagtgtcaaggaggcctcccctgaggacatgagtccctcccctgtgactgtg
cccggactgagggtctttgatggctacagagtttcacggtgtccctacagagttggtcag
ctcaggaacccccagtacaagactcagacccgcatgaccatgattgagatgtctcgggtg
ccctcgagccaccccccccaggagccaaattcttcccaagagtccattatcccggggaca
gctgtcttgtga

>gi568815575r:154059360_154196473|GENSCAN_predicted_peptide_5|549_aa
MGFHHVDQAGLKLLTSGQLCSSLKQLTRVSWQLSLVLDFSKISPQINNNTDKGLRTTVFG
TWLLGTIQPPGNPVDSTYKSSPESATSYHPTVASQTWSPRFCPGPYSSQTAARGVHPNQL
QIASLFLSKSDKAPHSIQKRQLQLRSTGSPSAAASRDLEQASIKRRDPQVMRQGRLPSGT
GLSIAMAQQWSLQRLAGRHPQDSYEDSTQSSIFTYTNSNSTRGPFEGPNYHIAPRWVYHL
TSVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISIVNQV
SGYFVLGHPMCVLEGYTVSLCGITGLWSLAIISWERWMVVCKPFGNVRFDAKLAIVGIAF
SWIWAAVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAII
MLCYLQVWLAIRAVAKQQKESESTQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAAANP
GYAFHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNCILQLFGKKVDDGSELSSASKTEV
SSVSSVSPA

>gi568815575r:154059360_154196473|GENSCAN_predicted_CDS_5|1650_bp
atggggtttcaccatgttgaccaggctggcctcaaacttctgacctcagggcagctgtgc
tcctctcttaagcaactgacccgtgtctcctggcaactctctttggtactggacttctcc
aagatcagtcctcaaattaataacaacactgacaagggtcttcggaccaccgtgtttggt
acctggctgcttgggaccatccagccaccaggaaatcctgttgactccacttacaaaagc
tctccagagtctgctacctcttaccaccctactgtcgcctcccagacctggtctccccgc
ttctgccctggcccctacagctcgcagacagctgccagaggagtccatccgaatcaactt
cagattgcgtcactttttctttcaaaatccgacaaagctcctcattccattcagaaaagg
cagctgcagctgcggagcacgggatctccatctgcagctgcatcccgggacctagaacag
gccagtataaagcgccgtgaccctcaggtgatgcgccagggccggctgccgtcggggaca
gggctttccatagccatggcccagcagtggagcctccaaaggctcgcaggccgccatccg
caggacagctatgaggacagcacccagtccagcatcttcacctacaccaacagcaactcc
accagaggccccttcgaaggcccgaattaccacatcgctcccagatgggtgtaccacctc
accagtgtctggatgatctttgtggtcactgcatccgtcttcacaaatgggcttgtgctg
gcggccaccatgaagttcaagaagctgcgccacccgctgaactggatcctggtgaacctg
gcggtcgctgacctagcagagaccgtcatcgccagcactatcagcattgtgaaccaggtc
tctggctacttcgtgctgggccaccctatgtgtgtcctggagggctacaccgtctccctg
tgtgggatcacaggtctctggtctctggccatcatttcctgggagagatggatggtggtc
tgcaagccctttggcaatgtgagatttgatgccaagctggccatcgtgggcattgccttc
tcctggatctgggctgctgtgtggacagccccgcccatctttggttggagcaggtactgg
ccccacggcctgaagacttcatgcggcccagacgtgttcagcggcagctcgtaccccggg
gtgcagtcttacatgattgtcctcatggtcacctgctgcatcatcccactcgctatcatc
atgctctgctacctccaagtgtggctggccatccgagcggtggcaaagcagcagaaagag
tctgaatccacccagaaggcagagaaggaagtgacgcgcatggtggtggtgatgatcttt
gcgtactgcgtctgctggggaccctacaccttcttcgcatgctttgctgctgccaaccct
ggttacgccttccaccctttgatggctgccctgccggcctactttgccaaaagtgccact
atctacaaccccgttatctatgtctttatgaaccggcagtttcgaaactgcatcttgcag
cttttcgggaagaaggttgacgatggctctgaactctccagcgcctccaaaacggaggtc
tcatctgtgtcctcggtatcgcctgcatga

>gi568815575r:154059360_154196473|GENSCAN_predicted_peptide_6|495_aa
MSITSSVCVGPILNAQILRVEDGPSGPSSLADGGLAHNLQDSVRHRILYLSEQLRVEKAS
RDGNTVSYLKLVSKADRHQVPHIQQAFEKVNQRASATIAQIEHRLHQCHQQLQELEEGCR
PEGLLLMAESDPANCEPPSEKALLSEPPEPGGEDGPVNLPHASRPFILESRFQSLQQGTC
LETEDVAQQQNLLLQKVKAELEEAKRFHISLQESYHSLKERSLTDLQLLLESLQEEKCRL
LLQILEACTSDPKGETETRTHPEGERRVETEAEADLPWQKPRKPAASSPFELHSTAGWVV
YKERKFNVKALAAGEDLCTASSYGGRQKGKRAQALMEEQVNGRLQGQLNEIYNLKHNLAC
SEERMAYLSYERAKEIWEITETFKSRISKLEMLQQVTQLEAAEHLQSRPPQMLFKFLSPR
LSLATVLLVFVSTLCACPSSLISSRLCTCTMLMLIGLGVLAWQRWRAIPATDWQEWVPSR
CRLYSKDSGPPADGP

>gi568815575r:154059360_154196473|GENSCAN_predicted_CDS_6|1488_bp
atgagcatcacctcctcagtctgtgtcgggcccatcttgaatgcacaaatcttgcgtgtc
gaagacggccccagtggcccttccagcctcgcagatggaggcctagcccacaacttacag
gatagtgtcaggcaccgcatcctctacctctcagagcagctgagagtggagaaggccagt
cgggatggcaacactgtgagctacctcaagctggtatccaaagcagaccggcaccaggtg
ccgcacatccagcaggcctttgagaaggtgaaccagcgcgcctctgccaccatcgcccag
atcgagcacaggctccaccagtgtcaccagcagctccaggagctggaggaaggctgcagg
cccgagggcttactgctgatggcagaaagcgacccagccaactgcgagccacccagtgag
aaggccctgctttcagagccccccgagccaggtggggaagacgggccggtcaacctgcct
catgccagcaggcccttcatcttggagagtcgcttccagagcttacagcaggggacgtgc
ttagagacagaggatgtggcccagcaacaaaacctgctgttgcagaaggtaaaggcagag
ctggaagaagccaagaggttccacatcagcctccaggagtcctatcacagcctaaaggag
aggtctctgactgacctgcagctgttgctggagtcccttcaggaggagaagtgtagactt
ttgctgcaaattctagaagcctgcacttctgacccgaaaggggagacggagacacggaca
cacccagagggagagcgccgtgtggagacagaggctgaggccgacctgccgtggcagaag
ccaaggaagcccgcagcttcatctccttttgaacttcacagtaccgcaggctgggtggtt
tataaagaaaggaagttcaatgtcaaggcgctggcagctggtgaggacctttgtacggca
tcatcctatggcggaaggcagaagggcaagagggcgcaagcattgatggaagaacaggtg
aatggtcgcctgcagggacagctgaatgagatttacaacctcaaacacaatctggcctgc
agcgaagagagaatggcctatctatcctatgagagagccaaggaaatatgggagatcacg
gagaccttcaagagccgaatatccaagctggagatgctacagcaagtcacccaactggag
gcagcggagcacctccaaagccgtcccccgcagatgttgttcaagttcctgagtccgcgc
ctctcactggcaaccgtcctcttggtctttgtctccaccttgtgtgcctgcccctcgtca
ctgatcagctcacgcctgtgcacctgcaccatgctgatgctgatcgggcttggggtcctg
gcctggcagaggtggcgcgccatccctgccacagactggcaggaatgggtcccctccagg
tgtagactgtactccaaggactctgggcctccagcagatggaccttaa

>gi568815575r:154059360_154196473|GENSCAN_predicted_peptide_7|364_aa
MAQQWSLQRLAGRHPQDSYEDSTQSSIFTYTNSNSTRGPFEGPNYHIAPRWVYHLTSVWM
IFVVIASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISVVNQVYGYFV
LGHPMCVLEGYTVSLCGITGLWSLAIISWERWMVVCKPFGNVRFDAKLAIVGIAFSWIWA
AVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCITPLSIIVLCYL
QVWLAIRAVAKQQKESESTQKAEKEVTRMVVVMVLAFCFCWGPYAFFACFAAANPGYPFH
PLMAALPAFFAKSATIYNPVIYVFMNRQFRNCILQLFGKKVDDGSELSSASKTEVSSVSS
VSPA

>gi568815575r:154059360_154196473|GENSCAN_predicted_CDS_7|1095_bp
atggcccagcagtggagcctccaaaggctcgcaggccgccatccgcaggacagctatgag
gacagcacccagtccagcatcttcacctacaccaacagcaactccaccagaggccccttc
gaaggcccgaattaccacatcgctcccagatgggtgtaccacctcaccagtgtctggatg
atctttgtggtcattgcatccgtcttcacaaatgggcttgtgctggcggccaccatgaag
ttcaagaagctgcgccacccgctgaactggatcctggtgaacctggcggtcgctgacctg
gcagagaccgtcatcgccagcactatcagcgttgtgaaccaggtctatggctacttcgtg
ctgggccaccctatgtgtgtcctggagggctacaccgtctccctgtgtgggatcacaggt
ctctggtctctggccatcatttcctgggagagatggatggtggtctgcaagccctttggc
aatgtgagatttgatgccaagctggccatcgtgggcattgccttctcctggatctgggct
gctgtgtggacagccccgcccatctttggttggagcaggtactggccccacggcctgaag
acttcatgcggcccagacgtgttcagcggcagctcgtaccccggggtgcagtcttacatg
attgtcctcatggtcacctgctgcatcaccccactcagcatcatcgtgctctgctacctc
caagtgtggctggccatccgagcggtggcaaagcagcagaaagagtctgaatccacccag
aaggcagagaaggaagtgacgcgcatggtggtggtgatggtcctggcattctgcttctgc
tggggaccatacgccttcttcgcatgctttgctgctgccaaccctggctaccccttccac
cctttgatggctgccctgccggccttctttgccaaaagtgccactatctacaaccccgtt
atctatgtctttatgaaccggcagtttcgaaactgcatcttgcagcttttcgggaagaag
gttgacgatggctctgaactctccagcgcctccaaaacggaggtctcatctgtgtcctcg
gtatcgcctgcatga