GENSCAN 1.0	Date run:  4-Nov-116	Time: 21:21:34

Sequence gi568815575r:1365482_1566558 : 201077 bp : 50.85% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  13178  13283  106  0  1  107  105   136 0.992  16.47
 1.02 Intr +  15542  15623   82  2  1   49   84    90 0.859   4.34
 1.03 Term +  16910  16984   75  1  0  164   53    50 0.945   6.94
 1.04 PlyA +  19169  19174    6                               1.05

 2.05 PlyA -  20693  20688    6                               1.05
 2.04 Term -  21278  21121  158  0  2  116   49   322 0.851  29.20
 2.03 Intr -  21938  21798  141  0  0   48   63   298 0.994  23.62
 2.02 Intr -  24246  23760  487  0  1  121   83  1068 0.970 102.19
 2.01 Init -  26528  26418  111  2  0  120   75   295 0.993  31.61
 2.00 Prom -  28114  28075   40                              -4.06

 3.21 PlyA -  28314  28309    6                               1.05
 3.20 Term -  38008  37788  221  2  2  106   48   361 0.921  31.10
 3.19 Intr -  47439  47251  189  1  0   56   94   175 0.500  14.46
 3.18 Intr -  52635  52492  144  1  0   79   99   209 0.999  21.35
 3.17 Intr -  52956  52831  126  1  0   43   62    86 0.811   2.15
 3.16 Intr -  53633  53501  133  2  1   82   90   215 0.975  21.32
 3.15 Intr -  56361  56177  185  1  2   84   69   223 0.770  19.51
 3.14 Intr -  60206  60044  163  2  1   99   56   223 0.998  19.75
 3.13 Intr -  62640  62253  388  2  1  109   77   528 0.999  48.59
 3.12 Intr -  66896  66788  109  0  1  110   84   239 0.999  25.04
 3.11 Intr -  69602  69541   62  1  2  105   86    34 0.915   3.28
 3.10 Intr -  70277  70213   65  2  2  118  119    98 0.838  13.42
 3.09 Intr -  73663  73616   48  1  0   72   89    92 0.294   6.58
 3.08 Intr -  76836  76726  111  0  0  134   22   201 0.269  18.68
 3.07 Intr -  77274  77075  200  1  2   79   65    68 0.766   2.67
 3.06 Intr -  77724  77529  196  0  1   52   66    92 0.017   2.39
 3.05 Intr -  87425  87267  159  2  0   88   64   187 0.873  16.48
 3.04 Intr -  99462  99347  116  1  2   86    8    70 0.797  -1.03
 3.03 Intr - 101101 100066 1036  1  1  136   78  1715 0.942 165.40
 3.02 Intr - 103189 103021  169  0  1   94   76    50 0.642   4.35
 3.01 Init - 116580 116471  110  0  2   38   26   108 0.250  -0.71
 3.00 Prom - 118602 118563   40                              -0.76

 4.08 PlyA - 120034 120029    6                               1.05
 4.07 Term - 121794 121695  100  2  1  112   55    48 0.008   1.50
 4.06 Intr - 128330 128245   86  2  2   74   44    97 0.001   2.52
 4.05 Intr - 152073 151958  116  1  2   50   53    78 0.074   0.67
 4.04 Intr - 164070 163937  134  2  2   79   76    34 0.201   1.59
 4.03 Intr - 171667 171440  228  0  0    8   99   199 0.169   9.98
 4.02 Intr - 177124 176999  126  0  0   63   12   110 0.021   0.69
 4.01 Init - 181802 181411  392  2  2  106   -8   168 0.084   3.26

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:1365482_1566558|GENSCAN_predicted_peptide_1|87_aa
XCDQEEGANTRAWRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQN
DKLVVWEAGKAGLEECLVTEVQVVQKT

>gi568815575r:1365482_1566558|GENSCAN_predicted_CDS_1|264_bp
nagtgcgaccaggaggagggcgcaaacacacgtgcctggcggacgtcgctgctgatcgcg
ctggggacgctgctggccctggtctgtgtcttcgtgatctgcagaaggtatctggtgatg
cagagactctttccccgcatccctcacatgaaagaccccatcggtgacagcttccaaaac
gacaagctggtggtctgggaggcgggcaaagccggcctggaggagtgtctggtgactgaa
gtacaggtcgtgcagaaaacttga

>gi568815575r:1365482_1566558|GENSCAN_predicted_peptide_2|298_aa
MTEQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAADKQYKGIVDCIVR
IPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQFWRYFAGNLASG
GAAGATSLCFVYPLDFARTRLAADVGKSGTEREFRGLGDCLVKITKSDGIRGLYQGFSVS
VQGIIIYRAAYFGVYDTAKGMLPDPKNTHIVVSWMIAQTVTAVAGVVSYPFDTVRRRMMM
QSGRKGADIMYTGTVDCWRKIFRDEGGKAFFKGAWSNVLRGMGGAFVLVLYDELKKVI

>gi568815575r:1365482_1566558|GENSCAN_predicted_CDS_2|897_bp
atgacggaacaggccatctccttcgccaaagacttcttggccggaggcatcgccgccgcc
atctccaagacggccgtggctccgatcgagcgggtcaagctgctgctgcaggtccagcac
gccagcaagcagatcgccgccgacaagcagtacaagggcatcgtggactgcattgtccgc
atccccaaggagcagggcgtgctgtccttctggaggggcaaccttgccaacgtcattcgc
tacttccccactcaagccctcaacttcgccttcaaggataagtacaagcagatcttcctg
gggggcgtggacaagcacacgcagttctggaggtactttgcgggcaacctggcctccggc
ggtgcggccggcgcgacctccctctgcttcgtgtacccgctggatttcgccagaacccgc
ctggcagcggacgtgggaaagtcaggcacagagcgcgagttccgaggcctgggagactgc
ctggtgaagatcaccaagtccgacggcatccggggcctgtaccagggcttcagtgtctcc
gtgcagggcatcatcatctaccgggcggcctacttcggcgtgtacgatacggccaagggc
atgctccccgaccccaagaacacgcacatcgtggtgagctggatgatcgcgcagaccgtg
acggccgtggccggcgtggtgtcctaccccttcgacacggtgcggcggcgcatgatgatg
cagtccgggcgcaaaggagctgacatcatgtacacgggcaccgtcgactgttggaggaag
atcttcagagatgaggggggcaaggccttcttcaagggtgcgtggtccaacgtcctgcgg
ggcatggggggcgccttcgtgctggtcctgtacgacgagctcaagaaggtgatctaa

>gi568815575r:1365482_1566558|GENSCAN_predicted_peptide_3|1309_aa
MRYRNQRNAAAAFAEDADQNLHGASAEDSMQISLGKRQFSAQKFLDSHLCRPDTAKNNRC
ADFLKFPSCPLSPGGAQTASLCLLCQGSWHQLESPGEDPSRMQVPNSTGPDNATLQMLRN
PAIAVALPVVYSLVAAVSIPGNLFSLWVLCRRMGPRSPSVIFMINLSVTDLMLASVLPFQ
IYYHCNRHHWVFGVLLCNVVTVAFYANMYSSILTMTCISVERFLGVLYPLSSKRWRRRRY
AVAACAGTWLLLLTALSPLARTDLTYPVHALGIITCFDVLKWTMLPSVAMWAVFLFTIFI
LLFLIPFVITVACYTATILKLLRTEEAHGREQRRRAVGLAAVVLLAFVTCFAPNNFVLLA
HIVSRLFYGKSYYHVYKLTLCLSCLNNCLDPFVYYFASREFQLRLREYLGCRRVPRDTLD
TRRESLFSARTTSVRSEAGVLVSVARCTPKFLFISLRGTVVAVVGILLSEERLGLLQPRC
AHRGLRAQKCGRPAPGVDAMVLCPVIGKLLHKRVVLASASPRRQEILSNAMAVCVHDGGV
CPRWRCVSKMAACVHDGGVCPRRRCVSQMAVCVHDDGVCPRWWYASKMVVSLQDGAIIAG
VFPEFPVGRLGFVLCPNLQVSGNPRTLLARGFKARVNTSLLASLFLASSFANLFPREPRR
PLGLRFEVVPSKFKEKLDKASFATPYGYAMETAKQKALEKDLRAPDVVIGADTIVTVGGL
ILEKPVDKQDAYRMLSRLSGREHSVFTGVAIVHCSSKDHQLDTRVSEFYEETKVKFSELS
EELLWEYVHSGEPMDKAGGYGIQALGGMLVESVHGDFLNVVGFPLNHFCKQLVKLYYPPR
PEDLRRSVKHDSIPAADTFEDLSDVEGGGSEPTQRDAGSRDEKAEAGEAGQATAEAECHR
TRETLPPFPTRLLELIEGFMLSKGLLTACKLKVFDLLKDEAPQKAADIASKVDASACGME
RLLDICAAMGLLEKTEQGYSNTETANVYLASDGEYSLHGFIMHNNDLTWNLFTYLEFAIR
EGTNQHHRALGKKAEDLFQDAYYQSPETRLRFMRAMHGMTKLTACQVATAFNLSRFSSAC
DVGGLCPLHVAQSGCCSTGHCVYIPTAGRRREYSPPPLGWKDFPAGCTGALARELAREYP
RMQVTVFDLPDIIELAAHFQPPGPQAVQIHFAAGSVRGGLLLPYLTDVSRFVFKPGDFFR
DPLPSAELYVLCRILHDWPDDKVHKLLSRVAESCKPGAGLLLVETLLDEEKRVAQRALMQ
SLNMLVQTEGKERSLGEYQCLLELHGFHQVQVVHLGGVLDAILATKVAP

>gi568815575r:1365482_1566558|GENSCAN_predicted_CDS_3|3930_bp
atgagatacagaaatcagagaaacgcggccgctgcctttgcagaagacgcagatcaaaat
ctccacggggcgtctgcggaggacagcatgcaaatctcgctgggcaaacgacaattcagt
gcccagaaatttctggacagccacctctgcaggccagacaccgccaagaacaaccgttgt
gctgattttctaaaatttccatcctgcccgctgagccccggcggggcccaaaccgcaagc
ctgtgcctcctgtgtcagggcagctggcatcagttagagagcccgggcgaggacccctcc
aggatgcaggtcccgaacagcaccggcccggacaacgcgacgctgcagatgctgcggaac
ccggcgatcgcggtggccctgcccgtggtgtactcgctggtggcggcggtcagcatcccg
ggcaacctcttctctctgtgggtgctgtgccggcgcatggggcccagatccccgtcggtc
atcttcatgatcaacctgagcgtcacggacctgatgctggccagcgtgttgcctttccaa
atctactaccattgcaaccgccaccactgggtattcggggtgctgctttgcaacgtggtg
accgtggccttttacgcaaacatgtattccagcatcctcaccatgacctgtatcagcgtg
gagcgcttcctgggggtcctgtacccgctcagctccaagcgctggcgccgccgtcgttac
gcggtggccgcgtgtgcagggacctggctgctgctcctgaccgccctgtccccgctggcg
cgcaccgatctcacctacccggtgcacgccctgggcatcatcacctgcttcgacgtcctc
aagtggacgatgctccccagcgtggccatgtgggccgtgttcctcttcaccatcttcatc
ctgctgttcctcatcccgttcgtgatcaccgtggcttgttacacggccaccatcctcaag
ctgttgcgcacggaggaggcgcacggccgggagcagcggaggcgcgcggtgggcctggcc
gcggtggtcttgctggcctttgtcacctgcttcgcccccaacaacttcgtgctcctggcg
cacatcgtgagccgcctgttctacggcaagagctactaccacgtgtacaagctcacgctg
tgtctcagctgcctcaacaactgtctggacccgtttgtttattactttgcgtcccgggaa
ttccagctgcgcctgcgggaatatttgggctgccgccgggtgcccagagacaccctggac
acgcgccgcgagagcctcttctccgccaggaccacgtccgtgcgctccgaggccggggtt
ctggtctccgtagcccggtgcacgccgaaatttctgtttatttcactcaggggcactgtg
gttgctgtggttggaattcttctttcagaggagcgcctggggctcctgcaaccgcgctgc
gcgcaccgcgggctccgggctcagaagtgcggacgcccggctcccggcgtggacgccatg
gtgctgtgcccggtgattgggaagctgctgcacaagcgcgtggtgctggccagcgcctcc
ccacgccgtcaggagatcctcagcaacgcgatggcagtgtgtgtccacgatggcggtgtg
tgtccacgatggcggtgtgtgtccaagatggcggcgtgtgtccacgacggcggtgtgtgt
ccacgacgacggtgtgtgtcccagatggcagtgtgtgtccacgacgacggtgtgtgtcca
cgatggtggtatgcgtccaagatggtggtgtctctccaagatggcgccatcattgctggc
gtttttcctgaatttcctgtgggcaggttgggttttgtactctgccccaaccttcaggtc
tctgggaatcctcggacactgttggctcgtgggttcaaggcccgagtcaatacctccctg
ctggcctctttgttcctggcttcttcctttgccaatctcttccctcgagagccaagaagg
cccctgggtctcaggtttgaggtggtcccctccaagtttaaagagaagctggacaaagcc
tccttcgctactccgtatgggtacgccatggagaccgccaagcagaaggccctggagaaa
gacctgcgggcccccgacgtggtcattggagcggacacgatcgtgacagtcggggggctg
attctggagaagccggtggacaagcaggacgcctacaggatgctgtcccggttgagtggg
agagaacacagcgtgttcacaggtgtcgcgatcgtccactgctccagcaaagaccatcag
ctggacaccagggtctcggaattctacgaggaaacgaaggtgaagttctcggagctgtcc
gaggagctgctctgggaatacgtccacagcggggagcccatggacaaagctggcggctac
gggatccaggccctgggcggcatgctggtggagtccgtacacggggactttctgaacgtg
gtgggattcccgctgaaccacttctgcaagcagctggtgaagctctactacccgccccgt
ccggaggacctgcggcggagtgtcaagcacgactccatcccggccgcggacaccttcgaa
gacctcagtgacgtggaggggggcggctcggagcccactcagagggacgcgggcagccgc
gatgagaaggccgaggcgggagaggcgggacaggccacggcagaggctgagtgtcacagg
actcgggagaccctgcctccgttcccgacacgcctcctggagctgattgagggctttatg
ctatccaagggcctgctcaccgcttgcaaactgaaggtgttcgatttgttaaaagatgaa
gcaccccagaaggctgcggatattgccagcaaagtggacgcctctgcgtgtggaatggag
aggcttctggacatctgtgctgccatggggctcctggagaagacagagcaaggttacagt
aacacagagacagcgaacgtctacctggcatcggatggcgaatactctctgcacggcttc
atcatgcacaataatgacctcacatggaacctctttacatacctggagtttgccatccga
gagggaacaaaccagcaccacagggcgttggggaagaaggcggaagatctgttccaggat
gcgtactaccagagcccggagacgcggctgaggttcatgcgggccatgcacggcatgacg
aagctgactgcgtgccaggtggccacggccttcaatctgtcccgcttctcctccgcctgc
gacgtgggaggtctgtgccccctacacgtggcccagagtggctgctgtagcaccggccat
tgtgtctacatccccacggcaggaaggagaagggagtacagccctccacccctgggctgg
aaggatttccctgcaggctgcacgggtgcactggcccgagagctggcccgtgagtaccct
cgtatgcaggtgactgtgtttgacctcccagacattatcgagctggccgcccacttccaa
ccccccggaccgcaggcagtgcagatccacttcgcagcaggatctgtccggggaggactg
cttcttccatacctgacggacgtatctcgttttgtctttaaaccaggtgactttttcagg
gaccccctccccagcgctgagctgtacgtcctgtgccggatcctgcatgactggccagac
gacaaagtccacaagttactcagcagggtcgccgagagctgcaagccaggggccggcctg
ctgctggtggagacgctcctggatgaggagaagagggtggcgcagcgcgccctgatgcag
tcactgaacatgctggtgcagactgaaggcaaggagcggagcctgggcgagtatcagtgc
ttgctggagctgcacggcttccaccaggtgcaggtggtgcacttggggggtgtcctggat
gccatcttggccaccaaagtggccccctga

>gi568815575r:1365482_1566558|GENSCAN_predicted_peptide_4|393_aa
MAWPPPQPLAALSLCPLGVHIGRAAPNSQELTGQQQALQDPLEAGSLVSQGRRGGLARAA
ISVPLFLQALSVFRSSLNIRPSALPGHEHILFLVSFRETAPNNLTAVTKPTGVQLASSDQ
LRSAQTPSNTIKLKKVSKYSYNLHLFEQHLGREKITAFAVKSPFSKDSLPNATEAAAFAR
LLDRWNWKGSRLPPTNTFSSTLSDHGLQAGGWPPESRALRHGRRLKRCILLPGDPLSSHL
LLLPLLLHRALSIFPGSTHHAPGVHPPVVTPQTAQDIDKHPHWNRISRNSEPQEPSDDFL
NTFQFILRLWRVEQQSKAMYWGLPTRHTEADKTLPQEKSKIVLSVLTEIPSLQANCSFDE
GQLGRKLCVAGKDKEEIETMLDLRTWTPFTVAP

>gi568815575r:1365482_1566558|GENSCAN_predicted_CDS_4|1182_bp
atggcttggcccccaccgcagcccctggccgccttgtctctctgtcccttgggtgtgcac
attgggagggcagctcctaacagccaggaacttacgggtcaacaacaggctttacaggat
cccctggaagcaggcagcctcgtttcccagggcagacgtgggggcctggcccgggctgct
atttctgtccctctcttcctccaggccctgtcggttttccgttcctctctcaacatcagg
ccctcagctctcccgggacatgaacacatcctgttcctggtttccttcagagaaacagcc
ccaaacaaccttacggcggtcactaaacccactggggttcagctggcatcctcggatcag
ctcagatcggctcagacaccttcaaacaccatcaagctgaagaaggtgtccaaatattcc
tacaacctccacttatttgagcaacacttgggcagagagaagatcacagctttcgccgtg
aagagcccattttcaaaggactctcttccaaatgccaccgaagcggccgcctttgcaagg
ttgctggacagatggaactggaagggcagccgtctgccgcccacgaacaccttctcaagc
actttgagtgaccacggcttgcaagctggtggctggccccccgagtcccgggctctgagg
cacggccgtcgacttaagcgttgcatcctgttacctggagaccctctgagctctcacctg
ctacttctgccgctgcttctgcacagggcactgagcatcttcccaggctccacccaccac
gccccaggagtacaccctccagttgtgacaccccaaactgcccaagatatagacaagcat
ccccactggaacagaatctcccgcaattctgaaccacaggagccctcagatgacttcctt
aataccttccagttcatcctgagactctggagggtggaacagcagtctaaggccatgtac
tggggactgcccacaaggcacacagaggcggacaagacgttgccgcaagaaaagagcaaa
atcgtcttgtccgttttaacggagattcccagtttgcaagccaattgttcctttgacgag
gggcagctaggaaggaagctctgtgtggccgggaaagacaaggaggaaattgaaacaatg
ctggacttgagaacttggacgcctttcactgtggctccctga