GENSCAN 1.0	Date run:  7-Nov-116	Time: 21:23:11

Sequence gi568815575r:119686687_119890012 : 203326 bp : 46.09% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   6311   6537  227  1  2   65   56   186 0.310   9.20
 1.02 Term +   8917   8980   64  1  1   97   42    92 0.403   2.86
 1.03 PlyA +   9353   9358    6                               1.05

 2.00 Prom +  24316  24355   40                              -3.66
 2.01 Init +  54458  54464    7  1  1   99   83     0 0.380   1.69
 2.02 Intr +  64050  64325  276  1  0   75   68   144 0.593   8.59
 2.03 Term +  64418  64548  131  0  2   37   55    89 0.640  -1.16
 2.04 PlyA +  67267  67272    6                               1.05

 3.00 Prom +  69003  69042   40                              -7.06
 3.01 Sngl +  71982  72929  948  2  0   91   48  1042 0.983  95.08
 3.02 PlyA +  74879  74884    6                               1.05

 4.04 PlyA -  75291  75286    6                               1.05
 4.03 Term -  78940  78827  114  1  0   58   54    77 0.218  -0.13
 4.02 Intr -  83160  83112   49  2  1   60  113    28 0.036   1.18
 4.01 Init - 105342 105281   62  0  2   80   51   122 0.251   6.44
 4.00 Prom - 112307 112268   40                              -6.16

 5.00 Prom + 119325 119364   40                              -2.46
 5.01 Init + 119449 119581  133  0  1   78   47    46 0.537  -0.20
 5.02 Term + 120818 120906   89  0  2   62   39   128 0.634   3.12
 5.03 PlyA + 123277 123282    6                               1.05

 6.11 PlyA - 126867 126862    6                               1.05
 6.10 Term - 136357 136267   91  0  1   84   43   130 0.692   5.29
 6.09 Intr - 147963 147873   91  1  1    6   69    87 0.079  -2.35
 6.08 Intr - 148341 148227  115  0  1   87   12   141 0.124   6.42
 6.07 Intr - 151365 151071  295  2  1   78   48   408 0.989  32.81
 6.06 Intr - 151841 151681  161  2  2   41   78   198 0.999  12.89
 6.05 Intr - 153998 153960   39  2  0  112   73     9 0.536   0.22
 6.04 Intr - 154572 154390  183  0  0   70   70   121 0.985   8.48
 6.03 Intr - 155092 155049   44  2  2   53   99    35 0.968  -0.94
 6.02 Intr - 164915 164809  107  1  2   81  113    39 0.920   5.56
 6.01 Init - 166242 165893  350  0  2   93   60   202 0.413  14.57
 6.00 Prom - 176926 176887   40                              -1.06

 7.02 PlyA - 178573 178568    6                               1.05
 7.01 Sngl - 184927 183896 1032  1  0   57   39  1260 0.996 115.11

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  35997  36061   65  1  2  116   47    42 0.875   0.95
S.002 Term - 148341 148192  150  0  0   87   44   139 0.865   7.31


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:119686687_119890012|GENSCAN_predicted_peptide_1|96_aa
MWRRRPGLLDPHQALGPGPGTQALHLPPGELYRSLPSLLRPPGLPRVPPQRELLHRKQRS
SSDKEKVLHFGRDQVRDYQNLTASSSSKTLNLEDLN

>gi568815575r:119686687_119890012|GENSCAN_predicted_CDS_1|291_bp
atgtggcggcggcggccaggtctccttgaccctcaccaggccctcggccccggccctggc
acccaagctctgcacttaccacctggcgagctatatcggtcgctgccatcgctcctgcgt
ccgccagggctgccacgggtgccgccgcaacgggagctactgcacaggaaacagaggagc
tcctccgacaaagagaaagtgttacacttcgggcgcgaccaagtccgagactaccagaac
ctcactgcgtcctcctcctccaaaacgctgaacctcgaagacctgaactaa

>gi568815575r:119686687_119890012|GENSCAN_predicted_peptide_2|137_aa
MKHSGAQLASPSGSRTGAAGGAACQSRAVCLHFSALGRSMGLGAVEQGVVLVGEAGAAQE
PMEWVGGSGMAGCRSRALPRGKAAKAQREIQHSAGPAGCSECGARQAHAHPELQLARKRC
AQPRFLLAPLPPHLPAS

>gi568815575r:119686687_119890012|GENSCAN_predicted_CDS_2|414_bp
atgaaacactcaggagcccagctggcttcacctagtggatcccgcactggggccgcaggt
ggagctgcctgccagtcccgtgccgtgtgcttgcacttctcagcccttgggcggtcgatg
ggactgggcgccgtggagcagggggtggtgctcgtcggggaggctggggccgcacaggag
cccatggagtgggtgggaggctcaggcatggcgggctgcaggtcccgagccctgccccgc
gggaaggcagctaaggcccagcgagaaatccagcacagcgccgggccggccggctgctcc
gagtgcggggcccgccaagcccacgcccacccagaactccagctggcccgcaagcgctgc
gcgcagccccggttcctgctcgcgcctctccctccacacctccctgcaagctga

>gi568815575r:119686687_119890012|GENSCAN_predicted_peptide_3|315_aa
MAQLGGAANRAPTASLAPTSQSLRCAPQPRPSRADTGSLGRYWGKAAAAASREHPFPGTL
MHSAAGSGRRRGALRELLGLQRAAPAGWLSEERAEELGGPSGPGSSRLCLEPREHAWILA
AAEGRYEVLRELLEAEPELLLRGDPITGYSVLHWLAKHGRHEELILVHDFALRRGLRLDV
SAPGSGGLTPLHLAALQGHDMVIKVLVGALGADATRRDHSGHRACHYLRPDAPWRLRELS
GAEEWEMESGSGCTNLNNNSSGTTAWRAASAVGATAVETSRRVAASRTKAKDTAGSRVAQ
MHSLFRHLFPSFQDR

>gi568815575r:119686687_119890012|GENSCAN_predicted_CDS_3|948_bp
atggcccagctcggaggggccgcgaaccgggcacccacggcctctctcgcgccgacctcg
cagagcctgcggtgcgccccgcagccccgcccctcgagagcggacactggtagcctgggc
aggtactggggcaaagccgcagccgccgcctcccgggagcaccccttcccaggcacgctg
atgcactctgcagcgggctcagggcgccggcggggagcgctgcgggaactgctggggctg
cagcgggcggctcctgcggggtggctgtcggaggagcgcgccgaggagctgggcgggccg
agtgggccgggcagcagcaggctgtgcctggaaccgcgggagcacgcgtggattctggca
gccgccgagggccgctatgaggtgctgcgggagctgctggaggctgagccggagctgctg
ctgcggggcgacccgatcaccggctactcggttctgcactggctggccaagcacgggcgc
cacgaggagctcattctggtacacgatttcgccctacgccgggggctgaggctcgacgtg
agcgccccaggcagcggcggcctcacgcccctccacctggcggcccttcagggccacgac
atggtcatcaaggtgctggtgggcgccctgggtgctgacgctacgcgccgcgaccacagc
ggccaccgggcctgccactacctgcggcccgacgcgccttggaggttgcgggagctgtcg
ggagccgaggaatgggagatggagagcggcagcgggtgcaccaacctgaacaacaacagc
agtggcaccactgcgtggagggccgcgagcgcagtgggcgcgacggctgtggagacaagc
aggagagtggcagcgtcgcggaccaaggcgaaggacaccgcgggcagccgggtggcgcaa
atgcatagccttttccgccatctgttcccctcattccaggaccgttga

>gi568815575r:119686687_119890012|GENSCAN_predicted_peptide_4|74_aa
MALTLRLPSSDPAFRVPGARSGFVVSLTSGMKLHTLTVEVAKPSVTLQFCKSADLAPCGS
PKAYGFGSSSQSST

>gi568815575r:119686687_119890012|GENSCAN_predicted_CDS_4|225_bp
atggcacttactctccgcctgccgagctccgacccggcgttccgagtccccggcgcccgg
agtgggttcgtggtctcactgacttcaggaatgaagctgcatacgctcacggtggaagtt
gccaagccttcagtcactcttcaattttgcaagtctgcagacttagcaccatgtggaagc
cccaaggcttatggctttgggagcagcagccagagcagtacctga

>gi568815575r:119686687_119890012|GENSCAN_predicted_peptide_5|73_aa
MEYYAAIKNDEFMSFVGTWMKLEIIILSKLLQEQKTKHRIFSLIDWCCHLATRIDLGFEL
LDGKASSLDDPEV

>gi568815575r:119686687_119890012|GENSCAN_predicted_CDS_5|222_bp
atggaatactatgcagccataaaaaatgatgagttcatgtcctttgtagggacatggatg
aaactggaaatcatcattctcagtaaactattgcaagaacaaaaaaccaaacaccgcata
ttctcactcatagattggtgctgccatcttgccaccagaatcgacctgggcttcgagctc
ctggatggtaaagcttcatccctggatgatcctgaagtataa

>gi568815575r:119686687_119890012|GENSCAN_predicted_peptide_6|491_aa
MKEEKEHRPKEKRVTLLTPAGATGSGGGTSGDSSKGEDKQDRNKEKKEALSKVPGRPLAR
ERAGRVRSAGRMAGNGAAPFLSQVLLLSLRLNGSRIILVHPFTRNGESPSRPNPGWGLYP
HMYARAYINFKNQEDIILFRDRFDGYVFLDNKAKKTTPLLSFLKNKQRMREEKREERRRR
EIERKRQREEERRKWKEEEKRKRKDIEKLKKIDRIPERDKLKDEPKIKVHRFLLQAVNQK
NLLKKPEKGDEKELDKREKAKKLDKENLSDERASGQSCTLPKRSDSELKDEKPKRPEDES
GRDYREREREYERDQERILRERERLKRQEEERRRQKERYEKEKTFKRKEEEMKKEKDTLR
DKGKKAESTESIGSSEKTEKKEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPPDDSTKS
GDSAAERKQESVSEKGDGKDMHCNLQGELSSEDFITYDTREKTVHGCSVTIEELEAEVDS
GTLMTSLEIQQ

>gi568815575r:119686687_119890012|GENSCAN_predicted_CDS_6|1476_bp
atgaaggaagagaaggagcacaggcctaaggagaagcgagtaaccctgttaacccccgcc
ggggccacaggcagcggtggtgggacctcgggggacagctccaagggggaagataagcag
gatcgcaacaaggagaagaaagaagcgctgagcaaggtgcccggtcggccgctggcccgg
gagagggcgggacgagtccgcagcgcggggaggatggctgggaatggggctgcccccttt
ctttctcaggttctccttctatctcttcgcctgaatggaagtcgcatcatcctggttcat
ccattcacccgaaatggggagagcccctcccggccaaatcctgggtggggtttgtatcct
catatgtatgccagagcatacatcaactttaaaaaccaagaggacattattttgttcagg
gatcgctttgatggttatgtattccttgacaataaagctaaaaagacaaccccacttttg
agcttcctgaaaaacaagcagagaatgagagaagaaaagagagaagaaaggaggaggaga
gaaatagaaagaaaaagacaaagagaagaagagaggaggaaatggaaagaagaagagaaa
cgaaaaaggaaagatatagaaaagctaaagaagatagacagaattccagaaagggacaaa
ttaaaggatgaaccaaagattaaggtacacaggtttctgttacaagctgtgaatcagaaa
aatctgctcaagaagccagaaaaaggagatgaaaaagaattggacaaaagagaaaaagcc
aagaaattggacaaagagaatctcagtgatgaaagagccagtgggcaaagttgtacattg
cccaagcgttctgatagcgaacttaaagatgaaaaaccaaagagacctgaagatgagagc
ggcagagactatagggagagggaacgggaatatgaacgagatcaggagcgcatacttcga
gaaagagagaggctgaagcggcaagaagaagagcgccgtaggcagaaggagcgctatgag
aaagagaagacttttaagagaaaagaagaagaaatgaaaaaagagaaagacacacttcgg
gataaaggaaagaaggctgaaagtacagaatcaataggcagctcagaaaaaactgaaaag
aaagaagaagtggtcaagagagatcgaataagaaacaaggatcgtccagcgatgcagctt
taccaaccaggagctcgaagccgaaatcgactctgtccccctgatgacagcaccaagtct
ggagattcagcagcagaaaggaagcaggaaagtgtgtcagaaaaaggtgacggcaaggac
atgcattgcaatttgcagggggaattgtcaagtgaggacttcatcacatatgacacgaga
gaaaagactgtccatggatgcagtgttaccatcgaggagctcgaggccgaggtcgactct
ggcaccctgatgacaagtctggagattcagcagtag

>gi568815575r:119686687_119890012|GENSCAN_predicted_peptide_7|343_aa
MAEQLSPGKAVDQVCTFLFKKPGRKGAAGRRKRPACDPEPGESGSSSDEGCTVVRPEKKR
VTHNPMIQKTRDSGKQKAAYGDLSSEEEEENEPESLGVVYKSTRSAKPVGPEDMGATAVY
ELDTEKERDAQAIFERSQKIQEELRGKEDDKIYRGINNYQKYMKPKDTSMGNASSGMVRK
GPIRAPEHLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKHGWQIERELDEGR
YGVYEDENYEVGSDDEEIPFKCFICRQSFQNPVVTKCRHYFCESCALQHFRTTPRCYVCD
QQTNGVFNPAKELIAKLEKHRATGEGGASDLPEDPDEDAIPIT

>gi568815575r:119686687_119890012|GENSCAN_predicted_CDS_7|1032_bp
atggcagagcagctttctccaggaaaggcggtggatcaggtgtgcaccttccttttcaaa
aagcctgggcggaaaggggctgctggacgcagaaagcgcccggcctgcgacccagagccc
ggagaaagcggcagcagtagcgacgaaggctgcactgtggttcgaccggaaaagaagcgg
gtgacccacaatccaatgatacagaagacccgtgacagtggtaaacagaaggcggcttac
ggcgacttgagcagcgaagaggaagaggaaaatgagcccgagagtctcggcgtggtttat
aaatccacccgttcggcgaaacccgtgggaccagaggatatgggagcgacagctgtctat
gagctggacacagagaaagagcgcgatgcacaagccatctttgagcgcagccagaagatc
caggaggagctgaggggcaaggaggatgacaagatctatcggggaatcaacaattatcag
aaatacatgaagcccaaggatacgtctatgggcaatgcctcttccgggatggtgaggaag
ggccccatccgagcgcccgagcatctacgtgccaccgtgcgctgggattaccagcccgac
atctgtaaggactacaaagagactggcttctgcggcttcggagacagctgcaaattcctc
catgaccgttcagattacaagcatgggtggcagatcgaacgtgagcttgatgagggtcgc
tatggtgtctatgaggatgaaaactatgaagtgggaagcgatgatgaggaaataccattc
aagtgtttcatctgtcgccagagcttccaaaacccagttgtcaccaagtgcaggcattat
ttctgcgagagctgtgcactgcagcatttccgcaccaccccgcgctgctatgtctgtgac
cagcagaccaatggcgtcttcaatccagcgaaagaattgattgctaaactagagaagcat
cgagctacaggagagggtggtgcttccgacttgccagaagaccccgatgaggatgcaatt
cccattacttag