GENSCAN 1.0	Date run:  4-Nov-116	Time: 19:09:06

Sequence gi568815575f:89822086_90022808 : 200723 bp : 36.19% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2767   2868  102  0  0   81   76    45 0.283   2.89
 1.02 Intr +  17235  17323   89  2  2   32   92   112 0.167   3.85
 1.03 Intr +  51155  51534  380  2  2   44   81   203 0.025   8.88
 1.04 Intr +  51645  51909  265  1  1   67   89   118 0.202   5.45
 1.05 Term +  81041  81437  397  2  1   35   40   195 0.188   2.96
 1.06 PlyA +  81465  81470    6                               1.05

 2.00 Prom +  94434  94473   40                              -4.85
 2.01 Sngl + 100001 100726  726  1  0   62   38   969 0.977  83.27
 2.02 PlyA + 102109 102114    6                               1.05

 3.00 Prom + 102926 102965   40                              -4.65
 3.01 Init + 104160 104262  103  2  1   60   68   113 0.936   5.38
 3.02 Intr + 104398 104589  192  2  0   19   90   215 0.931  13.34
 3.03 Term + 104852 105024  173  0  2   41   49   109 0.956  -0.69
 3.04 PlyA + 105073 105078    6                               1.05

 4.02 PlyA - 105347 105342    6                               1.05
 4.01 Sngl - 113455 112514  942  1  0   83   41   302 0.839  21.27
 4.00 Prom - 113737 113698   40                             -12.52

 5.03 PlyA - 113975 113970    6                               1.05
 5.02 Term - 114562 114231  332  2  2    0   36   238 0.846   3.63
 5.01 Init - 114859 114637  223  1  1   88   96   176 0.918  17.16
 5.00 Prom - 119901 119862   40                              -6.45

 6.00 Prom + 119983 120022   40                              -5.25
 6.01 Sngl + 120784 121149  366  0  0   21   42   268 0.991  11.34
 6.02 PlyA + 122103 122108    6                               1.05

 7.00 Prom + 125109 125148   40                              -6.55
 7.01 Init + 127973 128039   67  1  1   87   81     8 0.118   1.29
 7.02 Intr + 141572 141644   73  0  1   84   66    43 0.134  -0.75
 7.03 Intr + 142532 142599   68  2  2   65  101    79 0.355   4.53
 7.04 Intr + 142708 142832  125  2  2   53  101    70 0.336   4.18
 7.05 Term + 143020 143205  186  0  0   33   41   148 0.309   1.11
 7.06 PlyA + 148125 148130    6                               1.05

 8.06 PlyA - 148237 148232    6                               1.05
 8.05 Term - 153054 152898  157  2  1   91   55   114 0.243   4.82
 8.04 Intr - 154386 154335   52  1  1   88   97    15 0.054  -0.55
 8.03 Intr - 163141 162981  161  0  2   99   90    36 0.039   3.61
 8.02 Intr - 169577 169413  165  1  0   52   61    89 0.048   0.75
 8.01 Init - 185865 185729  137  0  2   91  102    29 0.146   4.27
 8.00 Prom - 187615 187576   40                              -7.05

 9.00 Prom + 189823 189862   40                              -5.15
 9.01 Sngl + 190452 191228  777  2  0   47   36   255 0.323  11.96
 9.02 PlyA + 193599 193604    6                               1.05

10.02 PlyA - 196081 196076    6                               1.05
10.01 Term - 197994 197564  431  1  2  103   49   134 0.870   5.48

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  51321  51534  214  2  1   77   81   156 0.845  11.57


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:89822086_90022808|GENSCAN_predicted_peptide_1|410_aa
MGRESPLLKRRGKSEKDFVLWLACQLRHRRIEQQLASGNGSLQMDIGNLGASDRQIPDGT
LGVGRNAQVKAGQQCCGPLTAETRSPQLEQQRLAAVGCVAHLHFPPTKVALGFINTLGGM
HMCWASLLSLWPWSGKDLASSSGSCKGLVSDLWECALRGTQSHSCSVQMKVGQVHWRPKD
DKAHLAGSSEGAAGVEAAVKGLSVTSGSGALKRMLNCGQRSDGDGMGVLGARRWQASFGR
EQQSWKVTWCTVWLLHNTMDVVSIFGVHESTWSFSLVGCTIKLEIKIKKFTQNHTITWKL
NDLLLKDFWVNNEIKVEIKFFETNENKDTTYQNLWDTAKAVLRGKFIALNALTKKLEKSQ
FTNLTSQLKELKNQEQTILKASRRQEITKIRAELMEIETRKTILKNESKR

>gi568815575f:89822086_90022808|GENSCAN_predicted_CDS_1|1233_bp
atggggagagaatccccgcttctgaaaagaagaggaaaaagtgaaaaagactttgtcttg
tggcttgcatgccagctcagacacagacgaatagagcagcagctggcatcagggaacggt
agtctccaaatggatataggaaacctaggggctagtgatcggcagattcctgatgggacc
ttgggagttgggagaaatgctcaggtgaaggcagggcagcagtgctgtgggcctttaact
gcagaaaccaggtcccctcagctggagcaacagagactggcagctgtggggtgtgtggca
cacttgcacttccctcctacaaaagtagctctgggttttattaatactcttgggggcatg
cacatgtgctgggcctccttgctctctctctggccctggagtggcaaggacttagccagt
agcagtggcagctgcaaggggcttgtcagcgacctctgggagtgtgctctcagaggaaca
cagagccacagctgcagtgttcagatgaaggtggggcaggtgcactggaggcctaaagat
gacaaggcccatttagcaggaagcagtgaaggggcagcaggggtggaggcagctgtaaag
ggcttgtcagtgacctctgggagtggtgctctcaaaagaatgctgaactgtggccagcgt
tcagatggagatggtatgggtgtgcttggggccagaaggtggcaagcctcatttggtagg
gagcagcagagttggaaagtcacgtggtgcacagtctggctgctccacaataccatggat
gtagtttctatctttggggtacatgaaagtacctggtctttctctttggtggggtgcaca
atcaaattagaaatcaagattaagaaatttactcaaaaccatacaattacatggaaattg
aatgacctgctcctgaaggacttttgggtgaataatgaaataaaggttgaaatcaagttc
tttgaaactaatgaaaacaaagatacaacataccagaatctctgggacacagctaaggca
gtgttaagaggaaaatttatagcactaaatgcccttaccaaaaagttagaaaaatctcaa
tttaccaacctaacatcacaactaaaagaactaaagaaccaagagcaaaccattcttaaa
gctagcagaagacaagaaataaccaaaatcagagctgaactgatggagattgagacacga
aaaaccattttaaaaaatgaatccaagaggtga

>gi568815575f:89822086_90022808|GENSCAN_predicted_peptide_2|241_aa
MEAAADGPAETQSPVEKDSPAKTQSPAQDTSIMSRNNADTGRVLALPEHKKKRKGNLPAE
SVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLQISNWFINARRRILPDMLQQRRNDP
IIGHKTGKDAHATHLQSTEASVPAKSGPSGPDNVQSLPLWPLPKGQMSREKQPDPESAPS
QKLTGIAQPKKKVKVSVTSPSSPELVSPEEHADFSSFLLLVDAAVQRAAELELEKKQEPN
P

>gi568815575f:89822086_90022808|GENSCAN_predicted_CDS_2|726_bp
atggaggccgctgcggacggcccggctgagacccaaagcccggtggaaaaagacagcccg
gcgaagacccaaagcccagcccaagacacctcaatcatgtcgagaaataacgcagataca
ggcagagttcttgccttaccagagcacaagaagaagcgcaagggaaacttgccagccgag
tccgttaagatcctccgcgactggatgtataagcatcggtttaaggcctacccttcagaa
gaagagaagcaaatgctgtcagagaagaccaatttgtctttgttgcagatttctaactgg
tttatcaatgctcgcagacgcattctcccggatatgcttcaacagcgtagaaacgacccc
atcattggccacaaaacgggcaaagatgcccatgccacccacctgcagagcaccgaggcg
tctgtgccggccaagtcagggcccagtggtccagacaatgtacaaagcctgcccctgtgg
cccttgccaaagggccagatgtcaagagagaagcaaccagatccggagtcggcccctagc
cagaagctcaccggaatagcccagccgaagaaaaaggtcaaggtttctgtcacatccccg
tcttctccagaacttgtgtctccagaggagcacgccgacttcagcagcttcctgctgcta
gtcgatgcagcagtacaaagggctgccgagctggagctagagaagaagcaagagcctaat
ccatga

>gi568815575f:89822086_90022808|GENSCAN_predicted_peptide_3|155_aa
MKPWTLVVSVTALKVARLEFVPPDVRMCSEFLPSGFVNAPIDTVSSYSGGDLEHLCVDTR
YLADLVGMWRTFASSSGIVNAPISALSKQTTQLYQSAGAEGAGSGLGQPRKGLPQCSGRL
KGSSSAAKVGAQAEEALRASEGREDCQHAVTSQDE

>gi568815575f:89822086_90022808|GENSCAN_predicted_CDS_3|468_bp
atgaagccgtggaccctcgtggtgagtgttacagctcttaaggtggcgcgtctggagttt
gttcctcctgatgttcggatgtgttcggaatttcttccttctgggtttgtgaatgcacca
atcgacactgtatctagctactctggtggggacttggagcacctttgtgtggacactcgg
tatctagctgatctggtggggatgtggagaacctttgcgtctagctctgggattgtaaac
gcaccaatcagcgccctgtcaaaacagaccactcagctctaccaatcagcaggagctgag
ggagccggctctggccttggccagcccagaaagggtctcccacagtgcagtggcaggctg
aagggctcctcaagtgctgccaaagtgggagcccaggcagaggaggcgctgagagcgagc
gagggccgtgaggactgccagcacgctgtcacctctcaggatgaatag

>gi568815575f:89822086_90022808|GENSCAN_predicted_peptide_4|313_aa
MQQEELTILNIYAPNTGGPRFIKQVLRDLQRDLDSHTITVGDFNTPLSILDRSTRQKINN
DVQDLNLALDQVEPIDLYRTLHPKSTEYTFSSAPHCTYSKKDHIIGSKTLLSKCKRMEII
TNSLSDHSAIKLELRIKKLIQNHTNTWKMNNLLLNDYCVNNKIKAEINKFFKTNENEDTT
YQNLWDTFKAVFRGKFIALNAHNRKEERSKIDILTSKLKELEKQQQTNSKASRRHETTKI
RAELKELETQITLQKINESRSCFLKKINKIDRLLARLIKEKREKNQIDAIKNDIRDITTD
LTEICGYSHQRIL

>gi568815575f:89822086_90022808|GENSCAN_predicted_CDS_4|942_bp
atgcagcaagaagagctaactatcctaaatatatatgcacccaatacaggaggacccaga
ttcataaagcaagttcttagagacctacaaagagacttagactctcacacaataacagtg
ggagactttaacaccccactgtcaatattggacagatcaacaagacagaaaattaacaac
gatgttcaggacttgaacttagctctagaccaagtggaaccaatagacctctacagaact
ctccaccccaaatcaacagaatatacattctcttcagcacctcattgcacttattctaaa
aaggaccacataattggaagtaaaacactcctcagcaaatgcaaaagaatggaaatcata
acaaacagtctctcagaccacagtgcaatcaaattagaactcaggattaagaaactcatt
caaaaccacacaaatacatggaaaatgaacaacctgctcctgaatgactactgtgtaaat
aacaaaattaaggcagaaataaataagttcttcaaaaccaatgagaacgaagacacaacg
taccagaatctctgggacacatttaaagcagtgtttagaggaaaatttatagcactaaat
gcccacaacagaaaggaggaaagatctaaaattgacatcctaacatcaaaattaaaagaa
ctagagaagcaacagcaaacaaattcaaaagctagcagaagacatgaaacaactaagatc
agagcagaactgaaggagttagagacacaaataacccttcaaaaaatcaatgaatccagg
agctgctttttgaaaaaaatcaacaaaatagatagactgctagccagactaataaaggag
aaaagagagaagaatcaaatagatgcaataaaaaatgatataagggatatcaccactgat
ctcacagaaatatgtgggtattcccatcagagaatactgtaa

>gi568815575f:89822086_90022808|GENSCAN_predicted_peptide_5|184_aa
MGKSQCKKAENSKNQNASPPPKDHNSSPAREQNWTENEFDELTEVGFRRWVITNNSELKE
HVLSQCKEAKNLEKAQKLCEEYTSINSRVNQAEERISVIEGQLNEIKYEDKIREKRIKRN
EQNLQEIWDYVKRTNLRLIGVPESDRENGTKLENTLQGIIRENFPNLAKQDNIQIQEIQR
IPQR

>gi568815575f:89822086_90022808|GENSCAN_predicted_CDS_5|555_bp
atggggaaaagccagtgcaaaaaggctgaaaattccaaaaaccagaatgcctctcctcct
ccaaaggatcacaactcatctccagcaagggaacaaaactggacagagaatgagtttgat
gaactgacagaagtaggcttcagaaggtgggtaataacaaacaactccgagctaaaggag
catgttctatcccaatgcaaggaagctaagaatcttgaaaaagcacaaaaactttgtgaa
gaatacacaagtatcaacagccgagtcaatcaagcagaagaaaggatatcagtgattgaa
ggtcaacttaatgaaataaagtatgaagacaagattagagaaaaaagaataaaaaggaat
gaacaaaacctccaagaaatatgggactatgtgaaaagaacaaacctacgtttgattggt
gtacctgaaagtgacagggagaatggaaccaagttggaaaacactcttcagggtattatc
cgggagaacttccccaacctagcaaaacaggacaacattcaaattcaggaaatacagaga
ataccacaaagataa

>gi568815575f:89822086_90022808|GENSCAN_predicted_peptide_6|121_aa
MSRGAEEQSGREWKRAVDSSRVSQKRRKEEASEHREFSRELPDPSTFQLPIHLAELHLQH
SIKPCTHPLSPRVIGSFWDTGQVLRIQKAVTLALCPCDKAEGPLSLFTIKQSADGKTERP
L

>gi568815575f:89822086_90022808|GENSCAN_predicted_CDS_6|366_bp
atgtcaagaggagcagaggaacagagcggcagagagtggaagagagcagtagacagcagc
agggtgtcacagaaaagaaggaaggaagaagcgtctgaacatcgagagttcagcagagaa
ctccccgacccctccaccttccagctccccatccatcttgctgagctccacctccaacat
tcaataaaaccttgcactcatcctttgagcccacgtgtgattggatccttctgggacacg
gggcaagtgctcaggatacagaaggctgtcacattggccctctgcccttgcgataaggca
gagggtccattgagcttatttaccatcaaacaatctgcagatggcaaaactgaaagacct
ttgtag

>gi568815575f:89822086_90022808|GENSCAN_predicted_peptide_7|172_aa
MEASAQLGRPHGAFNRGGRQRGIPRSESPVNKSKHASTQFAVESQLRYCVRNWWVLGLTD
FKNEAADLRGVKLQTFAVSVTALKTARLELFVPPGGLVVSLALGVKLQTFASRVAYFDRA
LIGAFTIPELDTKVLHLLIRLVRYRVSTHRFSKAPPEQLDTECRLVHSQTLS

>gi568815575f:89822086_90022808|GENSCAN_predicted_CDS_7|519_bp
atggaggcttctgctcaactgggcaggcctcacggagctttcaatcgtggtggaaggcaa
aggggaattccaagaagtgaaagtcctgtaaataaaagcaagcatgcaagtacgcagttt
gctgtagaaagtcaattgagatattgtgtccggaattggtgggttcttggtctcactgac
tttaagaatgaagccgcggaccttcgcggagtgaagttgcagaccttcgcggtgagtgtt
acagctcttaagacagcgcgtctggagttgtttgttcctcctggtgggctcgtggtctcg
ctggctttaggagtgaagctgcagactttcgcgagccgagtggcctattttgacagggcg
ctgattggtgcgtttacaatccctgagctagatacaaaggttctccacctcctcatcaga
ttagttagatacagagtttccacacacaggttctccaaggccccaccagagcagctagat
acagagtgtcgattggtgcactcacaaaccttgagctaa

>gi568815575f:89822086_90022808|GENSCAN_predicted_peptide_8|223_aa
MEWPALDWGKRHCIEPHFSGSHQRRLSVSRRHTSWEQKDEAFINLRNQEKAQEREIRDTR
KRQKLSWLPCRLTNPRIPEKHLLTATNMASHGTLGKTALEEDVLEKGYTVAAAHFWLILT
YCSESPVKQPKFSLPQSADCRKLQSNIGIGWNREGLEIFLHFENDMERFRRRKEFKGNTH
AGDRLPNLAINWPQNWPQTKSLQHCDMFVMATMPTLKVVGLPE

>gi568815575f:89822086_90022808|GENSCAN_predicted_CDS_8|672_bp
atggagtggcctgccctagactggggaaagaggcactgtatcgagccccattttagtggt
agccatcagagacgcttatctgtgtcccgcagacacactagctgggaacaaaaagatgaa
gcctttataaacttaaggaatcaggagaaggctcaggagagagagataagagacacaaga
aaaaggcagaagctctcatggctgccttgcaggctcacaaatcccagaatccctgagaag
cacctgttaactgctacaaatatggcaagccatggcactttaggaaaaactgccctggaa
gaggatgtcttagaaaagggctatactgttgcagctgcccacttttggttgatacttaca
tattgctcagaatcacccgtaaagcagcccaagttttctcttcctcaatcagctgattgt
agaaaactccaatcaaacataggtattggatggaatagagaaggcttggagatctttctg
cattttgagaatgacatggagaggttcagaagaaggaaagaattcaaaggaaacacacat
gctggagataggctcccaaatctggccataaactggccccaaaactggccacaaacaaaa
tctctgcagcactgtgacatgtttgtgatggccacgatgcccacgctgaaggttgtgggt
ttaccggaatga

>gi568815575f:89822086_90022808|GENSCAN_predicted_peptide_9|258_aa
MTVPPITGAGGLGGKNDFVGLGPGIPCYVQPQDMVACIPATQAVDKRGHGTGQSIDSEGA
SPKPWHLPHDAGFAGTQKTKRFGNFHLDFRRCIQNLEYSGRSVLQGQSPHGEPLLWQCRR
EMWSWSPHTESPVSYCLRRGQPSSSPPNDRSNDGLHSRCRKVSDTQCQPMRAARKGAVPC
KATGVELPMTMGVHLLHHCDLDVRQEAKRDHSGALIFNDCPVGYQTGMGTRSPFVLADFS
HLEWEHLYNACTPIVSWK

>gi568815575f:89822086_90022808|GENSCAN_predicted_CDS_9|777_bp
atgacagtccctcccatcacaggggctggaggcttaggaggaaaaaatgattttgtgggc
ctaggtccagggatcccctgttatgtgcagcctcaggacatggtggcctgcatcccagcc
actcaagctgtggataaaaggggtcatggtacaggtcagtccattgattcagagggtgca
agccccaagccttggcaccttccacatgatgctggttttgcaggtacgcagaagacaaaa
aggtttgggaacttccatttagatttcagaagatgtatacaaaatcttgaatattcaggc
agaagtgtgctgcaggggcagagccctcacggagaacctctgctatggcagtgcagaagg
gaaatgtggagttggagcccccacacagagtccccagtcagctactgtctgagaagaggg
caaccgtcctccagccccccaaatgatagatccaatgacggcttgcacagtagatgcaga
aaagtctcagacactcaatgccaaccaatgagagcagccaggaagggggctgtaccctgc
aaagccacaggggtggagctgcccatgaccatgggagtccacctcttacatcattgtgac
ctggatgtgagacaggaagctaaaagagatcattctggagctttaatatttaatgactgc
cctgttggatatcagactggcatggggactcgtagcccctttgttttggcggatttctcc
catttggaatgggagcatttatacaatgcctgtacccccattgtatcatggaaataa

>gi568815575f:89822086_90022808|GENSCAN_predicted_peptide_10|143_aa
XPTIISLCSHECLQQQYASCPEPMPKEMTKTPTPETVRHTIHKGTHRHPQAAWPNTQLSL
APVSLELVLFQWRVPGELPNPCSSACSMTTSLSLILIFQRAHHTVCHSAVLTDTWLDNQP
GPLLQAKPQHYITNFHITHEDYS

>gi568815575f:89822086_90022808|GENSCAN_predicted_CDS_10|432_bp
ngtcccaccatcatttcactgtgttcacatgagtgcctgcagcaacaatacgccagttgc
ccagaacctatgcctaaagaaatgactaaaaccccaacacctgaaactgtgaggcacact
atccataaaggaacacacaggcatcctcaggctgcctggcccaacacacagctgtctcta
gcaccagtcagcctggagctggtcctattccagtggagagtgcctggggagctacccaac
ccatgttcctctgcctgcagcatgacaaccagcctgtctctgatcctaatcttccagaga
gcccaccacacagtctgccattctgctgtactcacagatacctggcttgacaatcaacca
gggcccctgctgcaagcaaaaccacaacactacattacaaacttccacattacacatgaa
gattatagctga