GENSCAN 1.0	Date run:  6-Nov-116	Time: 19:38:08

Sequence gi568815575f:46737101_46979766 : 242666 bp : 41.56% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   6729   6867  139  0  1  104   42   126 0.363   6.05
 1.02 PlyA +   8779   8784    6                               1.05

 2.03 PlyA -  10284  10279    6                               1.05
 2.02 Term -  12061  11955  107  2  2   80   49    73 0.574   0.19
 2.01 Init -  21929  21362  568  2  1  109   20   486 0.295  37.17
 2.00 Prom -  39901  39862   40                              -5.75

 3.00 Prom +  43540  43579   40                              -8.25
 3.01 Init +  43604  43733  130  1  1   39  119   131 0.628  11.66
 3.02 Intr +  46994  47096  103  0  1   24  115    76 0.078   2.21
 3.03 Intr +  83042  83162  121  2  1  -35   72   146 0.083   0.28
 3.04 Term +  84038  84454  417  1  0  -24   43   246 0.080   3.19
 3.05 PlyA +  84644  84649    6                               1.05

 4.00 Prom +  88917  88956   40                              -3.45
 4.01 Init + 100001 100102  102  1  0  103   90   173 0.121  19.29
 4.02 Intr + 116376 117041  666  2  0  112   94   441 0.694  38.10
 4.03 Intr + 122888 123002  115  1  1   76   77    82 0.924   5.00
 4.04 Intr + 140405 140490   86  0  2   54   82    77 0.436   2.32
 4.05 Term + 142586 142669   84  1  0   46   45    94 0.288  -2.43
 4.06 PlyA + 142796 142801    6                               1.05

 5.00 Prom + 147622 147661   40                              -4.15
 5.01 Init + 153175 153360  186  0  0   76  108    73 0.376   7.21
 5.02 Intr + 166668 166854  187  2  1    0   96   133 0.024   3.64
 5.03 Term + 169952 170091  140  0  2   12   42   146 0.021  -0.46
 5.04 PlyA + 171295 171300    6                               1.05

 6.05 PlyA - 172270 172265    6                               1.05
 6.04 Term - 176153 175929  225  2  0   97   42   244 0.756  16.50
 6.03 Intr - 177703 177512  192  1  0   34   33   137 0.439   1.57
 6.02 Intr - 177831 177768   64  2  1   56   98    65 0.211   2.10
 6.01 Init - 209635 209577   59  1  2   62   62    96 0.019   5.23
 6.00 Prom - 213649 213610   40                              -2.15

 7.04 PlyA - 213782 213777    6                               1.05
 7.03 Term - 224174 224061  114  2  0   51   41    89 0.071  -1.91
 7.02 Intr - 229376 229270  107  0  2   88   97    55 0.130   5.41
 7.01 Init - 241698 241677   22  0  1  105   88     3 0.417   2.08

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 100395  99948  448  2  1   65   40   344 0.874  21.00
S.002 Init - 212436 212373   64  0  1   80   85    86 0.925   8.86


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:46737101_46979766|GENSCAN_predicted_peptide_1|46_aa
XIPSSATFIIGTNICTKSSKQPCMSHPSSKCNSVPDVKVTFRFSSK

>gi568815575f:46737101_46979766|GENSCAN_predicted_CDS_1|141_bp
nnaatcccaagcagtgccacattcatcataggtacgaacatctgcaccaagtcctcaaaa
cagccctgtatgtcacacccaagttccaagtgcaactcagtgcctgatgtaaaagttaca
ttcaggttcagcagcaaataa

>gi568815575f:46737101_46979766|GENSCAN_predicted_peptide_2|224_aa
MEPGDAARPGSGRATGAPPPRLLLLPLLLGWGLRVAAAASASSSGAAAEDSSAMEELATE
KEAEESHRQDSVSLLTFILLLTLTILTIWLFKHRRVRFLHETGLAMIYGEHPCYTPRPPH
PSAAALLLAPRGAPPSLANVFRFFYVSRCDGVGSQGQLSAFSGSLLPLKTIPPLFHVSAL
GTQENERDRVLMPQLHTDSEVSEKETFVCENICLNCSRLFKEGG

>gi568815575f:46737101_46979766|GENSCAN_predicted_CDS_2|675_bp
atggagcctggtgacgcggcgcgccctggctcgggtcgggctaccggggcgccgccgccg
cggctgctgctgctgccgctgctgctgggttgggggctgcgagtcgcggccgcggcctcg
gcctcctcctctggggcggcggcggaggacagcagcgccatggaggagctcgctactgag
aaggaggcggaggagagccaccggcaagacagcgtgagcctgctcaccttcatcctgctg
ctcacgctcaccatcctcaccatctggctcttcaagcaccgccgggtgcgctttctgcac
gagaccgggctggccatgatctatggtgagcacccctgttacaccccccgccctccacac
ccctcggccgccgcgctcctcctggcgccgcgcggtgctcccccttcacttgccaacgtg
ttccgtttcttttacgtttcccgctgcgacggtgttggttcccaaggtcaactgtctgca
ttttctggctctctgctaccgttaaaaacaattccacccctattccacgtttctgcattg
ggaacccaggaaaatgaaagggacagagttcttatgcctcagcttcacactgacagtgaa
gtttctgagaaggaaacctttgtgtgtgaaaacatttgcctgaattgcagcagactgttt
aaggaaggaggatga

>gi568815575f:46737101_46979766|GENSCAN_predicted_peptide_3|256_aa
MTGRLQAEEREKPVVAQSESKNLKTREADSAAPSRRLKGLRVPVSSVWYSSELSPHSPNT
RTLSHSQTHEGHRPGEERVSPSPDSIHQELTEEPLGLKEASAVAWQYSLWACDGGGHGNQ
VEILELKNAIGILKNASESFNSRIDQAEERISELEDRLYEETEEKRIKNNDAHLQDLENS
LKRANLRAIGLKEEVEKEIGIENLPKGIITENIPSLEKYTNIQVQEGYRIPSRFNPKKTT
PRHLIIKLPKIKDKGP

>gi568815575f:46737101_46979766|GENSCAN_predicted_CDS_3|771_bp
atgacaggccgtctgcaagctgaggaaagagagaagccggtagtggctcagtcggagtcc
aaaaacctcaaaaccagggaagccgacagtgcagcccccagtcggaggctgaagggcctg
agagtccccgtctccagtgtctggtattcctctgagctgtctccccacagccccaataca
cgtacactctcacattctcaaacacatgaagggcacaggcctggagaagaaagagtgagt
cccagtccagacagcattcaccaagagttgactgaagagcccttgggccttaaggaagca
tcagcagtagcttggcagtactccctgtgggcctgtgatggtggtggccatgggaatcaa
gtagaaattctggagctgaaaaatgcaattggcatattgaagaatgcatcagagtctttt
aatagcagaattgatcaagcagaagaaagaattagtgagcttgaagacaggctatatgag
gagacagaagaaaaaagaataaaaaacaatgatgcacacctacaagatctagaaaatagc
ctcaaaagggcaaatctaagagctattggccttaaagaggaggtagagaaagagataggg
atagagaatttacccaaagggataataacggagaacatcccaagcctagagaaatatacc
aatatccaagtacaagaaggttatagaataccaagcagatttaacccaaagaagactacc
ccaaggcatttaataatcaaactcccaaagatcaaggataaaggaccctaa

>gi568815575f:46737101_46979766|GENSCAN_predicted_peptide_4|350_aa
MGCFFSKRRKADKESRPENEEERPKQYSWDQREKVDPKDYMFSGLKDETVGRLPGTVAGQ
QFLIQDCENCNIYIFDHSATVTIDDCTNCIIFLGPVKGSVFFRNCRDCKCTLACQQFRVR
DCRKLEVFLCCATQPIIESSSNIKFGCFQWYYPELAFQFKDAGLSIFNNTWSNIHDFTPV
SGELNWSLLPEDAVVQDYVPIPTTEELKAVRVSTEANRSIVPISRGQRQKSSDESCLVVL
FAGDYTIANARKLIDEMVGKGFFLVQTKEVSMKAEDAQRVFREKAPDFLPLLNKGPVIAL
EFNGDGAVEVCQLIVNEIFNGTKMFVSESKETASGDVDSFYNFADIQMGI

>gi568815575f:46737101_46979766|GENSCAN_predicted_CDS_4|1053_bp
atgggctgcttcttctccaagagacggaaggctgacaaggagtcgcggcccgagaacgag
gaggagcggccaaagcagtacagctgggatcagcgcgagaaggttgatccaaaagactac
atgttcagtggactgaaggatgaaacagtaggtcgcttacctgggacggtagcaggacaa
cagtttctcattcaagactgtgagaactgtaacatctatatttttgatcactctgctaca
gttaccattgatgactgtactaactgcataatttttctgggacccgtgaaaggcagcgtg
tttttccggaattgcagagattgcaagtgcacattagcctgccaacaatttcgtgtgcga
gattgtagaaagctggaagtctttttgtgttgtgccactcaacccatcattgagtcttcc
tcaaatatcaaatttggatgttttcaatggtactatcctgaattagctttccagttcaaa
gatgcagggctaagtatcttcaacaatacatggagtaacattcatgactttacacctgtg
tcaggagaactcaactggagccttcttccagaagatgctgtggttcaggactatgttcct
atacctactaccgaagagctcaaagctgttcgtgtttccacagaagccaatagaagcatt
gttccaatatcccggggtcagagacagaagagcagcgatgaatcatgcttagtggtatta
tttgctggtgattacactattgcaaatgccagaaaactaattgatgagatggttggtaaa
ggctttttcctagttcagacaaaggaagtgtccatgaaagctgaggatgctcaaagggtt
tttcgggaaaaagcacctgacttccttcctcttctgaacaaaggtcctgttattgccttg
gagtttaatggggatggtgctgtagaagtatgtcaacttattgtaaacgagatattcaat
gggaccaagatgtttgtatctgaaagcaaggagacggcatctggagatgtagacagcttc
tacaactttgctgatatacagatgggaatatga

>gi568815575f:46737101_46979766|GENSCAN_predicted_peptide_5|170_aa
METTTYLFSLLKVPLSMTVVQPSAMESSQSRLTFLLGGGVGGEKEKRKSELPLPLRPALP
QQTGLSGSPSGTREALSYHAGQQPRARGSPSHTRQPEEACSALLAASAYTQHGVQTLVPD
PAAADPAGIERKIEKFYQEPYIYKFNDLDGMDQFLETTNYQNSTNMKFII

>gi568815575f:46737101_46979766|GENSCAN_predicted_CDS_5|513_bp
atggagacaaccacttacctctttagtcttcttaaagttcctctttctatgactgtggta
cagcctagtgccatggaatcttcccaatccagattaacattccttctgggtgggggggtt
ggaggagaaaaagagaagagaaaatctgagcttcctttacccttaagaccagcattacca
cagcaaacaggattgagtgggagtcccagcggtaccagggaagcactttcctaccacgct
gggcaacagccaagagctagggggagccccagtcacaccaggcagccggaggaggcgtgc
tcagccctgctggcagcatcagcgtatacccagcacggagtccagacgcttgtccccgac
ccagcagcagcagatcctgcaggcattgaaaggaaaatagagaaattctatcaagaaccc
tacatatataaattcaacgacttagatggaatggaccaattccttgaaactacaaactac
caaaactcgaccaatatgaaatttatcatctga

>gi568815575f:46737101_46979766|GENSCAN_predicted_peptide_6|179_aa
MMSLIMEFESHARKSALAIRYDASPAPSPVLLLGISPTGLKIHIALPRASNMTQRRGERE
SVNSRARLAPLSIPELTGQKARQQYWVKSYSLANKSIKKSTTGEKALGSFRPPTAKQPGR
ALAPWSIRPLAADRAGPPATGLAPSAPKPGKGQERRRGRQEGAPEERAATVMALNSCPV

>gi568815575f:46737101_46979766|GENSCAN_predicted_CDS_6|540_bp
atgatgtcactcatcatggaatttgaaagccatgcacgcaaatcggctcttgcaatccgc
tatgatgccagccctgcaccatcacctgtcctgctcctgggaatctcccctacgggcctg
aagattcacatcgcattgccgagggcaagcaacatgactcagagaagaggggagagagaa
agtgtgaattctagagccagacttgcacccctgagtattccagaattgactggacagaaa
gcaaggcaacaatattgggttaaaagctattctctagcaaacaaaagcataaagaagagc
acaactggagaaaaggcactcggttctttccgccccccaacagctaaacagccagggcgc
gccctcgctccctggagcatccgacccctggcggccgacagagcaggtcctcccgccacg
ggtctggccccgtcagccccgaagccaggcaaagggcaggaacggaggagggggcgccag
gagggggcaccggaggaaagagccgcaacagttatggcgctcaattcctgcccggtgtag

>gi568815575f:46737101_46979766|GENSCAN_predicted_peptide_7|80_aa
MATRGQSGDGGSLKCPTHMLMAPKTRSSGPELEIERKGERDRKKYSQGGTKSHMFTLTGP
IKELNKDLMKELRLEFGKCG

>gi568815575f:46737101_46979766|GENSCAN_predicted_CDS_7|243_bp
atggccaccagggggcagtcaggtgatggtggttccctgaagtgccctacccacatgctt
atggctcccaaaacaaggtcctctggtccagagctggagatagaaaggaaaggcgaaaga
gacaggaagaagtacagccaaggaggaactaagtctcacatgttcactctcacagggccc
atcaaagaactcaataaagatctgatgaaggaacttaggctggaatttggaaaatgtgga
taa