GENSCAN 1.0	Date run:  6-Nov-116	Time: 12:50:49

Sequence gi568815575f:24365456_24634068 : 268613 bp : 41.94% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3368   3483  116  1  2   37   86   108 0.393   5.35
 1.02 Intr +   7436   7580  145  2  1   41   86   114 0.521   5.86
 1.03 Intr +  12526  12691  166  0  1   64   30    91 0.021  -0.49
 1.04 Intr +  22892  23037  146  0  2  112   85    45 0.001   5.68
 1.05 Intr +  42792  42923  132  2  0   49   92    73 0.115   3.72
 1.06 Term +  46642  46683   42  0  0  144   48    47 0.592   2.48
 1.07 PlyA +  48605  48610    6                               1.05

 2.04 PlyA -  48651  48646    6                               1.05
 2.03 Term -  59798  59679  120  2  0   93   53    61 0.793   0.59
 2.02 Intr -  61355  61214  142  1  1   55   44    91 0.499   0.83
 2.01 Init -  64465  64122  344  1  2   75   75   359 0.854  30.05
 2.00 Prom -  70798  70759   40                              -5.35

 3.00 Prom +  78039  78078   40                              -1.95
 3.01 Init + 100001 100432  432  1  0   77   26   327 0.001  21.66
 3.02 Intr + 115453 115484   32  0  2   76  110    21 0.008  -0.89
 3.03 Intr + 120176 120210   35  2  2   59   98    60 0.126   1.05
 3.04 Intr + 129287 129428  142  0  1   49  111   109 0.770   7.79
 3.05 Intr + 133374 133445   72  0  0  140   97    46 0.997   8.30
 3.06 Intr + 137872 138056  185  1  2  106   98   151 0.996  16.41
 3.07 Intr + 139754 139843   90  0  0   95  116    44 0.906   6.95
 3.08 Intr + 153478 153555   78  2  0  104   53   100 0.832   6.70
 3.09 Intr + 160743 160819   77  1  2  104  115   -30 0.763  -0.38
 3.10 Intr + 162119 162220  102  1  0   33   88    97 0.753   3.65
 3.11 Intr + 162621 162731  111  2  0   33   99    77 0.879   2.96
 3.12 Intr + 166202 166315  114  1  0  100   79    56 0.807   5.62
 3.13 Intr + 171049 171085   37  0  1   77  110     6 0.039  -1.38
 3.14 Term + 173679 173827  149  1  2   67   36   122 0.038   1.98
 3.15 PlyA + 176493 176498    6                               1.05

 4.19 PlyA - 177982 177977    6                               1.05
 4.18 Term - 179036 178639  398  0  2   58   38   207 0.860   6.95
 4.17 Intr - 180743 180584  160  2  1   57  100   117 0.673   8.44
 4.16 Intr - 193385 193261  125  0  2   64   49    97 0.146   2.78
 4.15 Intr - 196662 196384  279  1  0   75   23   126 0.075   1.33
 4.14 Intr - 197092 196988  105  2  0   89   50   151 0.229  10.67
 4.13 Intr - 197894 197715  180  0  0  117   55   106 0.786   9.12
 4.12 Intr - 198365 198275   91  2  1   86  -13    84 0.027  -3.25
 4.11 Intr - 200737 200654   84  1  0   76   63    56 0.026   1.00
 4.10 Intr - 209863 209675  189  1  0   48   71   221 0.760  15.26
 4.09 Intr - 211889 211731  159  2  0   31   26   160 0.684   3.36
 4.08 Intr - 214003 213861  143  2  2   70   75   168 0.850  12.85
 4.07 Intr - 221914 221786  129  2  0   73   94   128 0.667  11.65
 4.06 Intr - 224719 224465  255  2  0   56   78   199 0.117  12.19
 4.05 Intr - 239473 239372  102  2  0   34  111    64 0.383   2.53
 4.04 Intr - 242406 242290  117  1  0  121   94    70 0.969  10.42
 4.03 Intr - 246635 246582   54  0  0   73   98    45 0.655   2.03
 4.02 Intr - 253629 253530  100  0  1  136   94   118 0.997  15.96
 4.01 Init - 255487 255293  195  1  0   95   28   107 0.504   4.38
 4.00 Prom - 260309 260270   40                              -5.55

 5.00 Prom + 262676 262715   40                              -3.65
 5.01 Init + 265188 265219   32  2  2   48  116    13 0.414  -0.63
 5.02 Intr + 265801 265925  125  1  2   76   95    46 0.907   3.41
 5.03 Term + 266827 267146  320  2  2   64   47   248 0.986  12.36
 5.04 PlyA + 267390 267395    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr + 146986 147044   59  0  2   86   82    33 0.816  -0.74
S.002 Intr + 148024 148244  221  1  2   66   44   178 0.936   8.22
S.003 Term - 174141 173971  171  0  0   86   49   124 0.842   5.14


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:24365456_24634068|GENSCAN_predicted_peptide_1|248_aa
MLIACSGLELLEILMAYGHLGQDLQDQVAPAMERGGWKRIFAGEEVKELKAQATGRIIYV
DTKIIKNSYCWHSVEEDDNESGPRIFKNTQVTVTEVNQVGLGGWALRISISKFPGVAAAA
AGSGTIHILRTCLDANHMVALQDPVWRVAASGLVQTMEDTSRSEIGRERQAYLFLQPTPC
QAMLVSSFFPLCVRGNRLWVKSSLVIHPWCLRRFHKCIHIPYQGLAGQSNSRPLWGSDWH
LTSDGITI

>gi568815575f:24365456_24634068|GENSCAN_predicted_CDS_1|747_bp
atgctgattgcatgtagtgggctggagcttcttgagatcctcatggcctatggtcatctg
ggccaggacctgcaggatcaagtcgccccagccatggagcgaggagggtggaaaaggatc
tttgcaggagaggaggtcaaggagttgaaggcccaggctactggaaggattatctatgtg
gataccaaaatcatcaagaattcatactgctggcatagtgttgaagaggatgataatgag
tcaggccctagaatcttcaagaatactcaggtaactgtaactgaagtcaaccaagtaggt
ctgggtgggtgggccctgagaattagcatttccaagtttccaggtgttgctgctgctgct
gctggatcagggaccatccacattttgagaacctgtctggatgcaaatcacatggtggcc
ctccaggatccagtctggagagtagctgcttctggtttggtccagacaatggaggacacc
agtagatctgagataggaagagagaggcaggcgtacttattcctgcagcccactccctgc
caggctatgctggtcagcagcttttttcctctgtgtgtccgtggaaatcgactttgggtt
aagagtagtctggttatccatccgtggtgtttgcggaggtttcacaaatgcatacacatc
ccttatcaaggacttgctggccagtcaaatagtagacctttgtgggggtcagactggcat
ctgacatcagatggcatcaccatctga

>gi568815575f:24365456_24634068|GENSCAN_predicted_peptide_2|201_aa
MTKKRRNNGRAKKGRGHVQPIRCTKCARCVPKDKAIKKFVIRNIVEAAAIRDISEASVFD
AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPRPPPKPMIWVQN
TADIRHVLTGFAAGKPPSLGRSCVGKSGSCPLSRCLQDGCPQVIPVGCINIRQKPPLLCN
HVGKCIIRSKLCGADLLAGIH

>gi568815575f:24365456_24634068|GENSCAN_predicted_CDS_2|606_bp
atgacaaagaaaagaaggaacaatggtcgtgccaaaaagggccgcggccacgtgcagcct
attcgctgcactaaatgtgcccgatgcgtgcccaaggacaaggccattaagaaattcgtc
attcgaaacatagtggaggccgcagcaatcagggacatttctgaagcgagcgtcttcgat
gcctatgtgcttcccaagctgtatgtgaagctacattactgtgtgagttgtgcaattcac
agcaaagtagtcaggaatcgatctcgtgaagcccgcaaggaccgaacacccccaccccga
tttagacctgcgggtgctgccccacgtcccccaccaaagcccatgatctgggtccagaat
actgcagacatcagacatgtgttaactgggtttgctgccggcaagccaccatccttggga
aggagttgtgtgggcaaatcaggaagttgccctctcagcagatgtctccaggatggctgc
cctcaggttattcctgttggttgtataaatataagacagaagccaccactgctttgcaat
cacgtggggaagtgtatcatccgctccaagctctgtggagcagacctcctggccgggatc
cactga

>gi568815575f:24365456_24634068|GENSCAN_predicted_peptide_3|551_aa
MRLFRWLLKQPVPKQIERYSRFSPSPLSIKQFLDFGEYGAKGPHGPGAAAIRAATPDLRS
FGVKSVGTAGGAREYPGGSPGARISGRGGAGPGPLAPSLGLTRRHRNGVSLQDPHRRRDS
PNLRSLASNLLDTNLTALKTSERDVFEIRVVSGNRTLTAGSYPYRQGRDNACEKTSYMFL
RKELPVRLANTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFL
QVLIKVRNRHNDVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHT
LLFGGDTNPVHPKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPD
KPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLG
GGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEG
VGTDAVIYLKGQLNSLQVTNFPETRSRLIELSRGLNAVVLSVKKDCLLQVKQRELLSPTC
SERGITVIPSA

>gi568815575f:24365456_24634068|GENSCAN_predicted_CDS_3|1656_bp
atgcggctgttccggtggctgctgaagcagccggtgcccaagcagatcgagcgctactcg
cgcttttcgccgtcgccgctctccatcaaacaattcctggacttcggtgagtacggggcc
aagggtccccatgggcccggggccgccgccattcgggctgccaccccggatctccgcagc
ttcggggtaaagtctgtgggaaccgcaggcggggctagggaatatccggggggctctcct
ggggctcggatttcggggcgcggaggggcagggcctggccccctcgcacccagcctggga
cttacccggagacacagaaacggcgtctcattgcaggaccctcatcgcaggcgagactcc
ccaaacctgcggtcgttagcttcaaatctgcttgacacaaacctcacagcccttaaaact
tcagaacgagatgtttttgaaataagggtggtttctgggaacagaacattaacagcaggc
agttatccctatcggcaagggagagataatgcatgtgagaaaacttcatatatgtttcta
cgaaaggaacttcctgtgcggctggctaacacaatgagagaagttaatcttctgccggat
aatttacttaaccgcccttcagtgggattggttcagagttggtatatgcagagttttctt
gaacttttagaatatgaaaataagagccctgaggatccacaggtcttggataactttcta
caagttctgattaaagtcagaaatagacacaatgatgtggttcctacaatggcacaagga
gtgattgaatacaaggagaagtttgggtttgatcctttcattagcactaacatccaatat
tttctggatcggttttataccaaccgcatctctttccgcatgcttattaatcagcacaca
cttctgtttgggggtgacactaatcctgttcatcctaaacacataggaagtatcgatccc
acctgtaacgtggcggatgtggtgaaagatgcatatgaaacagccaagatgctgtgtgaa
cagtattacctggtagctccagagctggaagttgaagaattcaatgccaaagcgccagac
aaacctattcaggtggtttatgtgccctcacatctgtttcatatgctatttgagttgttc
aagaactcaatgagagcgacagttgaactctatgaagacagaaaagagggctaccctgct
gttaaaaccctcgttactttgggtaaagaagacttatccattaagatcagtgacctaggt
ggtggtgtcccacttcgaaaaatagatcgtctttttaactacatgtattctactgctcct
agacccagcctggagcctaccagagctgcccctttggctggatttggttatggtttgcca
atttcccgtctgtatgctagatattttcaaggagatctgaaactgtattccatggaagga
gtgggtactgatgctgtcatttatttgaagggacaattaaattcccttcaagttaccaat
tttccagagacaagatcaagactaatagaactttctagaggactgaatgctgtggtcctc
tctgtgaagaaagattgccttctgcaagtcaaacagagagaactgctttctcccacctgc
tctgagcgtggcatcacagttattcctagtgcttaa

>gi568815575f:24365456_24634068|GENSCAN_predicted_peptide_4|954_aa
MGRPIRAEAVGQWKASSGFNAVEGNGVSGGGTERIMCREQPSWCRAPSLGPHSAPFLLFH
SFSSRTLTAPAPFADETNCQCQAPHEKLTIAQARLGTPGPFTTWQLASSKPPVQKDTDRP
VRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGGLHRISDIPLMAITWVVEVKGILNY
LDDHETVSFVCSDDLTHKFKGFTVMNEAERYEALRHCRYVDEVIRDAPWTLTPEFLEKHK
VLLILPHSLSSKIRESGSAAKTTESPKSLSISKRDMHIHPSGDITLLSLQQIDFVAHDDI
PYSSAGSDDVYKHIKEAGMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELN
VSFINISHLAQGTVQAVRMHSLPSCDDKPGCSSEMKSNVLHGRVDKSRNLRGDRDLMPEK
RYRFQNQVDKMKEKVKNVEERSKEFVNRVEEKSHDLIQKWEEKSREFIGNFLELFGPDGA
WKIEVFASIAKFPIRKALLFYPLTSSNMKQSEWSFENKQQIVNPLLRILQRFLFSEETVR
SSLKKRFLSGAFPEHPVCNRSCPAPSPTCYPLALFFSQTTDPSDIPYFVYCVIPPHICED
CKVNRCLLSNLSLEADVPGEEQPDAAGLIPEAEPSEELGEVQRLLAGQPTQTLASRVTLT
LLRKDAEFPRETCTDGVTSALVLPPPPPSKPPVAAAVPSTCYFCVHKGPARCLPPPQLCQ
NKIVSNRAKKQGWDCCAISHTERLASGKHAPVCQDLTKAKKCQAQEEQDFPIGQQDNELK
WAPICSVYLKPQCGDLDRVPYKVECRARHRKQTLQIQINRREEKRGQAVEISDEPCVFIP
SGIQKRKSGEKQDQRRETNSGADLTNVGYMESRRAEVQTHHVPARMTTSGNGEMQRGSVS
QWDPATPRAEDSTVSMEGTHRQHVPRRLRVTPYSPKSKQNENQKHPPPLQPIKS

>gi568815575f:24365456_24634068|GENSCAN_predicted_CDS_4|2865_bp
atgggccggcctattagagctgaagctgtggggcagtggaaagcaagcagcggctttaat
gcagtggaaggaaatggagtcagtgggggtgggacagaaaggatcatgtgcagagagcag
ccaagttggtgcagagcaccttctctggggccacattctgcccctttcctgcttttccac
agtttcagttccaggaccctgactgcacctgccccatttgctgatgaaaccaactgccag
tgtcaagcaccccatgaaaaactgaccattgctcaggcccgcttaggaacaccaggccct
ttcacaacatggcagcttgcttcttcaaagccaccagtgcagaaagacactgacaggcct
gtcagagtatacgccgatggaatatttgacctcttccactcaggtcatgcaagagccctt
atgcaagcaaaaacactgtttcccaacagctacttgttggtaggaggtttacacagaatt
tcagatattcccttaatggctattacatgggttgtggaagtcaagggcatattgaactac
ttggatgaccatgagactgtatcctttgtttgcagtgatgatctcacccacaaattcaaa
ggtttcaccgtgatgaatgaagccgagagatacgaagctctcagacactgtcgctacgta
gacgaagttatcagagatgctccctggacactcacgccagagtttctggaaaaacacaag
gtacttctcattctcccacattctctaagtagcaagattagggagtctggttctgcagcc
aagactacggaaagcccaaagtctctctcaatttctaaaagagacatgcacatccatccc
agtggtgacatcactcttctctctcttcaacagattgactttgtggctcatgatgacatt
ccgtattcctctgctggctctgatgatgtttacaagcacataaaggaagcagggatgttc
gttccaacgcagagaacagaaggcatctcaacatcggacatcattaccagaattgttcgt
gactatgatgtttatgcccgacgtaacctccagagagggtatacagccaaggaactgaat
gtcagctttataaatataagccacttagctcaaggaaccgtgcaggcagttcggatgcac
tcactgccttcctgtgacgacaaacctggctgcagttcagagatgaaatctaatgtgttg
catgggcgtgtagacaaatcacggaacctcagaggtgacagggacctgatgccagagaag
aggtaccgtttccagaaccaagtggacaaaatgaaggaaaaagtcaagaatgtggaggaa
agatcaaaggaatttgtgaacagagtggaagaaaagagccatgatctaattcaaaagtgg
gaagagaagtcaagggaattcattggcaacttcctagaactgtttggacctgatggagca
tggaaaatagaagtttttgcatctattgccaaattccccatcagaaaggcattgctgttt
tatcctcttaccagcagtaacatgaagcagtcagaatggtcttttgaaaacaagcagcag
attgttaatcctttgctcagaattctccagaggtttctcttctcagaggagactgtacgt
tcttcactcaagaagcgttttctcagtggggccttccccgagcaccctgtttgcaatcgc
agctgccctgctcccagccccacttgctatcctctcgccctctttttctcacagaccaca
gatccatctgacataccatattttgtttattgtgtgattcctcctcatatctgtgaggat
tgcaaagttaacagatgccttctctccaatttatctttagaagcagatgttccaggagag
gagcagccggatgctgcaggccttatccccgaagcagagccctctgaagagttgggcgag
gtgcagagacttctagctggacaacctacacaaaccttagcgtctagagtcactctaacc
ttgctaaggaaggatgcagagttccctagagagacttgcactgatggggtgacttctgct
ttggtccttccaccacccccaccaagtaaaccacctgtggcagcggctgttccctcaacc
tgctacttctgcgtccataagggtcctgcacgttgcctcccaccaccccagctctgccag
aataaaattgtttccaatagagctaagaaacaagggtgggattgctgtgccataagtcac
actgaacgacttgcttctggcaagcatgctcctgtgtgtcaggaccttaccaaggcaaag
aaatgccaggctcaagaggagcaggacttccccattggtcagcaagacaatgaactgaaa
tgggctcccatctgctctgtctacctgaagccacagtgtggggacctcgacagggtcccc
tacaaagttgagtgcagagccagacacagaaaacagactctccaaattcagatcaatcga
cgtgaagaaaaacgaggacaggcggttgagatctcagatgaaccatgtgtgttcatcccc
tccggtatccaaaagaggaagagcggcgagaagcaggaccagaggagagaaaccaactct
ggagccgatctcacaaatgtgggctacatggaatccaggagggcagaagtacaaacccac
catgttcctgctaggatgacgactagtgggaatggggaaatgcaaagaggatctgtctcc
caatgggacccggccacccccagggcagaggattcaacagtgtctatggaaggcactcac
agacaacatgttccaaggaggcttcgtgtcactccttattcccccaaatccaaacagaat
gaaaaccaaaaacaccctccaccactacaacccatcaagagctag

>gi568815575f:24365456_24634068|GENSCAN_predicted_peptide_5|158_aa
MHITVLYISKSAFHVRQNPSTKKRFRKAFSLRGQTNVHPENTVFFSLMVGSNEGCQEGGV
TKSQKDGKNHKHSHKESYSIYIYKVLKQVHLNSGISSKAMGIMNSFVNIFKCIIPDALQV
LDDHLQGDPYSLCLLPREMANHTVSHNTKALTKYTSSK

>gi568815575f:24365456_24634068|GENSCAN_predicted_CDS_5|477_bp
atgcatatcacagtcctctatatttcaaaaagtgccttccatgtaaggcagaaccccagc
accaaaaagcggttcagaaaagcattttctttaaggggccaaacgaacgtgcaccctgaa
aatacagtttttttctccctgatggttggatccaatgaagggtgccaagaaggtggtgtg
accaagagccagaaggatggcaagaatcacaagcatagccacaaggaaagctactctatc
tacatttacaaggtattgaagcaggtccatctcaactctggcatctcatcgaaggccatg
ggcatcatgaactcatttgtcaatatcttcaagtgcatcattcctgatgcattacaagta
ctcgacgatcacctccagggagatccatacagcttgtgcctgctgcctagggagatggcc
aatcacactgtgtctcacaacaccaaggccctcaccaagtacaccagctccaagtga