GENSCAN 1.0	Date run:  3-Nov-116	Time: 03:10:17

Sequence gi568815574r:2388638_2590719 : 202082 bp : 46.55% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3462   3541   80  0  2   81   51    80 0.076   2.79
 1.02 Intr +   6628   6726   99  2  0   81  102    11 0.492   1.88
 1.03 Intr +  30987  31115  129  1  0   23   47   102 0.002   0.27
 1.04 Intr +  38753  38868  116  0  2   76   48   122 0.255   7.17
 1.05 Intr +  41822  41950  129  1  0   79   64    33 0.030   0.89
 1.06 Term +  52491  52634  144  2  0   17   48   135 0.462   0.31
 1.07 PlyA +  53871  53876    6                               1.05

 2.00 Prom +  56689  56728   40                              -3.56
 2.01 Init +  66496  66599  104  0  2   66   87    49 0.339   2.32
 2.02 Intr +  67458  67639  182  0  2   23   75   150 0.252   6.71
 2.03 Term +  90836  90930   95  0  2  -15   48   153 0.611  -1.01
 2.04 PlyA +  92185  92190    6                               1.05

 3.02 PlyA -  93339  93334    6                               1.05
 3.01 Sngl - 102082  99998 2085  1  0   82   44  4609 0.994 450.19
 3.00 Prom - 106126 106087   40                              -6.06

 4.03 PlyA - 107545 107540    6                               1.05
 4.02 Term - 110408 110389   20  0  2   97   44    14 0.464  -3.62
 4.01 Init - 112288 112180  109  1  1   95   76   277 0.968  25.58
 4.00 Prom - 126916 126877   40                              -5.96

 5.00 Prom + 130621 130660   40                              -7.66
 5.01 Sngl + 131279 132460 1182  1  0   83   48  3711 0.772 362.57
 5.02 PlyA + 133746 133751    6                               1.05

 6.07 PlyA - 135391 135386    6                               1.05
 6.06 Term - 155125 155048   78  1  0  127   42     4 0.016  -2.54
 6.05 Intr - 168990 168884  107  1  2   54   91   105 0.063   7.33
 6.04 Intr - 177916 177788  129  2  0   48   47   126 0.170   5.17
 6.03 Intr - 195018 194815  204  1  0   79  101   125 0.179  12.07
 6.02 Intr - 195226 195051  176  0  2   71   64    26 0.089  -1.92
 6.01 Init - 195517 195429   89  1  2   95   48   183 0.082  15.44

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  30965  31115  151  1  1   44   47    92 0.875   0.90


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815574r:2388638_2590719|GENSCAN_predicted_peptide_1|232_aa
XEATGNASNSNVLLKQSILVLPGEMEMEPLPARVKQEGVTDQHPTHLGHWGQPGGGGAEL
QYYAAIKNDEFMSFVGTWMKLETIILSKLSQGQKTKHRMFSLIGRNRFMENPLELEEDKA
IKGLLKQLQGLTGELRHSSAQVMGNMFRKIGLPQGFGFSQPMTRHDQRTGWTLLLPNSSP
SLSSQGAMITPRSFPKFYLITFTNKDIQGAEFKVKEACEIHKEQEEQRLRTI

>gi568815574r:2388638_2590719|GENSCAN_predicted_CDS_1|699_bp
nnggaggccacaggcaatgccagcaattcaaacgtgctgcttaaacaaagcatcctggtc
cttcctggggaaatggaaatggaacccctccctgcccgtgtgaagcaggagggtgtcaca
gatcagcacccaacacacctcggccactggggccagccagggggtggaggggccgagcta
caatactatgcagccatcaaaaatgatgagttcatgtccttcgtagggacatggatgaag
ctggaaaccatcattctcagcaaactatcgcaaggacaaaaaaccaaacaccgcatgttc
tcactcataggaaggaatagattcatggagaatccacttgagctggaggaagacaaggct
atcaagggtctcctgaagcagctgcagggactgacgggggagctccgccacagttcagca
caggtgatggggaacatgtttcgcaagatcgggcttcctcagggttttgggttttcacag
ccaatgactcggcatgaccagagaactggctggacgctccttctacccaattcctcgccg
tctctttcttcacagggtgcaatgatcacacctcggagctttccaaaattctatctcatc
acgttcaccaacaaagacatccaaggagcagaattcaaagtcaaggaagcctgtgaaatt
cacaaggagcaagaagaacaaaggctaaggactatttga

>gi568815574r:2388638_2590719|GENSCAN_predicted_peptide_2|126_aa
MSFAGTCMEVEAIILSKLTQQQKTKYLLFSLISGSILTSLRNRAQSTHHRGDPRNKRHDC
NRDNVRDAKNQNKRQEYYNRDKVDTTWKMDDSFVTACGYGTTVYALKTFRKNATRGPPHV
HTEDIP

>gi568815574r:2388638_2590719|GENSCAN_predicted_CDS_2|381_bp
atgtcctttgcaggaacctgcatggaggtggaggccattatccttagcaaacttacacag
caacagaagacaaaatacctcctgttctcactgataagtggtagcatcctcaccagcctc
aggaacagggcacagtcaactcaccacaggggtgaccccagaaacaagagacacgactgt
aacagggacaatgtgcgggacgccaaaaaccagaacaagagacaggaatattataacagg
gacaaagtcgacaccacatggaagatggatgactcatttgtcacagcatgtggctacggg
accaccgtgtacgcactgaagacattccgtaagaatgcgaccaggggaccgccacatgtg
cacactgaagacattccctaa

>gi568815574r:2388638_2590719|GENSCAN_predicted_peptide_3|694_aa
MENKSLESSQTDLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNT
SNLSYHLEKNHPEEFCEFVKSNTEQMREAFATAFSKLKPESSQQPGQDALAVKAGHGYDS
KKQQELTAAVLGLICEGLYPASIVDEPTFKVLLKTADPRYELPSRKYISTKAIPEKYGAV
REVILKELAEATWCGISTDMWRSENQNRAYVTLAAHFLGLGAPNCLSMGSRCLKTFEVPE
ENTAETITRVLYEVFIEWGISAKVFGATTNYGKDIVKACSLLDVAVHMPCLGHTFNAGIQ
QAFQLPKLGALLSRCRKLVEYFQQSAVAMYMLYEKQKQQNVAHCMLVSNRVSWWGSTLAM
LQRLKEQQFVIAGVLVEDSNNHHLMLEASEWATIEGLVELLQPFKQVAEMLSASRYPTIS
MVKPLLHMLLNTTLNIKETDSKELSMAKEVIAKELSKTYQETPEIDMFLNVATFLDPRYK
RLPFLSAFERQQVENRVVEEAKGLLDKVKDGGYRPAEDKIFPVPEEPPVKKLMRTSTPPP
ASVINNMLAEIFCQTGGVEDQEEWHAQVVEELSNFKSQKVLGLNEDPLKWWSDRLALFPL
LPKVLQKYWCVTATRVAPERLFGSAANVVSAKRNRLAPAHVDEQVFLYENARSGAEAEPE
DQDEGEWGLDQEQVFSLGDGVSGGFFGIRDSSFL

>gi568815574r:2388638_2590719|GENSCAN_predicted_CDS_3|2085_bp
atggagaataaaagcctggagagctcccagacagacctgaagctggtggcccacccccgc
gccaagagcaaggtgtggaagtatttcggcttcgacaccaacgccgagggatgcatcctg
cagtggaagaaaatctactgccgcatctgcatggcccagatcgcctactccggaaacacc
tccaacctgtcctaccacctggagaagaaccaccccgaggaattctgcgagttcgtcaag
agcaacacggagcagatgcgtgaagccttcgccaccgccttctccaagctgaagcccgag
tcgtcccagcagcccgggcaggacgcgctggccgtcaaggccggccacggctacgacagc
aagaagcagcaggagctgacggccgccgtgctgggcctcatctgcgaggggctgtaccca
gcctccatcgtggacgagcccaccttcaaggtgctgctgaagacggccgacccccggtat
gagctgcccagccggaagtacatctctaccaaggccatccctgagaagtacggggccgtc
cgggaggtgatcctgaaggagctggccgaggccacctggtgtggcatctccaccgacatg
tggaggagtgagaatcagaaccgcgcctacgtcacgctggccgcccacttcctgggcctg
ggcgcccccaactgcctgtccatgggctcccgctgcctgaagaccttcgaggtgcccgaa
gagaacacggcggagaccatcacgcgagtgctctatgaggtcttcatcgagtggggcatc
agcgccaaggtcttcggggccaccaccaactatggcaaggacatcgtgaaggcgtgctcc
ctgctggacgtcgcagtgcacatgccctgcctgggccacaccttcaatgccggcatccag
caggccttccagctcccgaagctgggggcgctgctgtcgcgctgccgcaaactggtggag
tacttccagcagtctgccgtggccatgtacatgctctatgagaagcagaagcagcagaac
gtggcccactgcatgctggtgagcaaccgcgtctcctggtgggggagcacgctggccatg
ctgcagcgcctcaaggagcagcagttcgtcatcgccggggtcttggtggaggacagcaac
aaccaccacctcatgctggaggccagcgagtgggccaccatcgaggggctggtggagctc
ctgcagcccttcaagcaggtggccgagatgctgtcggcctccaggtaccccaccatcagc
atggtgaagccgctgctgcacatgctcctgaacaccacgctcaacatcaaggagaccgac
tccaaggagctcagcatggccaaggaggtcatcgccaaggagctttccaagacctaccag
gagacgcccgagatcgacatgtttctcaacgtggccaccttcctggacccccgctacaag
aggctgcccttcctctccgccttcgagcggcagcaggtggagaatcgcgtggtggaagag
gccaagggcctgctggacaaggtcaaagacggcggctaccggccggctgaggacaagatc
ttcccggtgcccgaggagcctcccgtcaagaagctcatgcggacatccacgccgccgccc
gccagcgtcatcaacaacatgctggccgagatcttctgccagacaggcggcgtggaggac
caggaagagtggcatgcccaggtggtggaggagctgagcaacttcaagtcccagaaggtg
cttggcctcaacgaagaccccctcaagtggtggtcagaccgcctggccctcttccccctg
ctgcccaaggtgctgcagaagtactggtgcgtgacggccacgcgcgtcgcccctgagcgt
ctcttcggatccgccgccaacgtggtcagcgccaagaggaaccggctggctcccgcgcac
gtggacgagcaggtgtttctgtatgagaacgcccggagtggggcagaggcggaacccgag
gaccaggacgagggggagtggggcctggaccaggagcaggtgttctccttgggggatggc
gtcagcggcggtttctttggcattagggacagcagcttcctgtag

>gi568815574r:2388638_2590719|GENSCAN_predicted_peptide_4|42_aa
MSPLSAARAALRVYAVGAAVILAQLLRRCRGGFLEPAREKEL

>gi568815574r:2388638_2590719|GENSCAN_predicted_CDS_4|129_bp
atgtcgccattgtctgcggcgcgggcggccctgcgggtctacgcggtaggcgccgcggtg
atcctggcgcagctgctgcggcgctgccgcgggggcttcctggagccagccagagaaaaa
gagctttga

>gi568815574r:2388638_2590719|GENSCAN_predicted_peptide_5|393_aa
MIIILTIIITIIAIILTVTIIILTIIITILTIILTVTIIILTIIILTIIITIIITIIILT
IIITIIILTIILTIIILTIIILTIIILTIIITIIILTIIILTIIILTIILTIIILTIIIL
TIIITIIILTIIIITIIITIIILTIIITIIILTIIITIIILTIIILTIIILTITIIILTI
IITIIILTIIILTIITITILTIIILTIIITIIITVIITAIILIHIIIILTIILTIIILTI
IILTIIITVIILTNIITAIILIHIIIILTIIITILTIITLAIIITIIILAIIIAVAIITI
IILTITITTVTIIITIILIVTIIITIFIITITIIIIITKLKCLLCPLFQRLLTSGFTVCT
RKVFVIMWPLIVFSKRVRGITVDVFCLNVSKPC

>gi568815574r:2388638_2590719|GENSCAN_predicted_CDS_5|1182_bp
atgatcatcatcctcaccatcatcatcaccatcatcgccatcatcctcactgtcaccatc
atcatcctcaccatcatcatcaccatcctcaccatcatcctcactgtcaccatcatcatc
ctcaccatcatcatcctcaccatcatcatcaccatcatcatcaccatcatcatcctcacc
atcatcatcaccatcatcatcctcaccatcatcctcaccatcatcatcctcaccatcatc
atcctcaccatcatcatcctcaccatcatcatcaccatcatcatcctcaccatcatcatc
ctcaccatcatcatcctcaccatcatcctcaccatcatcatcctcaccatcatcatcctc
accatcatcatcaccatcatcatcctcaccatcatcatcatcaccatcatcatcaccatc
atcatcctcaccatcatcatcaccatcatcatcctcaccatcatcatcaccatcatcatc
ctcaccatcatcatcctcaccatcatcatcctcaccatcaccatcatcatcctcaccatc
atcatcaccatcatcatcctcaccatcatcatcctcaccatcatcaccatcaccatcctc
accatcatcatcctcaccatcatcatcaccatcatcatcaccgtcatcatcaccgccatc
atcctcatacacatcatcatcatcctcaccatcatcctcaccatcatcatcctcaccatc
atcatcctcaccatcatcatcaccgtcatcatcctcaccaacatcatcactgccatcatc
ctcatacacatcatcatcatcctcaccatcatcatcaccatcctcaccatcatcactctc
gccataatcatcaccatcatcatcctcgccatcatcatcgctgtcgccatcatcaccatc
atcatcctcaccatcaccatcaccactgtcaccatcatcatcaccatcatcctcatcgtc
accatcatcatcaccatcttcattatcaccatcaccatcatcattattatcaccaagctt
aaatgcttgctttgccctcttttccagagactcttgacctctggttttactgtgtgtacc
agaaaagtcttcgtaattatgtggcctctgattgttttttctaagagagtaagaggaatc
acggtggacgtattctgcctgaatgtgtcaaaaccgtgctaa

>gi568815574r:2388638_2590719|GENSCAN_predicted_peptide_6|260_aa
MQSLISPVTKAILVALFIFAILLILYVILWDAPGRAGECARAGALGGHGWGAPTSGRTRN
PDAGLNPRIHGARGSPMGHGKRQMRVQRGPSHPPPGRLGSKAHRRSRLWPPPVQQNAGSR
VGPMRYGTPGAIGSLALCSGGGDPALKFPITSMDKHGKIMSWKNSIALQIQTRHFAHETR
VPEISRSKSRIRDRQTYGMYHFGNFGEERIKAEMRIQKACHLKIKKSSLDANGKVNSLLK
LSASRCPDGISPLGERKKLG

>gi568815574r:2388638_2590719|GENSCAN_predicted_CDS_6|783_bp
atgcagtctctcatctcgccggtgaccaaggcgatcctggtggccctcttcatcttcgcc
atcctcctcatcctctacgtgatcctctgggacgcaccggggagagcgggtgagtgcgct
cgtgcgggcgctttggggggccacggttggggagccccaacttcggggaggacgcggaat
ccggacgcgggactgaacccgaggattcacggagcccggggctcccctatggggcacggg
aagcggcagatgcgcgtgcagagaggtccgtcccacccaccccctgggcgccttgggtcc
aaggcgcataggcgctcccgcctgtggccgccaccggtgcagcagaacgcgggctctcgg
gtgggtccaatgcgctatggcacaccaggcgctatcgggtccctagccctctgctccggc
ggtggggaccccgcactcaagttccctataacctccatggacaaacacggaaaaatcatg
tcttggaagaacagcatcgccctacagatacagactaggcactttgcacatgaaacaaga
gtcccagaaatttctagaagcaaatctcgcattcgtgaccgccagacctacgggatgtac
cactttgggaattttggagaagaaagaataaaggcagaaatgaggatacagaaagcatgt
cacttgaagatcaagaagtcaagcttggatgccaatggtaaagtgaattcattgttaaaa
ctttcagcaagccgctgtcctgacggtatcagccccctaggagaaaggaaaaagttgggt
tga