GENSCAN 1.0	Date run:  4-Nov-116	Time: 07:53:27

Sequence gi568815574r:21780357_21903898 : 123542 bp : 43.35% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  30753  30800   48  2  0   59  103    81 0.384   7.65
 1.02 Intr +  39553  39638   86  0  2   88   80    89 0.084   6.72
 1.03 Intr +  43569  43688  120  0  0   59   35   123 0.091   3.71
 1.04 Intr +  46583  46621   39  2  0  103   96    27 0.008   2.34
 1.05 Intr +  47054  47255  202  2  1   61   76    63 0.004   1.69
 1.06 Intr +  59763  59894  132  2  0   67   66    43 0.044   0.84
 1.07 Intr +  64901  65062  162  1  0  102   58    87 0.048   7.27
 1.08 Intr +  83767  83890  124  0  1   84  105    81 0.941   9.56
 1.09 Term +  84090  84361  272  1  2   85   45   110 0.953   2.05
 1.10 PlyA +  86084  86089    6                               1.05

 2.08 PlyA -  86532  86527    6                               1.05
 2.07 Term -  89458  89327  132  1  0   59   43   184 0.649   9.09
 2.06 Intr -  94490  94372  119  0  2   82    8    70 0.191  -1.42
 2.05 Intr - 102026 101916  111  0  0   34   52   133 0.762   4.65
 2.04 Intr - 102571 102461  111  2  0   34   84    90 0.467   3.55
 2.03 Intr - 104193 104079  115  0  1   39   38    78 0.286  -2.08
 2.02 Intr - 111572 111469  104  0  2   50  116   109 0.990   9.79
 2.01 Init - 112157 112049  109  2  1   70   88    87 0.797   7.28
 2.00 Prom - 112307 112268   40                              -6.66

 3.00 Prom + 114333 114372   40                             -11.14
 3.01 Init + 115216 115497  282  0  0   50   59   181 0.391   8.44
 3.02 Intr + 116024 116501  478  1  1   64   52   256 0.322  12.22
 3.03 Intr + 116696 116812  117  0  0   98   99    36 0.935   6.14

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  49439  49173  267  2  0   76   58   114 0.826   4.93


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815574r:21780357_21903898|GENSCAN_predicted_peptide_1|394_aa
MGKELSSYLINEDTQMRVPASPMMKGGSEGKSRLSFADIRLCGLRWEYSNVQATFGVQNE
AILSNSPFEGFHTQSQMGVECVDVGSLLEISESKRDFSLRYDSITQRPLNDSPDYIPIVM
GPDSCSQPLSGMELEVQFPVTRPQSQIGSTSSETRPRRWLEKDLRGLSGKVRNHHRGKSK
VKQLSHTTDWSLLGADEVDTVTQRLSVVIVLSQIIKNQKKGKSMLETCSHTLNWPVMGAD
EVKTVSQRRSVEIATLRVSSSVDVPVEEEVFRDCEVVAGDGSSVSTPERVCVQESGPTGI
GIESDELVTVSKRPSVAMASLKKVSSKAIDGQCGHPRKAKKNQCSPMRMGCFVLESKQCS
MILVRAPKILLQSANILSPQHTTRTHNLEFSQSI

>gi568815574r:21780357_21903898|GENSCAN_predicted_CDS_1|1185_bp
atgggtaaagagctgagcagctacctcatcaatgaagatacacagatgagagtccctgcg
agtcccatgatgaagggaggcagtgagggcaagagccggctgtcgttcgcggacatccgc
ctatgcggtctcaggtgggagtactccaacgtgcaagccacatttggagtccaaaatgag
gccatcctgtcaaattccccatttgagggctttcatacccagagccaaatgggagtggaa
tgtgttgatgttggatccttgctggagatttcagagagcaaaagagacttcagtctcagg
tatgattctatcacccagagacccctcaacgactcaccagactatattccaattgttatg
ggacccgattcctgctcacagcctctttcaggaatggagttagaagtgcagtttccagtg
accaggccacagtctcaaattggctccacctctagtgaaacccgaccaagaagatggctt
gaaaaagacctaagggggctgtctggaaaagtcaggaaccatcacagaggaaagtccaag
gtgaagcagttgtctcacaccacagactggtctctccttggtgcagatgaggttgacaca
gtgactcagaggctgtctgtggtgatagtgctctcccagataatcaagaaccaaaagaaa
ggcaagtcgatgttggagacatgttctcacactttgaactggcctgtcatgggtgcagat
gaggttaagacagtgtctcagaggcggtctgtggagattgctacccttagggtatccagt
agtgttgatgtcccggtggaggaggaggtatttcgagactgtgaggtggtcgctggagat
ggctcttctgtctccactcctgaaagagtctgtgtgcaagaatcaggtccgacggggatt
ggaatagagtctgatgagcttgtgacagtgtctaagaggccgtctgtggcgatggcaagc
ctgaaaaaggtgtccagtaaagctattgatgggcaatgtggacaccccaggaaagcaaag
aaaaatcaatgctcacctatgagaatgggctgctttgtgctggagtccaagcaatgttca
atgattcttgtcagagcaccaaaaatccttctgcaaagtgcaaacatcctcagcccccaa
cacacaaccaggacccacaacctggagttcagccagtctatctga

>gi568815574r:21780357_21903898|GENSCAN_predicted_peptide_2|266_aa
MVEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPAD
AKNAAKDMNGKVPCHKEERIMEFLHAERQYLPGEMIACQQDMMVMQLTMEIIEVPEKLGI
MLHHLEAMHTVIMVILVGMKVILEDTEIVEVPEKLGSMLHHLEAMDTVIMVILVDMKVIL
EDIGRMPPSLETQALPDPHAVLSHGPETLVHRDSRIANPKALQQPYFRKRCILLQKSHGQ
VQSGEEEDEEEEEEEEVKKKKKRKKK

>gi568815574r:21780357_21903898|GENSCAN_predicted_CDS_2|801_bp
atggtagaagcagatcatcctggcaagcttttcattggtggcctcaatagagaaaccaat
gagaagatgcttaaagcagtatttgggaaacatggtcccatatcagaagttcttttgata
aaggatcgaaccagcaaatccagaggctttgcatttattacttttgagaaccctgcagat
gctaagaatgctgccaaagatatgaatggaaaggtcccatgtcacaaagaagagagaatt
atggagttcctccacgcagagcgacaatatcttcctggagaaatgatcgcatgtcaacaa
gacatgatggttatgcaactaacgatggaaatcatcgaagttcccgagaaactagggatt
atgctccaccatctagaggccatgcataccgtgattatggtcattctcgtcgggatgaaa
gttattctagaggatacagaaatcgtcgaagttcccgagaaactagggagtatgctccac
catctagaggccatggataccgtgattatggtcattctcgtcgacatgaaagttattcta
gaggatatagggagaatgccaccctccctggagactcaggccctgccggacccacatgct
gtcctctctcatgggccggagactctggtgcacagggattcccgaatagcgaatcccaaa
gccctgcagcaaccttatttcagaaaacggtgcatattactgcagaaatcacatggacag
gtccaaagcggggaggaggaggatgaggaggaagaggaggaggaggaggtgaagaagaag
aagaagaggaagaagaagtag

>gi568815574r:21780357_21903898|GENSCAN_predicted_peptide_3|293_aa
MLVGDDIIAEMEVVAKEEGQCGATAGGPAGTAWPWPQYAPASNRLAGRPSLGARLRECPR
PQGIPGFWARAISLQLPIRDGWQQGMGAELPGAERLPGVDTCTPQGDQEKERRHTQTAAE
PVQHPAQEGLLQLRNAEQVVASHNNTPPPTPCPLLQCQPLVRAGCLGLPPPTTKTTTALM
VPSTPDRDRGPGREGALPHTLRALAKLQGVSLHAHPIIRRLLDQRQIVRHTEMLAGITND
DEVLLSYVRDGFAGKGRKATLPGTGSRMKFSFYHSLYFHNEVIIQEYCLGILX

>gi568815574r:21780357_21903898|GENSCAN_predicted_CDS_3|879_bp
atgctagtgggggatgacatcattgcagagatggaggtggtggccaaggaggaaggccaa
tgtggagccacagcaggaggacctgcaggcacagcctggccctggccccagtacgccccg
gccagcaacagactcgctggacgtccttcacttggagctcggctacgtgaatgtcccagg
ccacagggcatccccggcttctgggccagagccatatccttgcagctgccaattcgggat
ggttggcagcaggggatgggcgcggagctcccgggagcggagcggttgcctggggtggac
acgtgcacccctcagggagaccaggagaaggagagacggcacacccagacagcagcagag
cctgtccagcacccagcacaggagggcctcctgcagctcagaaacgccgagcaagtagtc
gcctcacacaacaacaccccgcccccaaccccctgcccacttcttcagtgccagcccctg
gtcagagcaggttgtctgggcctgcctccacccaccaccaagaccaccacagctctgatg
gtgccctccacgccagacagagacagaggacctggaagggaaggtgccctgccccacact
ctccgtgctcttgcaaagttgcagggtgtttccttgcacgcccacccaatcatccggcgg
ctccttgaccagaggcagattgtgcggcacaccgagatgttggccgggatcacaaatgat
gatgaagtcctgctaagctacgtacgtgatggatttgcaggtaaggggaggaaagcaact
cttccgggtaccggcagcaggatgaagttttccttttatcacagtctctacttccacaat
gaagtgatcattcaggagtactgccttggcatcctcgnn