GENSCAN 1.0 Date run: 4-Nov-116 Time: 07:44:50 Sequence gi568815574f:9489178_9527925 : 38748 bp : 45.92% C+G : Isochore 2 (43 - 51 C+G%) Parameter matrix: HumanIso.smat Predicted genes/exons: Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ 1.01 Init + 15417 15490 74 2 2 79 91 27 0.231 2.77 1.02 Intr + 17006 17174 169 2 1 76 70 124 0.276 9.35 1.03 Intr + 17565 17773 209 2 2 35 58 212 0.375 10.78 1.04 Intr + 18397 18578 182 1 2 10 44 117 0.044 -0.99 1.05 Intr + 18752 18953 202 0 1 27 -52 260 0.048 4.24 1.06 Intr + 19510 19606 97 1 1 46 78 132 0.648 8.01 1.07 Intr + 19735 19846 112 0 1 102 61 127 0.988 11.35 1.08 Intr + 19948 20093 146 2 2 76 105 191 0.980 19.60 1.09 Intr + 20200 20281 82 0 1 43 99 41 0.764 -0.09 1.10 Intr + 20550 20665 116 1 2 49 44 88 0.233 0.67 1.11 Intr + 36275 36405 131 1 2 111 43 81 0.260 5.39 1.12 Intr + 37335 37503 169 0 1 76 70 136 0.312 10.55 1.13 Term + 37771 38433 663 0 0 76 44 309 0.329 19.17 Suboptimal exons with probability > 0.800 Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ Predicted peptide sequence(s): Predicted coding sequence(s): >gi568815574f:9489178_9527925|GENSCAN_predicted_peptide_1|783_aa MANPTSAILPKPGQSCSAKQLNELSPHTPRGPMTIPCCPPSQIGSRKDMALAHKAEMLCG LGHSRSPAPSEGPPASPLTAPIPHWPKGSGPQQAQLRTGAREPEAPALGLQSPTNRHRNR CCGCGSLWVVKAAHNSVRAGRQWPTLAAGLWGRLEARRMRPEGSLTYRVPERLRQGFCGV GRAAQALVCASAKEGTAFRMEAVQEGAAGVEKSALEELLAVQVELEPVNAQARKAFSRQR EKMERRRKPQLDRRGAVIQSVPGFWANVVSFSVFLRPFYLFDLNQIANHPQMSALITDED EDMLSYMVSLEVEEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEW YPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEG TETSESMRSKAENHSVQSVALDSTAVNPTGSHPTNPMRLGSLNTQAPQPDLQIHHVAKQD FRMLSDPRRHLVCQTIYLCARTLQRIGPYTPRGPMTIPCCPPSQIGSRKDMALAHKAEML CGLGHSRSPAPSEGPPASPLTAPALGARSPADPLPARPTGVALLRTWSHTYVDPGFLRSS AGPADPALAKGLRSPAGSTAHRSSGARGPGPGLAEPHQQAPQPLLRVREPLGRQGSAQQR ARRPTMANPGGWPLVCPGHRTRGPLECSLEYSILREEAWYSEPLFASTCESVCRGSGLYS RSIPPQHRQATFLPRARPDHFPQDTPAALAPATRESSLHLLYYLRTIYLACLTKRDVSCV HDT >gi568815574f:9489178_9527925|GENSCAN_predicted_CDS_1|2352_bp atggcgaaccccacctcagcaatcctgccaaaacccgggcagtcatgttcagccaaacag ctgaatgagctcagcccccataccccccgaggcccgatgactatcccctgctgcccgcca tcccaaatcggcagccgcaaggatatggctctggctcacaaggcggagatgctctgtggc ctggggcattcacggagcccagctccaagtgaaggacctccagcgagtccattgacggcc ccgatcccgcactggccaaagggctccggtccccagcaggcccaactgcgcacaggagct cgggagccagaggccccggccctgggcttgcagagccccaccaacaggcaccgcaaccgc tgctgcgggtgcgggagcctctgggtcgtcaaggcagcgcacaacagcgtgcgcgcaggc cgacaatggccaaccctggcggctggcctctgggggcgcctggaagcccggcgcatgcgc cctgagggctcgctgacctaccgggtgccagagaggctgcggcagggtttctgtggcgtg ggtcgggcagcacaggccttggtgtgtgcgagtgccaaggagggcaccgccttcaggatg gaggctgtacaggagggggcggccggggtggagaagtctgcactggaggagctgctggcc gttcaggtggagctggagccggttaatgcccaagccaggaaggccttttctcggcagcgg gaaaagatggagcggaggcgcaagccccagctagaccgcagaggcgccgtcatccagagc gtccctggcttctgggccaatgttgtatccttctcagtgtttcttcggcctttctatctc tttgacctaaatcagattgcaaaccacccccagatgtcagccctgatcactgacgaagat gaagacatgctgagctacatggtcagcctggaggtggaagaagagaagcatcctgttcat ctctgcaagatcatgttgttctttcggagtaacccctacttccagaataaagtgattacc aaggaatatctggtgaacatcacagaatacagggcttctcattccactccaattgagtgg tatccggattatgaagtggaggcctatcgccgcagacaccacaacagcagccttaacttc ttcaactggttctctgaccacaacttcgcaggatctaacaagattgctgagatcctatgt aaggacctgtggcgcaatcccctgcaatactacaagaggatgaagccacctgaagaggga acagagacgtcagaatcaatgagaagtaaagctgaaaatcattcagttcagtctgtggca cttgattccacggctgtcaaccccaccggcagtcatcccaccaaccccatgagattgggc tccctgaatacccaggctccccagcctgacctgcaaatccatcacgtagcaaagcaggac ttccgcatgctttccgacccacgccgacatctcgtgtgccaaacaatctacctctgcgca agaactctccagaggattggcccctataccccccgaggcccgatgactatcccctgctgc ccgccatcccaaatcggcagccgcaaggatatggctctggctcacaaggcggagatgctc tgtggcctggggcattcacggagcccagctccaagtgaaggacctccagcgagtccattg acggccccggctctgggggcccgctccccagcagacccgctccctgcaagacccacgggc gtcgccctgctgagaacctggtcccacacctacgtggacccaggtttcctgaggagctcc gctggacccgcagatcccgcactggccaaagggctccggtccccagcaggctcaactgcg cacaggagctcgggagccagaggccccggccctgggcttgcagagccccaccaacaggca ccgcaaccgctgctgcgggtgcgggagcctctgggtcgtcaaggcagcgcacaacagcgt gcgcgcaggccgacaatggccaaccctggcggctggcctctggtgtgcccagggcatagg acaagaggccctttggaatgctccttggagtacagcatcctcagggaggaagcatggtac tcggagcctctatttgcctcgacctgtgagagtgtgtgccggggctctggcctctacagc agatcaattccacctcagcaccggcaggcgactttcctcccacgtgcccgccccgatcac ttcccccaggacacccctgccgcccttgccccagcaaccagagagagttctctgcatctg ctgtattacctccgtaccatctacctggcctgcctaacgaagagagatgtttcctgtgtt catgacacatag