GENSCAN 1.0	Date run:  4-Nov-116	Time: 07:44:49

Sequence gi568815574f:9400314_9487312 : 86999 bp : 46.23% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    268    383  116  2  2   49   44    88 0.036   0.67
 1.02 Intr +  64216  64346  131  0  2  111   43    81 0.144   5.39
 1.03 Intr +  65276  65444  169  2  1   76   70   124 0.212   9.35
 1.04 Intr +  65834  65998  165  1  0   46   11   167 0.069   4.96
 1.05 Intr +  66658  67205  548  0  2   39  -52   563 0.085  29.08
 1.06 Intr +  67762  67858   97  1  1   46   78   132 0.703   8.01
 1.07 Intr +  67987  68098  112  0  1  102   61   121 0.988  10.75
 1.08 Intr +  68200  68345  146  2  2   76  105   191 0.978  19.60
 1.09 Intr +  68452  68533   82  0  1   43   99    41 0.802  -0.09
 1.10 Term +  68800  68960  161  2  2   49   33    86 0.363  -2.70
 1.11 PlyA +  69419  69424    6                               1.05

 2.06 PlyA -  69525  69520    6                               1.05
 2.05 Term -  75705  75598  108  0  0  124   42    34 0.274   0.91
 2.04 Intr -  84153  84008  146  1  2  129   59    18 0.449   3.00
 2.03 Intr -  84349  84240  110  0  2   86   99    58 0.302   6.63
 2.02 Intr -  84768  84627  142  1  1   45   61    13 0.279  -6.29
 2.01 Init -  85926  85671  256  0  1   64   44   309 0.374  21.49

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815574f:9400314_9487312|GENSCAN_predicted_peptide_1|575_aa
XSMRSKAENHSVQSVALDSTAVNPTGSHPTNPMRLGSLNTQAPQPDLQIHHVAKQDFRML
SDPRRHLVCQTIYLCARTLQRIGPHTPRGPMTIPCCPPSQIGSRKDMALAHKAEMLCGLG
HSRSPAPSEGPPASPLTAPIPHWPKGSGPQQAQLRTGAREPEAPALGLQSPTNRHRNRCC
GCGSLWVVKAAHNSSLRGRLEARRMRPEGSLTYRVPERLRQGFCGVGRAAQALVCASAKE
GTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQA
VPGPGPMTPESAPEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVP
GFWANVVSFSVFLRPFYLFDLNQIANHPQMSALITDEDEDMLSYMVSLEVGEEKHPVHLC
KIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFN
WFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSESMRSKAENHSVQSVALD
STAVNPTGSHPTNPMRLGSLNVRPGHPCPKPQRTV

>gi568815574f:9400314_9487312|GENSCAN_predicted_CDS_1|1728_bp
naatcaatgagaagtaaagctgaaaatcattcagttcagtctgtggcacttgattccacg
gctgtcaaccccaccggcagtcatcccaccaaccccatgagattgggctccctgaatacc
caggctccccagcctgacctgcaaatccatcacgtagcaaagcaggacttccgcatgctt
tccgacccacgccgacatctcgtgtgccaaacaatctacctctgcgcaagaactctccag
aggattggcccccataccccccgaggcccgatgactatcccctgctgcccgccatcccaa
atcggcagccgcaaggatatggctctggctcacaaggcggagatgctctgtggcctgggg
cattcacggagcccagctccaagtgaaggacctccagcgagtccattgacggccccgatc
ccgcactggccaaagggctccggtccccagcaggctcaactgcgcacaggagctcgggag
ccagaggccccggccctgggcttgcagagccccaccaacaggcaccgcaaccgctgctgc
gggtgcgggagcctctgggtcgtcaaggcagcgcacaacagctcccttagggggcgcctg
gaagcccggcgcatgcgccctgagggctcgctgacctaccgggtgccagagaggctgcgg
cagggtttctgtggcgtgggtcgggcagcacaggccttggtgtgtgcgagtgccaaggag
ggcaccgccttcaggatggaggctgtgcaggagggggcggccggggtggagagtgagcag
gcggctttgggggaggaggcggtgctgctgttggatgacataatggcggaggtggaggtg
gtggcggaggaggagggcctcgtggagcggcgggaggaggcccagcgggcacagcaggct
gtgcctggccctgggcccatgaccccagagtctgcaccggaggagctgctggccgttcag
gtggagctggagccggttaatgcccaagccaggaaggccttttctcggcagcgggaaaag
atggagcggaggcgcaagccccacctagaccgcagaggcgccgtcatccagagcgtccct
ggcttctgggccaatgttgtatccttctcagtgtttcttcggcctttctatctctttgac
ctaaatcagattgcaaaccacccccagatgtcagccctgatcactgacgaagatgaagac
atgctgagctacatggtcagcctggaggtgggagaagagaagcatcctgttcatctctgc
aagatcatgttgttctttcggagtaacccctacttccagaataaagtgattaccaaggaa
tatctggtgaacatcacagaatacagggcttctcattccactccaattgagtggtatccg
gattatgaagtggaggcctatcgccgcagacaccacaacagcagccttaacttcttcaac
tggttctctgaccacaacttcgcaggatctaacaagattgctgagatcctatgtaaggac
ctgtggcgcaatcccctgcaatactacaagaggatgaagccacctgaagagggaacagag
acgtcagaatcaatgagaagtaaagctgaaaatcattcagttcagtctgtggcacttgat
tccacggctgtcaaccccaccggcagtcatcccaccaaccccatgagattgggctccctg
aatgtgcgtcctggtcatccttgccccaaaccacaaaggactgtttag

>gi568815574f:9400314_9487312|GENSCAN_predicted_peptide_2|253_aa
MLERTAGVQSKEAALEEEAVLKVEDIMAEVEVVVEVEPDVGWQKEGQRAQPGPGPSTPGP
SMDSLEVLHLELGSVNAPGHRASPPYRDRGPTMKGDWPNVWEMALFHIVCVLAKLQGVTR
LAHPILWRVLAQRWRNSAIPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQ
RFWDHEGQASSCRQYTSYLSSFSCLAEHDCPGFGRIAEDTGRLAPLQSSGSRVMQVKARV
SRRSLPELLQLVV

>gi568815574f:9400314_9487312|GENSCAN_predicted_CDS_2|762_bp
atgctggagaggacggccggggtacagagcaaggaggcggccttggaagaggaggcggtg
ctgaaggtggaagacatcatggctgaggtggaggtggtggttgaggtggagcccgacgtg
gggtggcagaaggagggccagcgggcacagcctggccctggaccgagcacaccggggccg
tcaatggactcgctggaggtccttcacttggagctgggctccgtgaatgccccaggccac
agagcatctccgccttacagagatagagggccaacaatgaagggtgactggccaaatgtc
tgggagatggccctgttccacattgtctgtgttcttgcgaaattgcaaggcgtcacgagg
cttgcccacccaatcctctggagagttcttgcgcagaggtggaggaactcagccatcccg
gttaccggtggcaggatgatttcctttcatcccaacctttatttccacagtgaaatcatc
atgaaggagcactgtgttggcatcctcggctacagggtgtctcattccactgcagtccag
cggttctgggatcacgaaggtcaagcctccagctgcaggcagtacacctcctacctgagc
tcattcagctgtttggctgaacatgactgcccgggttttggcaggattgctgaggataca
gggcgactggctccactgcagtccagtggttctagggtcatgcaggtgaaagcccgagtt
tcccgcaggtcactgcctgagcttcttcagctggttgtctga