GENSCAN 1.0	Date run:  4-Nov-116	Time: 07:44:44

Sequence gi568815574f:6146269_6266592 : 120324 bp : 38.30% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -    596    591    6                               1.05
 1.01 Sngl -   3096   2083 1014  0  0   44   38   476 0.813  34.96
 1.00 Prom -  18922  18883   40                              -5.35

 2.00 Prom +  22248  22287   40                              -5.75
 2.01 Init +  23883  23955   73  2  1   80  108    31 0.842   5.58
 2.02 Term +  28886  28995  110  0  2   32   37   147 0.794   1.69
 2.03 PlyA +  29493  29498    6                               1.05

 3.05 PlyA -  35622  35617    6                               1.05
 3.04 Term -  48695  48507  189  2  0   43   42   165 0.214   3.87
 3.03 Intr -  59297  59118  180  2  0   19   94   110 0.342   3.84
 3.02 Intr -  59870  59746  125  0  2   38   37   117 0.234   0.98
 3.01 Init -  77973  77469  505  0  1   39   38   247 0.049   9.99
 3.00 Prom -  83143  83104   40                              -7.75

 4.00 Prom +  85448  85487   40                              -1.05
 4.01 Init +  91862  91965  104  1  2   56  103    22 0.144   0.27
 4.02 Intr +  97608  97780  173  0  2   72   81   129 0.632   9.26
 4.03 Intr +  98602  98762  161  2  2   96   45   155 0.746  10.79
 4.04 Intr +  99142  99516  375  0  0   44   62   303 0.727  17.59
 4.05 Intr +  99971 100518  548  1  2   43  -52   446 0.745  16.85
 4.06 Intr + 101069 101165   97  2  1   68   78   110 0.773   7.09
 4.07 Intr + 101294 101405  112  1  1  102   61   106 0.963   8.33
 4.08 Intr + 101507 101652  146  0  2   76  105   108 0.970  10.38
 4.09 Intr + 101759 101840   82  1  1   43   99    45 0.947  -0.61
 4.10 Intr + 102109 102224  116  2  2   49   44   140 0.884   4.95
 4.11 Term + 104137 104328  192  0  0   73   44   131 0.591   3.64
 4.12 PlyA + 105648 105653    6                              -1.75

 5.09 PlyA - 106112 106107    6                               1.05
 5.08 Term - 108938 108722  217  1  1  -10   47   219 0.599   3.63
 5.07 Intr - 109034 108961   74  2  2  124   43    64 0.525   2.79
 5.06 Intr - 116632 116561   72  1  0   38   88    67 0.495   0.38
 5.05 Intr - 117479 117334  146  0  2  129   59    67 0.793   6.98
 5.04 Intr - 117675 117566  110  2  2   81   99    68 0.754   6.21
 5.03 Intr - 118208 117953  256  0  1  108   61    33 0.667  -1.82
 5.02 Intr - 118790 118578  213  0  0  -17   44   197 0.326   2.56
 5.01 Intr - 119589 118997  593  2  2   78   44   365 0.091  22.41

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815574f:6146269_6266592|GENSCAN_predicted_peptide_1|337_aa
MVKGSIQQEEVTILNTYAPNTGAPRYIKQVLSDLQRDLDYQTIIMGDFNTPVSTLDRSTR
QKVNKDTQELNSTLHQADLIDIHRTLHPKSTEYTFFSALYHTYSKIDHIVGSKALLSKCK
RTEIITNCLSDHSAIKLELRIKKLTQNRSTTWKLNNLLLNDYWAHNEMKAEIKMFFETNE
NKDTTYQNLWDTFKALCRGKFLALNAHKRKQEKSKIDTLTSQLKELEKQEQTHSKASRRQ
EITKIRAELKEIETQKTLQKINESRSWFFERINKIDRQLARLIKKKREKNQIDAIKNDQG
DITTDPTEIQTTIREYYKQLYANKLENLEEMDKFLDT

>gi568815574f:6146269_6266592|GENSCAN_predicted_CDS_1|1014_bp
atggtaaagggatcaattcaacaagaagaggtaactatcctaaatacatatgcacccaat
acaggagcacccagatacataaagcaagtcctgagtgacctacaaagagacttagactac
caaacaataataatgggagactttaacaccccagtgtcaacattggacagatcaacgaga
cagaaagttaacaaggatacccaggaattaaactcaacgctgcaccaagcggacctaata
gacatccacagaactctccaccccaaatcaacagaatatacatttttttcagcactgtac
cacacctattccaaaattgaccacatagttggaagtaaagctctcctcagcaaatgtaaa
agaacagaaattataacaaactgtctctcagaccacagtgcaatcaaactagaactcagg
attaagaaactcactcaaaaccgctcaactacatggaaactgaacaacctgctcctgaat
gactactgggcacataacgaaatgaaggcagaaataaagatgttctttgaaaccaacgag
aacaaagacacaacataccagaatctctgggacacattcaaagcattgtgtagagggaaa
tttctagcactaaatgcccacaagagaaagcaggaaaaatccaaaattgacaccctaaca
tcacaattaaaagaactagaaaagcaagagcaaacacattcaaaagctagcagaaggcaa
gaaataactaaaatcagagcagaactgaaggaaatagagacacaaaaaacccttcaaaaa
attaatgaatccaggagctggttttttgaaaggatcaacaaaattgatagacagctagca
agactaataaagaaaaaaagagagaagaatcaaatagatgcaataaaaaatgatcaaggg
gatatcaccaccgaccccacagaaatacaaactaccatcagagaatactacaaacaactc
tacgcaaataaactagaaaatctagaagaaatggataaattcctcgacacatag

>gi568815574f:6146269_6266592|GENSCAN_predicted_peptide_2|60_aa
MAPASAPSKGLRKISVMAKCERGAIIKLLDPLKTYSKTCSDFGKHREPVDAQGAVEPLVI

>gi568815574f:6146269_6266592|GENSCAN_predicted_CDS_2|183_bp
atggcaccagcatctgcccctagcaagggcctcaggaagatttcagtcatggcaaaatgt
gaaaggggagcaatcatcaaactactagatcccctgaaaacatactccaaaacctgctct
gactttggcaagcacagggaaccagtggatgcccagggagctgtggaacccctggtgatc
taa

>gi568815574f:6146269_6266592|GENSCAN_predicted_peptide_3|332_aa
MYGKAWVPTKRPAPQADALQNTFDGAVWKGSMGLDTPQRVPIMALPSGAVETELQPSRPQ
SGRSIDSLHPELGKATDTQLQPMRVATGATSCKAIWVELPKAFRTHPLHQCTLDVGHGFK
DYFGALRIKVCPAGFQTSGGPIAPFYWLFSLFWNGNAYSMPVPPLHLARVVWSGEALWTL
VEREHRNFEALNSVLSCYSRKENQTKLSGQILDDVSIKPWARGEHTAFEKNYPLQAACIT
EETLGSKQPTAIPRYYIEGIGCASETCWLQDLVPCILALAKRCQHKAQAVASEEANPKPW
QLKRDIGPVGAEKLRIEVWEPPPRFQRMYGNT

>gi568815574f:6146269_6266592|GENSCAN_predicted_CDS_3|999_bp
atgtatggaaaagcctgggttcccacaaagaggcctgctccacaggcagatgcccttcag
aatacatttgatggggcagtgtggaagggaagtatggggttggacaccccacagagagtc
cccattatggcactgcctagtggagctgtggaaacagagctgcagccttctagaccccaa
agtggtagatccattgacagcttgcaccctgagcttggaaaagccacagacactcaactt
caacccatgagagtagcaacaggggctacatcatgcaaagccatatgggtagagctgccc
aaggcctttcgaacccaccccctgcatcagtgtaccctagatgtgggacatggattcaag
gattattttggagctttaagaattaaagtctgccctgctgggtttcagacttctgggggg
cctattgcccctttctattggctattttctctattttggaatgggaatgcctactcaatg
cctgtaccaccattgcatcttgcaagagtggtgtggagtggagaggctctctggacactg
gtggagagagaacacagaaattttgaagcattaaactcggtgctttcctgttacagcaga
aaggaaaaccagactaaactcagtggacagatcctagatgatgtttctataaaaccctgg
gccagaggagaacacactgcatttgaaaaaaattatccacttcaggcagcatgcataact
gaggagaccttgggttctaaacaaccaacagctatacccaggtactacatcgagggcatt
gggtgtgcctctgagacctgttggcttcaggacttggtgccctgcatcctagccttggct
aaaagatgccaacataaagctcaggctgttgcttcagaagaagcaaaccctaagccttgg
cagctaaaacgtgatattgggcctgtgggtgcagaaaagttaagaattgaggtttgggaa
cctccacctagatttcagaggatgtatggaaacacctga

>gi568815574f:6146269_6266592|GENSCAN_predicted_peptide_4|701_aa
MPWQAGIISCGSQVYSGSIVSSSWVLIAAHCVRNMSTSGVPNNLHLVKESPDDSVGKPPD
ACNSARAQRMWSRDISQTFGLSRSDVDPLFLSAPMPPRSPMPIPCCQPSGIGSCKDMALS
QKPRPQGHSRSLPPSEGPPASPLMAWMAALAVGLRTTAGSTAHRSSEARGRGPVLPEPHQ
QAPQRLLRVREPLGRQGSAQQRARRPTMANPGGWPLVCPGHRTRGPLECSLEYSILREEA
WYSEPVFASTCESTCQGSSLQCRRIPPLHKQSLRGRLEARRMRPEGSLTYRVPERLRQGS
CGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAE
EEGLVERREEAQRAQQAVPGPGPMTPESALEELLAVQVELEPVNAQARKAFSRQREKMER
RRKPHLDRRGAVIQSVPGFWANVVSFSVFLRPFYLFDLNQIANHPQMSALITDEDEDMLS
YMVSLEVEEEKHRVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYE
VEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSE
SMRSKAENHSVQSVALDSTAVNPTGSHPTNPMRLGSLNTSEALERESCPPLTTVPLTHKH
RRNRCSKQIILKTVGTLWPPQAALYPTVCMSKTLWSSTVSL

>gi568815574f:6146269_6266592|GENSCAN_predicted_CDS_4|2106_bp
atgccttggcaggctgggatcatcagctgtggcagtcaggtctacagcgggtccatagtt
agcagctcatgggttctcatagctgcccactgtgtcaggaacatgtcaacatctggtgtg
ccaaacaatctacatctggtcaaggagtctccagatgattcagtgggcaagcctcctgac
gcctgcaattctgcaagagcacagagaatgtggagcagggatatctcccagacatttggc
ctgtcacgctccgatgttgatcctctgtttctgtctgcccccatgcccccacgaagcccg
atgcccatcccctgctgccagccatctggaatcggcagctgcaaggatatggctctgtcc
cagaagcccaggccacaggggcattcacggagtctacctccaagtgaaggacctccagcg
agtccattgatggcctggatggccgcactcgccgtggggctcaggaccacagcagggtca
actgcgcataggagctcagaagccagaggccgaggccctgtgcttccagagccccaccag
caggcaccgcagcggctgctgcgggtgcgggagcctctgggtcgtcaaggcagtgcacaa
cagcgtgcgcgcaggccgacaatggccaaccctggcggctggcctctggtgtgcccaggg
cacaggactagaggccctttggaatgctccttggagtacagcatcctcagggaggaagca
tggtactcggagcctgtatttgcctcgacctgcgagagtacatgccagggttctagccta
cagtgcagacgaattccacctctgcacaagcagtcccttagggggcgcctggaagcccgg
cgcatgcgccctgagggctcgctgacctaccgggtgccagagaggctgcggcagggttcc
tgtggcgtgggtcgggcagcacaggccttggtgtgtgcgagtgccaaggagggcaccgcc
ttcaggatggaggctgtgcaggagggggcggccggggtggagagtgagcaggcggctttg
ggggaggaggcggtgctgctgttggatgacataatggcggaggtggaggtggtggcggag
gaggagggcctcgtggagcggcgggaggaggcccagcgggcacagcaggctgtgcctggc
cctgggcccatgaccccagagtctgcactggaggagctgctggccgttcaggtggagctg
gagccggttaatgcccaagccaggaaggccttttctcggcagcgggaaaagatggagcgg
aggcgcaagccccacctagaccgcagaggcgccgtcatccagagcgtccctggcttctgg
gccaatgttgtatccttctcagtgtttcttcggcctttctatctctttgacctaaatcag
attgcaaaccacccccagatgtcagccctgatcactgacgaagatgaagacatgctgagc
tacatggtcagcctggaggtggaagaagagaagcatcgtgttcatctctgcaagatcatg
ttgttctttcggagtaacccctacttccagaataaagtgattaccaaggaatatctggtg
aacatcacagaatacagggcttctcattccactccaattgagtggtatccggattatgaa
gtggaggcctatcgccgcagacaccacaacagcagccttaacttcttcaactggttctct
gaccacaacttcgcaggatctaacaagattgctgagatcctatgtaaggacctgtggcgc
aatcccctgcaatactacaagaggatgaagccacctgaagagggaacagagacgtcagaa
tcaatgagaagtaaagctgaaaatcattcagttcagtctgtggcacttgattccacggct
gtcaaccccaccggcagtcatcccaccaaccccatgagattgggctccctgaatacctct
gaagctctggagcgggagtcttgtcctcctctgactaccgtccccctgacccacaaacac
aggagaaacaggtgttctaagcaaattattctgaaaacagtcggaaccctttggccccct
caagctgccctctatcctactgtgtgcatgtcaaagacactgtggtccagtacggtatcc
ctatag

>gi568815574f:6146269_6266592|GENSCAN_predicted_peptide_5|560_aa
XSGCGACWWGSASPGPGLWLPSSCAQLSLLGTGALWPVRDLRVQRRSSGNLGPRRCGTRF
SAGRRPWVLQGAGLLGSGPPEPTGAGHGLGWAGLRRPRVCGSTQEKTVFRLEAMLERTAG
VQSKEAALEEEAVLKVEDIMAEVEVVVEVEPDVGWQKEGQRAQPGPGPSTPGPSMDSLEV
LHLELGSVNAPGHRASPPSLGARGREGEPGPALTRENRSAKVPLRTAQIRRTRFPGNVPG
GRGICMPLPAIEPPLLSVPVSSRLTPETQAATTCPLFLRPVYGQPRPSWPVSTHSKNHHS
CGVASSPDRDRGPTMKGDWPNVWEMALFHIVCVLAKLQGVTRLAHPILWRVLAQRWRNSA
IPVTGGRMISFHPNLYFHSEIIMKEHCVGILGYRVSHSTAVQRFWDHEGQASSCRQYTSY
LSSFSCLAEHDCPGFGRIAELVHLTRNLEDHTGLQCEAMFYFLQDTGRLAPLQSSGSRVM
QVKARVSRSWLSDCEGPGYGTIAEVGQLWGIMAKDLLRHSLASEELALNQNLTCHDQFAQ
STRSSARACGSIFCSTTQGS

>gi568815574f:6146269_6266592|GENSCAN_predicted_CDS_5|1683_bp
nncagcggttgcggtgcctgttggtggggctctgcaagcccagggccggggctctggctc
ccgagctcctgtgcgcagttgagcctgctggggaccggagccctttggccagtgcgggat
ctgcgggtccagcggaggtcctcaggaaacctgggtccacgtaggtgtgggaccaggttc
tcagcagggcgacgcccgtgggtcttgcagggagcgggtctgctggggagcgggccccca
gagcctacgggtgcggggcatgggctgggctgggctgggctgcgcaggcccagggtctgt
gggagcacccaggagaaaaccgtgttcaggctggaggcaatgctggagaggacggccggg
gtacagagcaaggaggcggccttggaagaggaggcggtgctgaaggtggaagacatcatg
gctgaggtggaggtggtggttgaggtggagcccgacgtggggtggcagaaggagggccag
cgggcacagcctggccctggaccgagcacaccggggccgtcaatggactcgctggaggtc
cttcacttggagctgggctccgtgaatgccccaggccacagagcatctccgccttccctg
ggagcacgtggtagggaaggggagccagggccagcactgacaagggagaatcgcagcgcc
aaggtccctttgcgcacagcccaaattcgaaggacacgtttccctgggaacgtccctgga
ggacggggaatctgtatgccattaccagccattgaaccacccctgctctcggtgcctgtt
tccagcaggctcaccccagaaacacaagctgcaaccacctgcccactttttctgcgtccc
gtctatggtcagcccaggccgtcttggccggtgtccacccactccaaaaaccaccacagt
tgtggcgttgcctcctcgccagacagagatagagggccaacaatgaagggtgactggcca
aatgtctgggagatggccctgttccacattgtctgtgttcttgcgaaattgcaaggcgtc
acgaggcttgcccacccaatcctctggagagttcttgcgcagaggtggaggaactcagcc
atcccggttaccggtggcaggatgatttcctttcatcccaacctttatttccacagtgaa
atcatcatgaaggagcactgtgttggcatcctcggctacagggtgtctcattccactgca
gtccagcggttctgggatcacgaaggtcaagcctccagctgcaggcagtacacctcctac
ctgagctcattcagctgtttggctgaacatgactgcccgggttttggcaggattgctgag
ttagtccacctcacacggaatctggaggaccacactgggctccagtgtgaggcaatgttt
tattttcttcaggatacagggcgactggctccactgcagtccagtggttctagggtcatg
caggtgaaagcccgagtttcccgcagctggttgtctgactgtgagggcccaggttacggc
acgattgctgaggtggggcagctatggggcatcatggcaaaggaccttcttcgacattcc
ttggcatcggaggaattggctttgaaccagaacctgacctgtcacgaccaatttgcccag
tccaccagatcatcagccagggcctgtggctctatattctgcagcactacccaagggagt
tag