(Linear) (Six-base) MAPSORT of: KIEE0448.seq Check: 1982 from: 1 to: 471
KIEE0448.orf
With 182 enzymes: SgfI *
April 24, 2009 13:14 ..
Acc65I G'GTAC_C
Cuts at: 0 33 62 471
Size: 33 29 409
Fragments arranged by size:
409 33 29
AcuI CTGAAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 390 471
Size: 390 81
AloI GAACnnnnnnTCCnnnnnnn_nnnnn'
Cuts at: 0 67 99 471
Size: 67 32 372
Fragments arranged by size:
372 67 32
BamHI G'GATC_C
Cuts at: 0 330 471
Size: 330 141
BanI G'GyrC_C
Cuts at: 0 33 62 99 471
Size: 33 29 37 372
Fragments arranged by size:
372 37 33 29
BpmI CTGGAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 124 471
Size: 124 347
BpuEI CTTGAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 169 471
Size: 169 302
BsaXI ACnnnnnCTCCnnnnnnn_nnn'
Cuts at: 0 67 97 471
Size: 67 30 374
Fragments arranged by size:
374 67 30
BseRI GAGGAGnnnnnnnn_nn'
Cuts at: 0 31 91 471
Size: 31 60 380
Fragments arranged by size:
380 60 31
BsiEI CG_ry'CG
Cuts at: 0 174 471
Size: 174 297
BsrBI CCG'CTC
Cuts at: 0 21 471
Size: 21 450
BsrFI r'CCGG_y
Cuts at: 0 146 471
Size: 146 325
BssHII G'CGCG_C
Cuts at: 0 114 471
Size: 114 357
BstYI r'GATC_y
Cuts at: 0 179 330 471
Size: 179 151 141
Fragments arranged by size:
179 151 141
BtgI C'CryG_G
Cuts at: 0 49 471
Size: 49 422
EaeI y'GGCC_r
Cuts at: 0 171 471
Size: 171 300
EagI C'GGCC_G
Cuts at: 0 171 471
Size: 171 300
Eco57MI CTGrAGnnnnnnnnnnnnnn_nn'
Cuts at: 0 124 390 471
Size: 124 266 81
Fragments arranged by size:
266 124 81
EcoO109I rG'GnC_Cy
Cuts at: 0 44 471
Size: 44 427
EcoRV GAT'ATC
Cuts at: 0 126 471
Size: 126 345
HaeII r_GCGC'y
Cuts at: 0 160 471
Size: 160 311
Hin4I GAynnnnnvTCnnnnnnnn_nnnnn'
Cuts at: 0 404 436 471
Size: 404 32 35
Fragments arranged by size:
404 35 32
HindIII A'AGCT_T
Cuts at: 0 361 471
Size: 361 110
KpnI G_GTAC'C
Cuts at: 0 37 66 471
Size: 37 29 405
Fragments arranged by size:
405 37 29
MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn'
Cuts at: 0 277 471
Size: 277 194
MspA1I CmG'CkG
Cuts at: 0 328 471
Size: 328 143
NaeI GCC'GGC
Cuts at: 0 148 471
Size: 148 323
NgoMIV G'CCGG_C
Cuts at: 0 146 471
Size: 146 325
NotI GC'GGCC_GC
Cuts at: 0 171 471
Size: 171 300
NspI r_CATG'y
Cuts at: 0 154 471
Size: 154 317
PflMI CCAn_nnn'nTGG
Cuts at: 0 72 471
Size: 72 399
PpiI GAACnnnnnCTCnnnnnnnn_nnnnn'
Cuts at: 0 67 99 471
Size: 67 32 372
Fragments arranged by size:
372 67 32
PpuMI rG'GwC_Cy
Cuts at: 0 44 471
Size: 44 427
SanDI GG'GwC_CC
Cuts at: 0 44 471
Size: 44 427
SmlI C'TyrA_G
Cuts at: 0 184 463 471
Size: 184 279 8
Fragments arranged by size:
279 184 8
StyI C'CwwG_G
Cuts at: 0 71 334 471
Size: 71 263 137
Fragments arranged by size:
263 137 71
TaqII GACCGAnnnnnnnnn_nn'
Cuts at: 0 327 471
Size: 327 144
TstI CACnnnnnnTCCnnnnnnn_nnnnn'
Cuts at: 0 115 147 471
Size: 115 32 324
Fragments arranged by size:
324 115 32
Enzymes that do cut:
Acc65I AcuI AloI BamHI BanI BpmI BpuEI BsaXI
BseRI BsiEI BsrBI BsrFI BssHII BstYI BtgI EaeI
EagI Eco57MI EcoO109I EcoRV HaeII Hin4I HindIII KpnI
MmeI MspA1I NaeI NgoMIV NotI NspI PflMI PpiI
PpuMI SanDI SmlI StyI TaqII TstI
Enzymes that do not cut:
AarI AatII AccI AclI AfeI AflII AflIII AgeI
AhdI AleI AlfI AlwNI ApaI ApaLI ApoI AscI
AseI AsiSI AvaI AvrII BaeI BanII BbeI BbsI
BbvCI BcgI BciVI BclI BfrBI BglI BglII BlpI
Bme1580I BmgBI BmrI BmtI BplI Bpu10I BsaI BsaAI
BsaBI BsaHI BsaWI BseYI BsgI BsiHKAI BsiWI BsmI
BsmBI Bsp1286I BspEI BspHI BspMI BsrDI BsrGI BssSI
BstAPI BstBI BstEII BstXI BstZ17I Bsu36I BtgZI BtsI
ClaI CspCI DraI DraIII DrdI EarI EciI EcoICRI
EcoNI EcoRI FalI FseI FspI FspAI HincII HpaI
KasI MfeI MluI MscI MslI NarI NcoI NdeI
NheI NruI NsiI PacI PasI PciI PfoI PmeI
PmlI PshAI PsiI PspOMI PspXI PsrI PstI PvuI
PvuII RsrII SacI SacII SalI SapI SbfI ScaI
SexAI SfcI SfiI SfoI SgfI SgrAI SmaI SnaBI
SpeI SphI SrfI SspI StuI SwaI TatI Tth111I
XbaI XcmI XhoI XmaI XmnI ZraI