seq1 = pF1KB8274.tfa, 306 bp
seq2 = pF1KB8274/gi568815586f_6666706.tfa (gi568815586f:6666706_6870439), 203734 bp

>pF1KB8274 306
>gi568815586f:6666706_6870439 (Chr12)

1-45  (100001-100045)   100% ->
46-117  (102898-102969)   100% ->
118-196  (103216-103294)   100% ->
197-258  (103452-103513)   100% ->
259-306  (103687-103734)   100%

      0     .    :    .    :    .    :    .    :    .    :
      1 ATGTCGGAGAAAAGCGTGGAGGCAGCGGCCGAGTTGAGCGCCAAG     
        |||||||||||||||||||||||||||||||||||||||||||||>>>..
 100001 ATGTCGGAGAAAAGCGTGGAGGCAGCGGCCGAGTTGAGCGCCAAGGTA..

     50     .    :    .    :    .    :    .    :    .    :
     46     GACCTGAAGGAGAAGAAGGAGAAGGTGGAGGAGAAGGCAAGCCGGA
        .>>>||||||||||||||||||||||||||||||||||||||||||||||
 100051 .CAGGACCTGAAGGAGAAGAAGGAGAAGGTGGAGGAGAAGGCAAGCCGGA

    100     .    :    .    :    .    :    .    :    .    :
     92 AAGAGCGAAAGAAAGAAGTGGTGGAG         GAGGAGGAGAACGGG
        ||||||||||||||||||||||||||>>>...>>>|||||||||||||||
 102944 AAGAGCGAAAGAAAGAAGTGGTGGAGGTG...CAGGAGGAGGAGAACGGG

    150     .    :    .    :    .    :    .    :    .    :
    133 GCTGAGGAGGAAGAAGAAGAAACTGCCGAGGATGGAGAGGAGGAAGATGA
        ||||||||||||||||||||||||||||||||||||||||||||||||||
 103231 GCTGAGGAGGAAGAAGAAGAAACTGCCGAGGATGGAGAGGAGGAAGATGA

    200     .    :    .    :    .    :    .    :    .    :
    183 AGGGGAAGAAGAAG         ATGAGGAAGAAGAAGAAGAGGATGATG
        ||||||||||||||>>>...>>>|||||||||||||||||||||||||||
 103281 AGGGGAAGAAGAAGGTG...CAGATGAGGAAGAAGAAGAAGAGGATGATG

    250     .    :    .    :    .    :    .    :    .    :
    224 AAGGGCCCGCGCTGAAGAGAGCTGCCGAAGAGGAG         GATGAA
        |||||||||||||||||||||||||||||||||||>>>...>>>||||||
 103479 AAGGGCCCGCGCTGAAGAGAGCTGCCGAAGAGGAGGTT...CAGGATGAA

    300     .    :    .    :    .    :    .    :
    265 GCGGATCCCAAACGGCAGAAGACAGAAAATGGGGCATCGGCG
        ||||||||||||||||||||||||||||||||||||||||||
 103693 GCGGATCCCAAACGGCAGAAGACAGAAAATGGGGCATCGGCG