seq1 = pF1KB6739.tfa, 294 bp
seq2 = pF1KB6739/gi568815594r_75922364.tfa (gi568815594r:75922364_76123431), 201068 bp

>pF1KB6739 294
>gi568815594r:75922364_76123431 (Chr4)

(complement)

1-61  (100001-100061)   100% ->
62-188  (100615-100741)   100% ->
189-278  (100977-101066)   100% ->
279-294  (101484-101499)   100%

      0     .    :    .    :    .    :    .    :    .    :
      1 ATGAATCAAACTGCCATTCTGATTTGCTGCCTTATCTTTCTGACTCTAAG
        ||||||||||||||||||||||||||||||||||||||||||||||||||
 100001 ATGAATCAAACTGCCATTCTGATTTGCTGCCTTATCTTTCTGACTCTAAG

     50     .    :    .    :    .    :    .    :    .    :
     51 TGGCATTCAAG         GAGTACCTCTCTCTAGAACTGTACGCTGTA
        |||||||||||>>>...>>>||||||||||||||||||||||||||||||
 100051 TGGCATTCAAGGTA...CAGGAGTACCTCTCTCTAGAACTGTACGCTGTA

    100     .    :    .    :    .    :    .    :    .    :
     92 CCTGCATCAGCATTAGTAATCAACCTGTTAATCCAAGGTCTTTAGAAAAA
        ||||||||||||||||||||||||||||||||||||||||||||||||||
 100645 CCTGCATCAGCATTAGTAATCAACCTGTTAATCCAAGGTCTTTAGAAAAA

    150     .    :    .    :    .    :    .    :    .    :
    142 CTTGAAATTATTCCTGCAAGCCAATTTTGTCCACGTGTTGAGATCAT   
        |||||||||||||||||||||||||||||||||||||||||||||||>>>
 100695 CTTGAAATTATTCCTGCAAGCCAATTTTGTCCACGTGTTGAGATCATGTG

    200     .    :    .    :    .    :    .    :    .    :
    189       TGCTACAATGAAAAAGAAGGGTGAGAAGAGATGTCTGAATCCAG
        ...>>>||||||||||||||||||||||||||||||||||||||||||||
 100745 ...CAGTGCTACAATGAAAAAGAAGGGTGAGAAGAGATGTCTGAATCCAG

    250     .    :    .    :    .    :    .    :    .    :
    233 AATCGAAGGCCATCAAGAATTTACTGAAAGCAGTTAGCAAGGAAAG    
        ||||||||||||||||||||||||||||||||||||||||||||||>>>.
 101021 AATCGAAGGCCATCAAGAATTTACTGAAAGCAGTTAGCAAGGAAAGGTA.

    300     .    :    .    :
    279      GTCTAAAAGATCTCCT
        ..>>>||||||||||||||||
 101071 ..CAGGTCTAAAAGATCTCCT