# 0 Query: pF1KE2676, 1462 aa
# 1 CCDS14214.1 POLA1 gene_id:5422|Hs108|chrX (1462 aa)
# 2 CCDS83462.1 POLA1 gene_id:5422|Hs108|chrX (1468 aa)
# 3 CCDS82381.1 POLD1 gene_id:5424|Hs108|chr19 (1133 aa)
# 4 CCDS12795.1 POLD1 gene_id:5424|Hs108|chr19 (1107 aa)
# 5 CCDS69177.1 REV3L gene_id:5980|Hs108|chr6 (3052 aa)
//
exp sw-scr id% from to
1 0 9745 100.0 1 1462
2 0 9719 99.5 1 1468
3 3.9e-20 748 27.6 254 1010
4 9.8e-19 757 27.3 254 984
5 3.7e-18 534 21.4 2115 3048
//
0 ( 1) MAPVHGDD------SLSDSGSFVSSRARREKKSKKGRQEALERLKKAKAGEKYKYEVEDF
1 ( 1) MAPVHGDD------SLSDSGSFVSSRARREKKSKKGRQEALERLKKAKAGEKYKYEVEDF
2 ( 1) MAPVHGDDCEIGASALSDSGSFVSSRARREKKSKKGRQEALERLKKAKAGEKYKYEVEDF
3 ( -) ............................................................
4 ( -) ............................................................
5 ( -) ............................................................
//
0 ( 55) TGVYEEVDEEQYSKLVQARQDDDWIVDDDGIGYVEDGREIFDDDLEDDALDADEKGKDGK
1 ( 55) TGVYEEVDEEQYSKLVQARQDDDWIVDDDGIGYVEDGREIFDDDLEDDALDADEKGKDGK
2 ( 61) TGVYEEVDEEQYSKLVQARQDDDWIVDDDGIGYVEDGREIFDDDLEDDALDADEKGKDGK
3 ( -) ............................................................
4 ( -) ............................................................
5 ( -) ............................................................
//
0 ( 115) ARNKDKRNVKKLAVTKPNNIKSMFIACAGKKTADKAVDLSKDGLLGDILQDLNTETPQIT
1 ( 115) ARNKDKRNVKKLAVTKPNNIKSMFIACAGKKTADKAVDLSKDGLLGDILQDLNTETPQIT
2 ( 121) ARNKDKRNVKKLAVTKPNNIKSMFIACAGKKTADKAVDLSKDGLLGDILQDLNTETPQIT
3 ( -) ............................................................
4 ( -) ............................................................
5 ( -) ............................................................
//
0 ( 175) PPPVMILKKKRSIGASPNPFSVHTATAVPSGKIASPVSRKEPPLTPVPLKRAEFAGDDVQ
1 ( 175) PPPVMILKKKRSIGASPNPFSVHTATAVPSGKIASPVSRKEPPLTPVPLKRAEFAGDDVQ
2 ( 181) PPPVMILKKKRSIGASPNPFSVHTATAVPSGKIASPVSRKEPPLTPVPLKRAEFAGDDVQ
3 ( -) ............................................................
4 ( -) ............................................................
5 ( -) ............................................................
//
0 ( 235) VESTEEEQESGAMEFEDGDFDEPMEVEEVDLEPMAAKAWDKESEPAEEVKQEADSGKGTV
1 ( 235) VESTEEEQESGAMEFEDGDFDEPMEVEEVDLEPMAAKAWDKESEPAEEVKQEADSGKGTV
2 ( 241) VESTEEEQESGAMEFEDGDFDEPMEVEEVDLEPMAAKAWDKESEPAEEVKQEADSGKGTV
3 ( -) ............................................................
4 ( -) ............................................................
5 ( -) ............................................................
//
0 ( 295) SYLGSFLPDVSCWDIDQEGDSSFSVQEVQVDSSHLPLVKGADEEQVFHFYWLDAYEDQYN
1 ( 295) SYLGSFLPDVSCWDIDQEGDSSFSVQEVQVDSSHLPLVKGADEEQVFHFYWLDAYEDQYN
2 ( 301) SYLGSFLPDVSCWDIDQEGDSSFSVQEVQVDSSHLPLVKGADEEQVFHFYWLDAYEDQYN
3 ( -) ............................................................
4 ( -) ............................................................
5 ( -) ............................................................
//
0 ( 355) QPGVVFLFGKVWIESAETHVSCCVMVKNIERTLYFLPREMKIDLNTGKETGTPISMKDVY
1 ( 355) QPGVVFLFGKVWIESAETHVSCCVMVKNIERTLYFLPREMKIDLNTGKETGTPISMKDVY
2 ( 361) QPGVVFLFGKVWIESAETHVSCCVMVKNIERTLYFLPREMKIDLNTGKETGTPISMKDVY
3 ( -) ............................................................
4 ( -) ............................................................
5 ( -) ............................................................
//
0 ( 415) EEFDEKIATKYKIMKFKSKPVEKNYAFE-IPDVPEKSEYLEVKYSAEMPQLPQDLKGETF
1 ( 415) EEFDEKIATKYKIMKFKSKPVEKNYAFE-IPDVPEKSEYLEVKYSAEMPQLPQDLKGETF
2 ( 421) EEFDEKIATKYKIMKFKSKPVEKNYAFE-IPDVPEKSEYLEVKYSAEMPQLPQDLKGETF
3 ( -) ............................................................
4 ( -) ............................................................
5 ( 2115) .........KCESLCFHSTPIIQRKLLERLPEAPGLS-----------P-LSTEPKTQKL
//
0 ( 474) SHVFGTNTSSLELFLMNRKIKGPCWLEVKSPQL---LNQPVSWCKVE-AMALKPDLVNV-
1 ( 474) SHVFGTNTSSLELFLMNRKIKGPCWLEVKSPQL---LNQPVSWCKVE-AMALKPDLVNV-
2 ( 480) SHVFGTNTSSLELFLMNRKIKGPCWLEVKSPQL---LNQPVSWCKVE-AMALKPDLVNV-
3 ( 254) .............FMVDTDIVGCNWLELPAGKYALRLKEKATQCQLE-ADVLWSDVVS--
4 ( 254) .............FMVDTDIVGCNWLELPAGKYALRLKEKATQCQLE-ADVLWSDVVS--
5 ( 2154) SNKKGSNTDTLRRVLLT-QAKNQ-FAAVNTPQK---ETSQIDGPSLNNTYGFKVSIQNLQ
//
0 ( 529) ----IKDVSPP--------PLVVMAFSMKTMQNA----KNHQNEIIAMAALVHHSFALDK
1 ( 529) ----IKDVSPP--------PLVVMAFSMKTMQNA----KNHQNEIIAMAALVHHSFALDK
2 ( 535) ----IKDVSPP--------PLVVMAFSMKTMQNA----KNHQNEIIAMAALVHHSFALDK
3 ( 298) --------HPPEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQIC-----SLGLRW
4 ( 298) --------HPPEGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQIC-----SLGLRW
5 ( 2209) EAKALHEIQNL--------TLISVELHARTRRDL----EP-DPEFDPICALF---YCISS
//
0 ( 573) AAPKPPFQ----SHFCVVSKPKDCIFP----YAFKEVIEKKNVKVEV--AATERTLLGFF
1 ( 573) AAPKPPFQ----SHFCVVSKPKDCIFP----YAFKEVIEKKNVKVEV--AATERTLLGFF
2 ( 579) AAPKPPFQ----SHFCVVSKPKDCIFP----YAFKEVIEKKNVKVEV--AATERTLLGFF
3 ( 345) GEPEPFLR------LALTLRP--CA-P----IL--------GAKVQS--YEKEEDLLQAW
4 ( 345) GEPEPFLR------LALTLRP--CA-P----IL--------GAKVQS--YEKEEDLLQAW
5 ( 2253) DTPLPDTEKTELTGVIVIDKDKT-VFSQDIRYQTPLLIRSGITGLEVTYAADEKALFHEI
//
0 ( 623) LAKVHKIDPDIIVGHNIYGFELEVLLQR-----INVCKAPHWSKIGRLKR--SNMPKLGG
1 ( 623) LAKVHKIDPDIIVGHNIYGFELEVLLQR-----INVCKAPHWSKIGRLKR--SNMPKLGG
2 ( 629) LAKVHKIDPDIIVGHNIYGFELEVLLQR-----INVCKAPHWSKIGRLKR--SNMPKLGG
3 ( 382) STFIRIMDPDVITGYNIQNFDLPYLISR-----AQTLKVQTFPFLGRVAGLCSNIRDSSF
4 ( 382) STFIRIMDPDVITGYNIQNFDLPYLISR-----AQTLKVQTFPFLGRVAGLCSNIRDSSF
5 ( 2312) ANIIKRYDPDILLGYEIQMHSWGYLLQRAAALSIDLCRMI--SRVPDDKI--ENRFA-AE
//
0 ( 676) RSG-FGERNATCGRMICDVEISAKELI----RCK----SYHLSELVQQILKTERVVIPME
1 ( 676) RSG-FGERNATCGRMICDVEISAKELI----RCK----SYHLSELVQQILKTERVVIPME
2 ( 682) RSG-FGERNATCGRMICDVEISAKELI----RCK----SYHLSELVQQILKTERVVIPME
3 ( 437) QSKQTGRRDTKVVSMVGRVQMDMLQVLLREYKLR----SYTLNAVSFHFLGEQKEDVQHS
4 ( 437) QSKQTGRRDTKVVSMVGRVQMDMLQVLLREYKLR----SYTLNAVSFHFLGEQKEDVQHS
5 ( 2367) RDE-YGSYTMSEINIVGRITLNLWRIM----RNEVALTNYTFENVSFHVLHQRFPLFTFR
//
0 ( 727) NIQNMYSESSQLLY--LLE-HTWKDAKFILQIMCELNVLPLALQITNIAGNIMSRTLMGG
1 ( 727) NIQNMYSESSQLLY--LLE-HTWKDAKFILQIMCELNVLPLALQITNIAGNIMSRTLMGG
2 ( 733) NIQNMYSESSQLLY--LLE-HTWKDAKFILQIMCELNVLPLALQITNIAGNIMSRTLMGG
3 ( 493) IITDLQNGNDQTRR--RLAVYCLKDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRG
4 ( 493) IITDLQNGNDQTRR--RLAVYCLKDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRG
5 ( 2422) VLSDWFDNKTDLYRWKMVD-HYVSRVRGNLQMLEQLDLIGKTSEMARLFGIQFLHVLTRG
//
0 ( 784) RSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDGDTN-KYKKGRKKAAYAGG
1 ( 784) RSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDGDTN-KYKKGRKKAAYAGG
2 ( 790) RSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEEIDGDTN-KYKKGRKKAAYAGG
3 ( 551) QQVKVVSQLLRQAMHEGLLMP---VVKSE----GGED--YTGATVIEPLKGVRPQDRAGA
4 ( 551) QQVKVVSQLLRQAMHEGLLMP---VVKSE----GGED-------------------YTGA
5 ( 2481) SQYRVESMMLRIAKPMNYIPVTPSVQQRSQMR----------------------APQCVP
//
0 ( 843) ----LVLDPKVG-----FYDKFILLLDFNSLYPSIIQEFNICFTTVQ------------R
1 ( 843) ----LVLDPKVG-----FYDKFILLLDFNSLYPSIIQEFNICFTTVQ------------R
2 ( 849) ----LVLDPKVG-----FYDKFILLLDFNSLYPSIIQEFNICFTTVQ------------R
3 ( 602) AWELLALTPGRGCSPPRYYDVPIATLDFSSLYPSIMMAHNLCYTTLL------------R
4 ( 585) ----TVIEPLKG-----YYDVPIATLDFSSLYPSIMMAHNLCYTTLL------------R
5 ( 2519) ----LIMEPESR-----FYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFK
//
0 ( 882) VASEAQKV--TED---GEQEQIP---ELPD------PSLEMGILPREIRKLVERRKQVK-
1 ( 882) VASEAQKV--TED---GEQEQIP---ELPD------PSLEMGILPREIRKLVERRKQVK-
2 ( 888) VASEAQKV--TED---GEQEQIP---ELPD------PSLEMGILPREIRKLVERRKQVK-
3 ( 650) PGT-AQKLGLTED----QFIRTPTGDEFVK------TSVRKGLLPQILENLLSARKRAKA
4 ( 624) PGT-AQKLGLTED----QFIRTPTGDEFVK------TSVRKGLLPQILENLLSARKRAKA
5 ( 2570) FGCTSLRV--PPDLLYQVRHDIT---VSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVK-
//
0 ( 927) QLMKQQDLNPDLILQYDIRQKALKLTANSMYGCLGFSYS-RFYAKPLAALVTYKGREILM
1 ( 927) QLMKQQDLNPDLILQYDIRQKALKLTANSMYGCLGFSYS-RFYAKPLAALVTYKGREILM
2 ( 933) QLMKQQDLNPDLILQYDIRQKALKLTANSMYGCLGFSYS-RFYAKPLAALVTYKGREILM
3 ( 699) ELAKETDPLRRQVL--DGRQLALKVSANSVYGFTGAQVG-KLPCLEISQSVTGFGRQMIE
4 ( 673) ELAKETDPLRRQVL--DGRQLALKVSANSVYGFTGAQVG-KLPCLEISQSVTGFGRQMIE
5 ( 2624) QSMKAYKQDRALSRMLDARQLGLKLIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLE
//
0 ( 986) HTKEMV---Q-KMNLE--------VIYGDTDSIMINTNSTNLEEVFKLGNKVKSEVNKLY
1 ( 986) HTKEMV---Q-KMNLE--------VIYGDTDSIMINTNSTNLEEVFKLGNKVKSEVNKLY
2 ( 992) HTKEMV---Q-KMNLE--------VIYGDTDSIMINTNSTNLEEVFKLGNKVKSEVNKLY
3 ( 756) KTKQLV---ESKYTVENGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGHF
4 ( 730) KTKQLV---ESKYTVENGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGHF
5 ( 2684) RAIKLVNDTK-KWGAR--------VVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATN
//
0 ( 1034) -KL-LEIDIDGVFKSLLLLKKKKYAALVVEPTSDGNYVTKQELKGLDIVRRDWCDLAKDT
1 ( 1034) -KL-LEIDIDGVFKSLLLLKKKKYAALVVEPTSDGNYVTKQELKGLDIVRRDWCDLAKDT
2 ( 1040) -KL-LEIDIDGVFKSLLLLKKKKYAALVVEPTSDGNYVTKQELKGLDIVRRDWCDLAKDT
3 ( 813) -PSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAH--DRMDCKGLEAVRRDNCPLVANL
4 ( 787) -PSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAH--DRMDCKGLEAVRRDNCPLVANL
5 ( 2735) PKP-VKLKFEKVYLPCVLQTKKRYVGYMYETLDQKDPVF--DAKGIETVRRDSCPAVSKI
//
0 ( 1092) GNFVIGQILSDQSRDTIVENIQKRLIEIGENVLNGSVPVSQFEINKALTKDPQDYPDKKS
1 ( 1092) GNFVIGQILSDQSRDTIVENIQKRLIEIGENVLNGSVPVSQFEINKALTKDPQDYPDKKS
2 ( 1098) GNFVIGQILSDQSRDTIVENIQKRLIEIGENVLNGSVPVSQFEINKALTKDPQDYPDKKS
3 ( 870) VTASLRRLLIDRDPEGAVAHAQ----DVISDLLCNRIDISQLVITKELTRAASDYAGKQA
4 ( 844) VTASLRRLLIDRDPEGAVAHAQ----DVISDLLCNRIDISQLVITKELTRAASDYAGKQA
5 ( 2792) LERSLKLLFETRDISLIKQYVQRQCMKL----LEGKASIQDFIFAKEY-RGSFSYKPGAC
//
0 ( 1152) LPHVHVALWINSQG-GR-KVKAGDTVSYVICQDGSNLTASQRAYAPEQLQKQDNLTIDTQ
1 ( 1152) LPHVHVALWINSQG-GR-KVKAGDTVSYVICQDGSNLTASQRAYAPEQLQKQDNLTIDTQ
2 ( 1158) LPHVHVALWINSQG-GR-KVKAGDTVSYVICQDGSNLTASQRAYAPEQLQKQDNLTIDTQ
3 ( 926) --HVELAERMRKRDPGS-APSLGDRVPYVIISAAKGVAAYMKSEDP-LFVLEHSLPIDTQ
4 ( 900) --HVELAERMRKRDPGS-APSLGDRVPYVIISAAKGVAAYMKSEDP-LFVLEHSLPIDTQ
5 ( 2847) VPALELTRKMLTYD-RRSEPQVGERVPYVIIYGTPGVPLIQLVRRPVEVLQDPTLRLNAT
//
0 ( 1210) YYLAQQIHPVVARICEPIDG---IDAVLIATWLGLDPTQFRVHHYHKDEENDALLGGPAQ
1 ( 1210) YYLAQQIHPVVARICEPIDG---IDAVLIATWLGLDPTQFRVHHYHKDEENDALLGGPAQ
2 ( 1216) YYLAQQIHPVVARICEPIDG---IDAVLIATWLGLDPTQFRVHHYHKDEENDALLGGPAQ
3 ( 982) YYLEQQLAKPLLRIFEPILGEGRAEAVLL...............................
4 ( 956) YYLEQQLAKPLLRIFEPILGEGRAEAVLL...............................
5 ( 2906) YYITKQILPPLARIFSLI-G---ID---VFSWYHELP---RIHKATSSSRSE-----P--
//
0 ( 1267) LTDEEKYRDCERFKC-PCPTCGTENIYDNVFDGSGTDMEPSLYRCSNIDCKASPLTFTVQ
1 ( 1267) LTDEEKYRDCERFKC-PCPTCGTENIYDNVFDGSGTDMEPSLYRCSNIDCKASPLTFTVQ
2 ( 1273) LTDEEKYRDCERFKC-PCPTCGTENIYDNVFDGSGTDMEPSLYRCSNIDCKASPLTFTVQ
3 ( -) ............................................................
4 ( -) ............................................................
5 ( 2949) --EGRKGTISQYFTTLHCPVC------DDLTQ-HGI--------CSK--CRSQPQHVAVI
//
0 ( 1326) LSNKLIMDIRRFIKKYYDGWLICEEPT-CRNRTRHLPLQFSRTGPLCPACMKAT-LQPEY
1 ( 1326) LSNKLIMDIRRFIKKYYDGWLICEEPT-CRNRTRHLPLQFSRTGPLCPACMKAT-LQPEY
2 ( 1332) LSNKLIMDIRRFIKKYYDGWLICEEPT-CRNRTRHLPLQFSRTGPLCPACMKAT-LQPEY
3 ( -) ............................................................
4 ( -) ............................................................
5 ( 2990) LN----QEIRELERQQEQLVKICKNCTGCFD--RHIPC----VSLNCPVLFKLSRVNREL
//
0 ( 1384) SDKSLYTQLCFYRYIFDAECALEKLTTDHEKDKLKKQFFTPKVLQDYRKLKNTAEQFLSR
1 ( 1384) SDKSLYTQLCFYRYIFDAECALEKLTTDHEKDKLKKQFFTPKVLQDYRKLKNTAEQFLSR
2 ( 1390) SDKSLYTQLCFYRYIFDAECALEKLTTDHEKDKLKKQFFTPKVLQDYRKLKNTAEQFLSR
3 ( -) ............................................................
4 ( -) ............................................................
5 ( 3040) SKAPYLRQL...................................................
//
0 ( 1444) SGYSEVNLSKLFAGCAVKS
1 ( 1444) SGYSEVNLSKLFAGCAVKS
2 ( 1450) SGYSEVNLSKLFAGCAVKS
3 ( -) ...................
4 ( -) ...................
5 ( -) ...................
//
