# 0 Query: pF1KE2312, 2136 aa
# 1 CCDS2020.1 SNRNP200 gene_id:23020|Hs108|chr2 (2136 aa)
# 2 CCDS5046.1 ASCC3 gene_id:10973|Hs108|chr6 (2202 aa)
# 3 CCDS30769.2 HFM1 gene_id:164045|Hs108|chr1 (1435 aa)
# 4 CCDS75497.1 ASCC3 gene_id:10973|Hs108|chr6 (731 aa)
//
exp sw-scr id% from to
1 0 14015 100.0 1 2136
2 0 5145 40.4 60 2167
3 9.2e-60 1181 31.5 219 1054
4 1.7e-55 1070 33.8 60 721
//
0 ( 1) MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTRMGDKAQRTK
1 ( 1) MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTRMGDKAQRTK
2 ( -) ............................................................
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 61) PQMQEERRAKRRKRDEDRHDINKMKGYTLLSEGIDEMVGIIYKPKTKETRETYEVLLSFI
1 ( 61) PQMQEERRAKRRKRDEDRHDINKMKGYTLLSEGIDEMVGIIYKPKTKETRETYEVLLSFI
2 ( 60) ..........................................KSKMQSINEDLKDILHAA
3 ( -) ............................................................
4 ( 60) ..........................................KSKMQSINEDLKDILHAA
//
0 ( 121) QAALG-DQPRD-ILCGAADEVLAVLKNEKLRDKERRKEIDLLLGQTDDTRYHVLVNLGKK
1 ( 121) QAALG-DQPRD-ILCGAADEVLAVLKNEKLRDKERRKEIDLLLGQTDDTRYHVLVNLGKK
2 ( 78) KQIVGTDNGREAIESGAAFLFMTFHLKDSVGHKET-KAIKQMFGPFPSSSATAACNATNR
3 ( -) ............................................................
4 ( 78) KQIVGTDNGREAIESGAAFLFMTFHLKDSVGHKET-KAIKQMFGPFPSSSATAACNATNR
//
0 ( 179) ITDYGGDKEIQNM-----DDNIDETY-GVNVQFESDEEEGDE----DVYGEVREEASDDD
1 ( 179) ITDYGGDKEIQNM-----DDNIDETY-GVNVQFESDEEEGDE----DVYGEVREEASDDD
2 ( 137) IISHFSQDDLTALVQMTEKEHGDRVFFGKNLAFSFDMHDLDHFDELPINGETQKTISLD-
3 ( -) ............................................................
4 ( 137) IISHFSQDDLTALVQMTEKEHGDRVFFGKNLAFSFDMHDLDHFDELPINGETQKTISLD-
//
0 ( 229) MEGDEAVVRCTLSANLVASGELMSSKKKDLHPRDIDAFW--LQRQLSRFYDDAIVSQKKA
1 ( 229) MEGDEAVVRCTLSANLVASGELMSSKKKDLHPRDIDAFW--LQRQLSRFYDDAIVSQKKA
2 ( 196) -------YKKFLNEHL---QEACTPELKPVEKTNGSFLWCEVEKYLNSTLKEMTEVPRVE
3 ( -) ............................................................
4 ( 196) -------YKKFLNEHL---QEACTPELKPVEKTNGSFLWCEVEKYLNSTLKEMTEVPRVE
//
0 ( 287) D---EVLEILKTASDDRECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLLASAQSEAEK
1 ( 287) D---EVLEILKTASDDRECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLLASAQSEAEK
2 ( 246) DLCCTLYDMLASIKSGDELQDELFELLGPEGLELIEKLLQNRITIVDRFLNSSNDHRFQA
3 ( -) ............................................................
4 ( 246) DLCCTLYDMLASIKSGDELQDELFELLGPEGLELIEKLLQNRITIVDRFLNSSNDHRFQA
//
0 ( 344) -----ERIMGKMEADPELSKFLYQLHETEKEDLIREERSRRERV--RQSRMDTDLET---
1 ( 344) -----ERIMGKMEADPELSKFLYQLHETEKEDLIREERSRRERV--RQSRMDTDLET---
2 ( 306) LQDNCKKILGE-NAKPNYGCQVTIQSEQEKQ-LMKQYRREEKRIARREKKAGEDLEVSEG
3 ( -) ............................................................
4 ( 306) LQDNCKKILGE-NAKPNYGCQVTIQSEQEKQ-LMKQYRREEKRIARREKKAGEDLEVSEG
//
0 ( 394) -MDLD------QGGEAL-----AP---RQV-LDLEDLVF-----T----------QG---
1 ( 394) -MDLD------QGGEAL-----AP---RQV-LDLEDLVF-----T----------QG---
2 ( 364) LMCFDPKELRIQREQALLNARSVPILSRQRDADVEKIHYPHVYDS----------QAEAM
3 ( 219) .....................................VF-----T----------AN---
4 ( 364) LMCFDPKELRIQREQALLNARSVPILSRQRDADVEKIHY-----PHVYDSQAEAMKT---
//
0 ( 420) --SHFMANKRCQLPDGSFRRQR--KGYEEVHVPALKPKPFGSEEQLLPVEKLPKYAQAGF
1 ( 420) --SHFMANKRCQLPDGSFRRQR--KGYEEVHVPALKPKPFGSEEQLLPVEKLPKYAQAGF
2 ( 414) KTSAFIAGAKMILPEGIQRENN--KLYEEVRIPYSEPMPLSFEEKPVYIQDLDEIGQLAF
3 ( 224) --NAFSAS---EIGEGMFKAPSFSVAFQPHDIQEVTENGLGS---LKAVTEIPAKFRSIF
4 ( 416) --SAFIAGAKMILPEGIQRENN--KLYEEVRIPYSEPMPLSFEEKPVYIQDLDEIGQLAF
//
0 ( 476) EGFKTLNRIQSKLYRAALETDENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDD
1 ( 476) EGFKTLNRIQSKLYRAALETDENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDD
2 ( 472) KGMKRLNRIQSIVFETAYNTNENMLICAPTGAGKTNIAMLTVLHEIRQHFQQ-GVIKKNE
3 ( 276) KEFPYFNYIQSKAFDDLLYTDRNFVICAPTGSGKTVVFELAITRLL-----MEVPLPWLN
4 ( 472) KGMKRLNRIQSIVFETAYNTNENMLICAPTGAGKTNIAMLTVLHEIRQHFQQ-GVIKKNE
//
0 ( 536) FKIIYIAPMRSLVQEMVGSFGKRLATYGITVAELTGDHQLCKE-EISATQIIVCTPEKWD
1 ( 536) FKIIYIAPMRSLVQEMVGSFGKRLATYGITVAELTGDHQLCKE-EISATQIIVCTPEKWD
2 ( 531) FKIVYVAPMKALAAEMTDYFSRRLEPLGIIVKELTGDMQLSKS-EILRTQMLVTTPEKWD
3 ( 331) IKIVYMAPIKALCSQRFDDWKEKFGPIGLNCKELTGDTVMDDLFEIQHAHIIMTTPEKWD
4 ( 531) FKIVYVAPMKALAAEMTDYFSRRLEPLGIIVKELTGDMQLSKS-EILRTQMLVTTPEKWD
//
0 ( 595) IITRKG-GERTYTQLVRLIILDEIHLLHDD-RGPVLEALVAR--AIRNIEMTQED-----
1 ( 595) IITRKG-GERTYTQLVRLIILDEIHLLHDD-RGPVLEALVAR--AIRNIEMTQED-----
2 ( 590) VVTRKSVGDVALSQIVRLLILDEVHLLHED-RGPVLESIVAR--TLRQVESTQSM-----
3 ( 391) SMTRKW-RDNSLVQLVRLFLIDEVHIVKDENRGPTLEVVVSRMKTVQSVSQTLKNTSTAI
4 ( 590) VVTRKSVGDVALSQIVRLLILDEVHLLHED-RGPVLESIVAR--TLRQVESTQSM-----
//
0 ( 646) -VRLIGLSATLPNYEDVATFLRVD--PAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQ
1 ( 646) -VRLIGLSATLPNYEDVATFLRVD--PAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQ
2 ( 642) -IRILGLSATLPNYLDVATFLHVN--PYIGLFFFDGRFRPVPLGQTFLGIKCANKMQQLN
3 ( 450) PMRFVAVSATIPNAEDIAEWLSDGERPAVCL-KMDESHRPVKLQKVVLGFPCSSNQTEFK
4 ( 642) -IRILGLSATLPNYLDVATFLHVN--PYIGLFFFDGRFRPVPLGQTFLGIKCANKMQQLN
//
0 ( 703) I---MNEIVYEKIMEH--AGKNQVLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSA
1 ( 703) I---MNEIVYEKIMEH--AGKNQVLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSA
2 ( 699) N---MDEVCYENVLKQVKAG-HQVMVFVHARNATVRTAMSLIERAKNCGHIPFFFPTQGH
3 ( 509) FDLTLNYKIASVIQMY--SDQKPTLVFCATRKGVQQAASV-----LVKDAKFIMTVE---
4 ( 699) N---MDEVCYENVLKQVKAG-HQVHLF.................................
//
0 ( 758) STEVLRTEAEQCKNLELKDLLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAW
1 ( 758) STEVLRTEAEQCKNLELKDLLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAW
2 ( 755) DYVLAEKQVQRSRNKQVRELFPDGFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAW
3 ( 559) QKQRLQKYAYSVRDSKLRDILKDGAAYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAM
4 ( -) ............................................................
//
0 ( 818) GVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQ
1 ( 818) GVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQ
2 ( 815) GVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLS
3 ( 619) GVNLPAHLVVIKSTMHYA--GGLFEEYSETDILQMIGRAGRPQFDTTATAVIMTRLSTRD
4 ( -) ............................................................
//
0 ( 878) YYLSLLNQQLPIESQMVSKLPDMLNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYG
1 ( 878) YYLSLLNQQLPIESQMVSKLPDMLNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYG
2 ( 875) HYLTLLTQRNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLAYG
3 ( 677) KYIQMLACRDTVESSLHRHLIEHLNAEIVLHTITDVNIAVEWIRSTLLYIRALKNPSHYG
4 ( -) ............................................................
//
0 ( 938) ISHDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNDT
1 ( 938) ISHDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNDT
2 ( 935) ISHKAYQIDPTLRKHREQLVIEVGRKLDKAQMIRFEERTGYFSSTDLGRTASHYYIKYNT
3 ( 737) FA-SGLNKDGI-EAKLQELCLKNLNDLSSLDLIKMDEGV-NFKPTEAGRLMAWYYITFET
4 ( -) ............................................................
//
0 ( 998) VQTYNQLL-KPTLSEIELFRVFSLSSEFKNITVREEEKLELQKLLE---RV-PI--PVKE
1 ( 998) VQTYNQLL-KPTLSEIELFRVFSLSSEFKNITVREEEKLELQKLLE---RV-PI--PVKE
2 ( 995) IETFNELF-DAHKTEGDIFAIVSKAEEFDQIKVREEEIEELDTLLS---NFCEL--STPG
3 ( 794) VKKFYTISGKETLS--DLVTLIAGCKEFLDIQLRINEKKTLNTLNKDPNRI-TIRFPMEG
4 ( -) ............................................................
//
0 ( 1051) SIEEPSAKINVLLQAFISQLKLEGFALMADMVYVTQSAGRLMRAIFEIVL--NRGWAQLT
1 ( 1051) SIEEPSAKINVLLQAFISQLKLEGFALMADMVYVTQSAGRLMRAIFEIVL--NRGWAQLT
2 ( 1049) GVENSYGKINILLQTYISRGEMDSFSLISDSAYVAQNAARIVRALFEIAL--RKRWPTMT
3 ( 851) RIKTREMKVNCLIQAQLGCIPIQDFALTQDTAKIFRHGSRITRWLSDFVAAQEKKFAVLL
4 ( -) ............................................................
//
0 ( 1109) DKTLNLCKMIDKRMWQ-SMCPLRQFRKLPEEVVKKIEKKNFP-FERLYDLNHNEIGELI-
1 ( 1109) DKTLNLCKMIDKRMWQ-SMCPLRQFRKLPEEVVKKIEKKNFP-FERLYDLNHNEIGELI-
2 ( 1107) YRLLNLSKVIDKRLWG-WASPLRQFSILPPHILTRLEEKKLT-VDKLKDMRKDEIGHIL-
3 ( 911) N-SLILAKCFRCKLWENSLHVSKQLEKIGITLSNAIVNAGLTSFKKIEETDAREL-ELIL
4 ( -) ............................................................
//
0 ( 1166) -RMPKMGKTIHKYVHLFPKLELSVHLQPITR-STLKVELTITP---DFQWDEKVHGS-SE
1 ( 1166) -RMPKMGKTIHKYVHLFPKLELSVHLQPITR-STLKVELTITP---DFQWDEKVHGS-SE
2 ( 1164) -HHVNIGLKVKQCVHQIPSVMMEASIQPITR-TVLRVTLSIYA---DFTWNDQVHGTVGE
3 ( 969) NRHPPFGTQIKETVMYLPKYELKV--EQITRYSDTTAEILVTVILRNFEQLQTKRTA-SD
4 ( -) ............................................................
//
0 ( 1220) AFWI--LVEDVDSEVILHHEY---FL-LKAKYAQDE-HLITFFVPVFEPLPPQYFIRVVS
1 ( 1220) AFWI--LVEDVDSEVILHHEY---FL-LKAKYAQDE-HLITFFVPVFEPLPPQYFIRVVS
2 ( 1219) PWWI--WVEDPTNDHIYHSEY---FLALKKQVISKEAQLLVFTIPIFEPLPSQYYIRAVS
3 ( 1026) SHYVTLIIGDADNQVVYLHKITDSVL-LKA..............................
4 ( -) ............................................................
//
0 ( 1273) DRWLSCETQLPVSFRHLILPEKYPPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQ
1 ( 1273) DRWLSCETQLPVSFRHLILPEKYPPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQ
2 ( 1274) DRWLGAEAVCIINFQHLILPERHPPHTELLDLQPLPITALGCKAYEALY--NFSHFNPVQ
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 1333) TQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMD
1 ( 1333) TQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMD
2 ( 1332) TQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFNKYPTSKAVYIAPLKALVRERMDD
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 1393) WYEKFQDRLNKKVVLLTGETSTDLKLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLFV
1 ( 1393) WYEKFQDRLNKKVVLLTGETSTDLKLLGKGNIIISTPEKWDILSRRWKQRKNVQNINLFV
2 ( 1392) WKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQNRNYVQQVTILI
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 1453) VDEVHLIGGENGPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDVAHWLGCSATSTF
1 ( 1453) VDEVHLIGGENGPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDVAHWLGCSATSTF
2 ( 1452) IDEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIKQMGLF
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 1513) NFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAITKHSPKKPVIVFVPSRKQTRLT
1 ( 1513) NFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAITKHSPKKPVIVFVPSRKQTRLT
2 ( 1512) NFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPAFQAIRSHSPAKPVLIFVSSRRQTRLT
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 1573) AIDILTTCAADIQRQRFLHCTEKDLIPYLEKLSDSTLKETLLNGVGYLHEGLSPMERRLV
1 ( 1573) AIDILTTCAADIQRQRFLHCTEKDLIPYLEKLSDSTLKETLLNGVGYLHEGLSPMERRLV
2 ( 1572) ALELIAFLATEEDPKQWLNMDEREMENIIATVRDSNLKLTLAFGIGMHHAGLHERDRKTV
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 1633) EQLFSSGAIQVVVASRSLCWGMNVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQMVGHAN
1 ( 1633) EQLFSSGAIQVVVASRSLCWGMNVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQMVGHAN
2 ( 1632) EELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAG
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 1693) RPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAV
1 ( 1693) RPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAV
2 ( 1692) RPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDAL
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 1753) DYLTWTFLYRRMTQNPNYYNLQGISHRHLSDHLSELVEQTLSDLEQSKCISI-EDEMDVA
1 ( 1753) DYLTWTFLYRRMTQNPNYYNLQGISHRHLSDHLSELVEQTLSDLEQSKCISI-EDEMDVA
2 ( 1752) DYITWTYFFRRLIMNPSYYNLGDVSHDSVNKFLSHLIEKSLIELELSYCIEIGEDNRSIE
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 1812) PLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIPIRHHEDNLLRQL
1 ( 1812) PLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIPIRHHEDNLLRQL
2 ( 1812) PLTYGRIASYYYLKHQTVKMFKDRLKPECSTEELLSILSDAEEYTDLPVRHNEDHMNSEL
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 1872) AQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSA-ELQSDTEEILSKAIRLIQACVDVL
1 ( 1872) AQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSA-ELQSDTEEILSKAIRLIQACVDVL
2 ( 1872) AKCLPIESNPHSFDSPHTKAHLLLQAHLSRAMLPCPDYDTDTKTVLDQALRVCQAMLDVA
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 1931) SSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHI----------KRCTDKGVE
1 ( 1931) SSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHI----------KRCTDKGVE
2 ( 1932) ANQGWLVTVLNITNLIQMVIQGRWLKDSSLLTLPNIENHHLHLFKKWKPIMKGPHARGRT
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 1981) SVFDIMEM------EDEERNALLQ--LTDSQIADVARFCNRYPNI---------------
1 ( 1981) SVFDIMEM------EDEERNALLQ--LTDSQIADVARFCNRYPNI---------------
2 ( 1992) SIESLPELIHACGGKDHVFSSMVESELHAAKTKQAWNFLSHLPVINVGISVKGSWDDLVE
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 2018) ---ELSYEVVDKDS--------IRSGGPVVVLVQLER------EEEVTGPVIAPLFPQKR
1 ( 2018) ---ELSYEVVDKDS--------IRSGGPVVVLVQLER------EEEVTGPVIAPLFPQKR
2 ( 2052) GHNELSVSTLTADKRDDNKWIKLHADQEYVLQVSLQRVHFGFHKGKPESCAVTPRFPKSK
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 2061) EEGWWVVIGDAKSNSLISIKRLTLQQKAKV-KLDFVAPAT-GAHNYTLYFMSDAYMGCDQ
1 ( 2061) EEGWWVVIGDAKSNSLISIKRLTLQQKAKV-KLDFVAPAT-GAHNYTLYFMSDAYMGCDQ
2 ( 2112) DEGWFLILGEVDKRELIALKRVGYIRNHHVASLSFYTPEIPGRYIYTLYFMSDCYL....
3 ( -) ............................................................
4 ( -) ............................................................
//
0 ( 2119) EYKFSVDVKEAETDSDSD
1 ( 2119) EYKFSVDVKEAETDSDSD
2 ( -) ..................
3 ( -) ..................
4 ( -) ..................
//
