# 0 Query: pF1KB8958, 335 aa
# 1 CCDS5401.1 HOXA1 gene_id:3198|Hs108|chr7 (335 aa)
# 2 CCDS5402.2 HOXA1 gene_id:3198|Hs108|chr7 (137 aa)
# 3 CCDS32675.1 HOXB1 gene_id:3211|Hs108|chr17 (301 aa)
# 4 CCDS2271.1 HOXD1 gene_id:3231|Hs108|chr2 (328 aa)
//
exp sw-scr id% from to
1 2.2e-98 2307 99.7 1 335
2 1.8e-32 836 99.2 1 118
3 1e-22 731 45.9 1 301
4 3.4e-18 535 37.0 1 328
//
0 ( 1) MDNARMNSFLEYPILSS-----GDSGTCSARAYPSDHRITTFQ-SCAVSANSCGGDDRFL
1 ( 1) MDNARMNSFLEYPILSS-----GDSGTCSARAYPSDHRITTFQ-SCAVSANSCGGDDRFL
2 ( 1) MDNARMNSFLEYPILSS-----GDSGTCSARAYPSDHRITTFQ-SCAVSANSCGGDDRFL
3 ( 1) MDYNRMNSFLEYPLCNR-----GPSAY-SAHSAP-----TSFPPSSAQAVDSYASEGRY-
4 ( 1) .....MSSYLEYVSCSSSGGVGGDVLSLAPKFCRSDARPVALQ-PAFPLGN---GDGAFV
//
*
0 ( 55) VGRGVQIGSPHHHHHHHHHHPQ---PAT-----YQTS-----GNL--GVSYSHSSCGPSY
1 ( 55) VGRGVQIGSPHHHHHHHHRHPQ---PAT-----YQTS-----GNL--GVSYSHSSCGPSY
2 ( 55) VGRGVQIGSPHHHHHHHHRHPQ---PAT-----YQTS-----GNL--GVSYSHSSCGPSY
3 ( 49) -GGG--LSSPAFQQNSGYPAQQ---PPSTLGVPFPSS-----APS--G--YAPAACSPSY
4 ( 52) SCLPLAAARPSPSPPAAPARPSVPPPAA-----PQYAQCTLEGAYEPGAAPAAAAGGADY
//
0 ( 100) GSQNFSAPYS-PYALNQ-EADVSGGYPQCAP-AVYSGNLSSPMVQHHHHHQGYAGGAVGS
1 ( 100) GSQNFSAPYS-PYALNQ-EADVSGGYPQCAP-AVYSGNLSSPMVQHHHHHQGYAGGAVGS
2 ( 100) GSQNFSAPYS-PYALNQ-EAD.......................................
3 ( 94) G------PSQ-YYPLGQSEGD--GGYFH--P-SSYGAQLGG-------LSDGYGAGGAGP
4 ( 107) GFLGSGPAYDFPGVLGR-AADDGGSHVHYATSAVFSGG-GSFLLSGQVDYAAF--GEPGP
//
0 ( 157) -PQYI--HHSYGQEHQSLALATYNNSLSPLHASHQEACRSPASETSSP-AQTFDWMKVKR
1 ( 157) -PQYI--HHSYGQEHQSLALATYNNSLSPLHASHQEACRSPASETSSP-AQTFDWMKVKR
2 ( -) ............................................................
3 ( 135) -GPYPPQHPPYGNEQTASFAPAYADLLS---EDKETPC--P-SEPNTPTARTFDWMKVKR
4 ( 163) FPACL--KASADGHPGAFQTA------SPAPGTYPKSV-SPASGLPAA-FSTFEWMKVKR
//
0 ( 213) NPPKTGKVGEYGYLGQPNAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQ
1 ( 213) NPPKTGKVGEYGYLGQPNAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQ
2 ( -) ............................................................
3 ( 188) NPPKTAKVSEPG-LGSPSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQ
4 ( 213) NASKKGKLAEYGAASPSSAIRTNFSTKQLTELEKEFHFNKYLTRARRIEIANCLHLNDTQ
//
0 ( 273) VKIWFQNRRMKQKKREKE-GLLPISPATPPGND-EKAEESSEKSSSSPCVPSPGSSTSDT
1 ( 273) VKIWFQNRRMKQKKREKE-GLLPISPATPPGND-EKAEESSEKSSSSPCVPSPGSSTSDT
2 ( -) ............................................................
3 ( 247) VKIWFQNRRMKQKKREREEGRVP--PA-PPGCPKEAAGDASDQSTCTSPEASPSSVTS..
4 ( 273) VKIWFQNRRMKQKKRERE-GLLATAIPVAPLQL-PLSGTTPTKFIKNPGSPSQSQEPS..
//
0 ( 331) LTTSH
1 ( 331) LTTSH
2 ( -) .....
3 ( -) .....
4 ( -) .....
//
