#  0    Query: pF1KB8912, 251 aa
#  1    CCDS11529.1 HOXB4 gene_id:3214|Hs108|chr17    (251 aa)
#  2    CCDS8873.1 HOXC4 gene_id:3221|Hs108|chr12    (264 aa)
#  3    CCDS2269.1 HOXD4 gene_id:3233|Hs108|chr2    (255 aa)
#  4    CCDS5405.1 HOXA4 gene_id:3201|Hs108|chr7    (320 aa)

//
        exp       sw-scr    id%      from      to
   1    7.1e-37     1845  100.0         1     251
   2    3.4e-16      953   59.9         1     231
   3    1.2e-14      862   58.2         1     229
   4    4.7e-12      803   50.2        42     296

//
                                                                             
   0  (    1)    MAMSSFLINSNYVDPKFPPCEEYS-QSDYLPS-----DHSPGYYAGGQRRESSFQPEAGF
   1  (    1)    MAMSSFLINSNYVDPKFPPCEEYS-QSDYLPS-----DHSPGYYAGGQRRESSFQPEAGF
   2  (    1)    MIMSSYLMDSNYIDPKFPPCEEYS-QNSYIP------EHSPEYY--GRTRESGFQHHH--
   3  (    1)    MVMSSYMVNSKYVDPKFPPCEEYL-QGGYL-G-----EQGADYYGGGAQG-ADFQPP-GL
   4  (   42)    ...........YQQPPAPPTQHLPLQQPQLPHAGGGREPTASYYAPRTAREPAYPAAALY

//
                                                                             
   0  (   55)    GRRAACTVQR---YAACRDPGPPPPPPP--PPPPPP-------PPG--------LSPRAP
   1  (   55)    GRRAACTVQR---YAACRDPGPPPPPPP--PPPPPP-------PPG--------LSPRAP
   2  (   50)    -----------------QELYPPPPPRP--SYPERQYSCTSLQGPG--------NS-RGH
   3  (   52)    YPRPDFGEQP---FGGS-GPGPGSALPARGHGQEPG-------GPGGHY-----AAPGEP
   4  (   91)    PAHGAADTAYPYGYRGGASPGRPPQPEQ--PPAQAK-------GPAHGLHASHVLQPQLP

//
                                                                             
   0  (   95)    AP-PPAGALLPEPGQR-CE-------AVSSSPPPPPCAQNPLHP------SPSHSACKEP
   1  (   95)    AP-PPAGALLPEPGQR-CE-------AVSSSPPPPPCAQNPLHP------SPSHSACKEP
   2  (   82)    GP-AQAGHHHPEKSQSLCEPAPLSGASASPSPAPPACSQ-PAPD------HPSSAASKQP
   3  (   96)    CPAPPAPPPAPLPGAR----------AYSQSDPKQP---------------PSGTALKQP
   4  (  142)    PP-LQPRAVPPAAPRR-CE-------AAPATPGVPAGGSAPACPLLLADKSPLGLKGKEP

//
                                                                             
   0  (  140)    -VVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHA
   1  (  140)    -VVYPWMRKVHVSTVNPNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHA
   2  (  134)    -IVYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHS
   3  (  131)    AVVYPWMKKVHVNSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT
   4  (  193)    -VVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHT

//
                                                                      
   0  (  199)    LCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSGGAAGSAGGPPGRPNGGPRAL
   1  (  199)    LCLSERQIKIWFQNRRMKWKKDHKLPNTKIRSGGAAGSAGGPPGRPNGGPRAL
   2  (  193)    LCLSERQIKIWFQNRRMKWKKDHRLPNTKVRSAPPAGAA..............
   3  (  191)    LCLSERQIKIWFQNRRMKWKKDHKLPNTKGRSSSSSSSS..............
   4  (  252)    LCLSERQVKIWFQNRRMKWKKDHKLPNTKMRSSNSASASAGPPGK........

//