# 0 Query: pF1KSDA1088, 1400 aa
# 1 CCDS63331.1 RTEL1 gene_id:51750|Hs108|chr20 (1300 aa)
# 2 CCDS13531.1 RTEL1 gene_id:51750|Hs108|chr20 (1219 aa)
# 3 CCDS13530.3 RTEL1 gene_id:51750|Hs108|chr20 (1243 aa)
# 4 CCDS74751.1 RTEL1 gene_id:51750|Hs108|chr20 (996 aa)
# 5 CCDS11631.1 BRIP1 gene_id:83990|Hs108|chr17 (1249 aa)
//
exp sw-scr id% from to
1 0 8886 99.8 1 1300
2 0 8253 99.9 1 1218
3 0 8195 98.0 1 1242
4 0 6748 99.9 1 995
5 9.6e-32 1155 32.1 241 957
//
0 ( 1) MPKIVLNGVTVDFPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWR
1 ( 1) MPKIVLNGVTVDFPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWR
2 ( 1) MPKIVLNGVTVDFPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWR
3 ( 1) MPKIVLNGVTVDFPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWR
4 ( -) ............................................................
5 ( -) ............................................................
//
0 ( 61) EHLRDGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLT
1 ( 61) EHLRDGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLT
2 ( 61) EHLRDGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLT
3 ( 61) EHLRDGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLT
4 ( -) ............................................................
5 ( 241) ...........................................SKIPKIYFGTRTHKQIA
//
0 ( 121) QVINELRNTSYR------------------------P-KVCVLGSREQLCIHPEVKKQ-E
1 ( 121) QVINELRNTSYR------------------------P-KVCVLGSREQLCIHPEVKKQ-E
2 ( 121) QVINELRNTSYR------------------------P-KVCVLGSREQLCIHPEVKKQ-E
3 ( 121) QVINELRNTSYRSRCRATLWVLETAPPRPTVLSPTRP-KVCVLGSREQLCIHPEVKKQ-E
4 ( -) ............................................................
5 ( 258) QITRELRRTAYS------------------------GVPMTILSSRDHTCVHPEVVGNFN
//
0 ( 155) SNHLQIHLCRKKVASRSCHFYNNVEEKSLEQELAS-----PILDIEDLVKSGSKHRVCPY
1 ( 155) SNHLQIHLCRKKVASRSCHFYNNVEEKSLEQELAS-----PILDIEDLVKSGSKHRVCPY
2 ( 155) SNHLQIHLCRKKVASRSCHFYNNVEEKSLEQELAS-----PILDIEDLVKSGSKHRVCPY
3 ( 179) SNHLQIHLCRKKVASRSCHFYNNVEEKSLEQELAS-----PILDIEDLVKSGSKHRVCPY
4 ( -) ............................................................
5 ( 294) RNEKCMELLDGK-NGKSCYFYHGVHKISDQHTLQTFQGMCKAWDIEELVSLGKKLKACPY
//
0 ( 210) YLSRNLKQQADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTP
1 ( 210) YLSRNLKQQADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTP
2 ( 210) YLSRNLKQQADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTP
3 ( 234) YLSRNLKQQADIIFMPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTP
4 ( 1) ..............MPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTP
5 ( 353) YTARELIQDADIIFCPYNYLLDAQIRESMDLNLKEQVVILDEAHNIEDCARESASYSVTE
//
0 ( 270) HDLASGLDVIDQVLEEQTKAAQQGEPHPEFSA------DSPSPGL-NMELEDIAKL----
1 ( 270) HDLASGLDVIDQVLEEQTKAAQQGEPHPEFSA------DSPSPGL-NMELEDIAKL----
2 ( 270) HDLASGLDVIDQVLEEQTKAAQQGEPHPEFSA------DSPSPGL-NMELEDIAKL----
3 ( 294) HDLASGLDVIDQVLEEQTKAAQQGEPHPEFSA------DSPSPGL-NMELEDIAKL----
4 ( 47) HDLASGLDVIDQVLEEQTKAAQQGEPHPEFSA------DSPSPGL-NMELEDIAKL----
5 ( 413) VQLRFARDELDSMVNNNIRK-KDHEPLRAVCCSLINWLEANAEYLVERDYESACKIWSGN
//
0 ( 319) KMILLRLEGAIDAVELP---GDDSGVTKPGSYIFELFA-----EAQITFQTKGCILDSLD
1 ( 319) KMILLRLEGAIDAVELP---GDDSGVTKPGSYIFELFA-----EAQITFQTKGCILDSLD
2 ( 319) KMILLRLEGAIDAVELP---GDDSGVTKPGSYIFELFA-----EAQITFQTKGCILDSLD
3 ( 343) KMILLRLEGAIDAVELP---GDDSGVTKPGSYIFELFA-----EAQITFQTKGCILDSLD
4 ( 96) KMILLRLEGAIDAVELP---GDDSGVTKPGSYIFELFA-----EAQITFQTKGCILDSLD
5 ( 472) EMLLTLHKMGITTATFPILQGHFSAVLQKEEKISPIYGKEEAREVPVISASTQIMLKGLF
//
0 ( 371) QIIQHLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAG
1 ( 371) QIIQHLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAG
2 ( 371) QIIQHLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAG
3 ( 395) QIIQHLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAG
4 ( 148) QIIQHLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAG
5 ( 532) MVLDYLFRQNSRFADD---YKIA--IQQTYSWT-NQIDISDKNGLLVLPKNK--------
//
0 ( 431) HRRTAQRSDAWSTTAARKRGKVLSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFAL
1 ( 431) HRRTAQRSDAWSTTAARKRGKVLSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFAL
2 ( 431) HRRTAQRSDAWSTTAARKRGKVLSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFAL
3 ( 455) HRRTAQRSDAWSTTAARKRGKVLSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFAL
4 ( 208) HRRTAQRSDAWSTTAARKRGKVLSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFAL
5 ( 578) -KRSRQK------TAVH----VLNFWCLNPAVAFSD-INGKVQTIVLTSGTLSPMKSFSS
//
0 ( 491) EMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIAR
1 ( 491) EMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIAR
2 ( 491) EMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIAR
3 ( 515) EMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIAR
4 ( 268) EMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIAR
5 ( 626) ELGVTFTIQLEANHIIKNSQVWVGTIGSGPKGRNLCATFQNTETFEFQDEVGALLLSVCQ
//
0 ( 551) VVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEPRS--KGSFSETISAYYAR
1 ( 551) VVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEPRS--KGSFSETISAYYAR
2 ( 551) VVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEPRS--KGSFSETISAYYAR
3 ( 575) VVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEPRS--KGSFSETISAYYAR
4 ( 328) VVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEPRS--KGSFSETISAYYAR
5 ( 686) TVSQGILCFLPSYKLLEKLKERWLSTGLWHNLELVKTVIVEPQGGEKTNFDELLQVYYDA
//
0 ( 609) VAAPG-STGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKMQFLDEMK
1 ( 609) VAAPG-STGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKMQFLDEMK
2 ( 609) VAAPG-STGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKMQFLDEMK
3 ( 633) VAAPG-STGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKMQFLDEMK
4 ( 386) VAAPG-STGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKMQFLDEMK
5 ( 746) IKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHS
//
0 ( 668) GQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAFADAR--AQLP
1 ( 668) GQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAFADAR--AQLP
2 ( 668) GQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAFADAR--AQLP
3 ( 692) GQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAFADAR--AQLP
4 ( 445) GQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAFADAR--AQLP
5 ( 806) KLRG----LLPGRQWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRNNPSRYISGLS
//
0 ( 726) SWVRPHVRVYDNFGHVIRDVAQFFRVAERTMPAPAPRATAPSVRGEDAVSEAKSPGPFFS
1 ( 726) SWVRPHVRVYDNFGHVIRDVAQFFRVAERTMPAPAPRATAPSVRGEDAVSEAKSPGPFFS
2 ( 726) SWVRPHVRVYDNFGHVIRDVAQFFRVAERTMPAPAPRATAPSVRGEDAVSEAKSPGPFFS
3 ( 750) SWVRPHVRVYDNFGHVIRDVAQFFRVAERTMPAPAPRATAPSVRGEDAVSEAKSPGPFFS
4 ( 503) SWVRPHVRVYDNFGHVIRDVAQFFRVAERTMPAPAPRATAPSVRGEDAVSEAKSPGPFFS
5 ( 862) KWVRQQIQHHSTFESALESLAEFSKKHQKVLNV--------SIKDRTNIQDNESTLEVTS
//
0 ( 786) TRKAKSLDLHVPSLKQRSSGSPAAG-DPESSLCVEYEQEP-VPARQRPRGLLAALEHSEQ
1 ( 786) TRKAKSLDLHVPSLKQRSSGSPAAG-DPESSLCVEYEQEP-VPARQRPRGLLAALEHSEQ
2 ( 786) TRKAKSLDLHVPSLKQRSSGSPAAG-DPESSLCVEYEQEP-VPARQRPRGLLAALEHSEQ
3 ( 810) TRKAKSLDLHVPSLKQRSSGSPAAG-DPESSLCVEYEQEP-VPARQRPRGLLAALEHSEQ
4 ( 563) TRKAKSLDLHVPSLKQRSSGSPAAG-DPESSLCVEYEQEP-VPARQRPRGLLAALEHSEQ
5 ( 914) LKYSTSPYL----LEAASHLSPENFVEDEAKICVQELQCPKIITKNSP............
//
0 ( 844) RAGSPGEEQAHSCSTLSLLSEKRPAEEPRGGRKKIRLVSHPEEPVAGAQTDRAKLFMVAV
1 ( 844) RAGSPGEEQAHSCSTLSLLSEKRPAEEPRGGRKKIRLVSHPEEPVAGAQTDRAKLFMVAV
2 ( 844) RAGSPGEEQAHSCSTLSLLSEKRPAEEPRGGRKKIRLVSHPEEPVAGAQTDRAKLFMVAV
3 ( 868) RAGSPGEEQAHSCSTLSLLSEKRPAEEPRGGRKKIRLVSHPEEPVAGAQTDRAKLFMVAV
4 ( 621) RAGSPGEEQAHSCSTLSLLSEKRPAEEPRGGRKKIRLVSHPEEPVAGAQTDRAKLFMVAV
5 ( -) ............................................................
//
0 ( 904) KQELSQANFATFTQALQDYKGSDDFAALAACLGPLFAEDPKKHNLLQGFYQFVRPHHKQQ
1 ( 904) KQELSQANFATFTQALQDYKGSDDFAALAACLGPLFAEDPKKHNLLQGFYQFVRPHHKQQ
2 ( 904) KQELSQANFATFTQALQDYKGSDDFAALAACLGPLFAEDPKKHNLLQGFYQFVRPHHKQQ
3 ( 928) KQELSQANFATFTQALQDYKGSDDFAALAACLGPLFAEDPKKHNLLQGFYQFVRPHHKQQ
4 ( 681) KQELSQANFATFTQALQDYKGSDDFAALAACLGPLFAEDPKKHNLLQGFYQFVRPHHKQQ
5 ( -) ............................................................
//
0 ( 964) FEEVCIQLTGRGCGYRPEHSIPRRQRAQPVLDPTGRTAPDPKLTVSTAAAQQLDPQEHLN
1 ( 964) FEEVCIQLTGRGCGYRPEHSIPRRQRAQPVLDPTGRTAPDPKLTVSTAAAQQLDPQEHLN
2 ( 964) FEEVCIQLTGRGCGYRPEHSIPRRQRAQPVLDPTGRTAPDPKLTVSTAAAQQLDPQEHLN
3 ( 988) FEEVCIQLTGRGCGYRPEHSIPRRQRAQPVLDPTGRTAPDPKLTVSTAAAQQLDPQEHLN
4 ( 741) FEEVCIQLTGRGCGYRPEHSIPRRQRAQPVLDPTGRTAPDPKLTVSTAAAQQLDPQEHLN
5 ( -) ............................................................
//
*
0 ( 1024) QGRPHLSPRPPPTGDPGSHPQWGSGVPRAGKQGQHAVSAYLADARRALGSAGCSQLLAAL
1 ( 1024) QGRPHLSPRPPPTGDPGSQPQWGSGVPRAGKQGQHAVSAYLADARRALGSAGCSQLLAAL
2 ( 1024) QGRPHLSPRPPPTGDPGSQPQWGSGVPRAGKQGQHAVSAYLADARRALGSAGCSQLLAAL
3 ( 1048) QGRPHLSPRPPPTGDPGSQPQWGSGVPRAGKQGQHAVSAYLADARRALGSAGCSQLLAAL
4 ( 801) QGRPHLSPRPPPTGDPGSQPQWGSGVPRAGKQGQHAVSAYLADARRALGSAGCSQLLAAL
5 ( -) ............................................................
//
0 ( 1084) TAYKQDDDLDKVLAVLAALTTAKPEDFPLLHRFSMFVRPHHKQRFSQTCTDLTGRPYPGM
1 ( 1084) TAYKQDDDLDKVLAVLAALTTAKPEDFPLLHRFSMFVRPHHKQRFSQTCTDLTGRPYPGM
2 ( 1084) TAYKQDDDLDKVLAVLAALTTAKPEDFPLLHRFSMFVRPHHKQRFSQTCTDLTGRPYPGM
3 ( 1108) TAYKQDDDLDKVLAVLAALTTAKPEDFPLLHRFSMFVRPHHKQRFSQTCTDLTGRPYPGM
4 ( 861) TAYKQDDDLDKVLAVLAALTTAKPEDFPLLHRFSMFVRPHHKQRFSQTCTDLTGRPYPGM
5 ( -) ............................................................
//
0 ( 1144) EPPGPQEERLAVPPVLTHRAPQPGPSRSEKTGKTQSKISSFLRQRPAGTVGAGGEDAGPS
1 ( 1144) EPPGPQEERLAVPPVLTHRAPQPGPSRSEKTGKTQSKISSFLRQRPAGTVGAGGEDAGPS
2 ( 1144) EPPGPQEERLAVPPVLTHRAPQPGPSRSEKTGKTQSKISSFLRQRPAGTVGAGGEDAGPS
3 ( 1168) EPPGPQEERLAVPPVLTHRAPQPGPSRSEKTGKTQSKISSFLRQRPAGTVGAGGEDAGPS
4 ( 921) EPPGPQEERLAVPPVLTHRAPQPGPSRSEKTGKTQSKISSFLRQRPAGTVGAGGEDAGPS
5 ( -) ............................................................
//
0 ( 1204) QSSGPPHGPAASEWGEPHGRDIAGQQATGAPGGPLSAGCVCQGCGAEDVVPFQCPACDFQ
1 ( 1204) QSSGPPHGPAASEWGEPHGRDIAGQQATGAPGGPLSAGCVCQGCGAEDVVPFQCPACDFQ
2 ( 1204) QSSGPPHGPAASEWG.............................................
3 ( 1228) QSSGPPHGPAASEWG.............................................
4 ( 981) QSSGPPHGPAASEWG.............................................
5 ( -) ............................................................
//
************************
0 ( 1264) RCQACWQRHLQASRMCPACHTASRKQSVMQVFWPEPHKDHEGAGGARPVAAVPGVGAACP
1 ( 1264) RCQACWQRHLQASRMCPACHTASRKQSVMQVFWPEPQ.......................
2 ( -) ............................................................
3 ( -) ............................................................
4 ( -) ............................................................
5 ( -) ............................................................
//
************************************************************
0 ( 1324) AAGAGCTRSGRNTHLPLAGRRDRGAAGVRPVPPRHLCAAAVPPRQPHDVWPVSTAPLHAV
1 ( -) ............................................................
2 ( -) ............................................................
3 ( -) ............................................................
4 ( -) ............................................................
5 ( -) ............................................................
//
*****************
0 ( 1384) LELPGALPLLQRPLRGA
1 ( -) .................
2 ( -) .................
3 ( -) .................
4 ( -) .................
5 ( -) .................
//
