# 0 Query: pF1KE1026, 979 aa
# 1 CCDS12301.1 RFX1 gene_id:5989|Hs108|chr19 (979 aa)
# 2 CCDS6449.1 RFX3 gene_id:5991|Hs108|chr9 (749 aa)
# 3 CCDS6450.1 RFX3 gene_id:5991|Hs108|chr9 (707 aa)
# 4 CCDS12158.1 RFX2 gene_id:5990|Hs108|chr19 (698 aa)
# 5 CCDS12157.1 RFX2 gene_id:5990|Hs108|chr19 (723 aa)
//
exp sw-scr id% from to
1 3.1e-129 6473 99.9 1 979
2 1.2e-45 2636 61.2 29 684
3 2.1e-44 2575 62.0 29 656
4 9.8e-43 2513 56.6 25 690
5 5.1e-42 2465 56.1 25 715
//
0 ( 1) MATQAYTELQAAPPPSQPPQAPPQAQPQPPPPPPPAAPQPPQPPTAAATPQPQYVTELQS
1 ( 1) MATQAYTELQAAPPPSQPPQAPPQAQPQPPPPPPPAAPQPPQPPTAAATPQPQYVTELQS
2 ( -) ............................................................
3 ( -) ............................................................
4 ( -) ............................................................
5 ( -) ............................................................
//
0 ( 61) PQPQAQPPGGQKQYVTELPAVPAPSQPTGAPTPSPAPQQYIVVTVSEGAMRASETVSEAS
1 ( 61) PQPQAQPPGGQKQYVTELPAVPAPSQPTGAPTPSPAPQQYIVVTVSEGAMRASETVSEAS
2 ( -) ............................................................
3 ( -) ............................................................
4 ( -) ............................................................
5 ( -) ............................................................
//
0 ( 121) PGSTASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLTNIQVPQQALPTQRLVV
1 ( 121) PGSTASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLTNIQVPQQALPTQRLVV
2 ( -) ............................................................
3 ( -) ............................................................
4 ( -) ............................................................
5 ( -) ............................................................
//
0 ( 181) QSAAPGSKGGQVSLTVHGTQQVHSPPEQSPVQANSSSSKTAGAPTGTVPQQLQVHGVQQS
1 ( 181) QSAAPGSKGGQVSLTVHGTQQVHSPPEQSPVQANSSSSKTAGAPTGTVPQQLQVHGVQQS
2 ( -) ............................................................
3 ( -) ............................................................
4 ( -) ............................................................
5 ( -) ............................................................
//
0 ( 241) VPVTQERSVVQATPQAPKPGPVQPLTVQGLQPVHVAQEVQQLQQVP-VPHVYSSQVQYVE
1 ( 241) VPVTQERSVVQATPQAPKPGPVQPLTVQGLQPVHVAQEVQQLQQVP-VPHVYSSQVQYVE
2 ( 29) ...........................QVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYVE
3 ( 29) ...........................QVVQQVPVQQQVQQVQTVQQVQHVYPAQVQYVE
4 ( 25) VPASPQRVLVQAASSNPKGAQMQPISLPRVQ--QVPQQVQ-----P-VQHVYPAQVQYVE
5 ( 25) VPASPQRVLVQAASSNPKGAQMQPISLPRVQ--QVPQQVQ-----P-VQHVYPAQVQYVE
//
0 ( 300) GGDASYTASAIRSSTYSY-PETPLYTQTASTSYYEAAGTATQVSTPATSQAVASSGSM--
1 ( 300) GGDASYTASAIRSSTYSY-PETPLYTQTASTSYYEAAGTATQVSTPATSQAVASSGSM--
2 ( 62) GSDTVYTNGAIRTTTYPY-TETQMYSQNTGGNYFDTQGSSAQVTTVVSSHSMVGTGGI--
3 ( 62) GSDTVYTNGAIRTTTYPY-TETQMYSQNTGGNYFDTQGSSAQVTTVVSSHSMVGTGGI--
4 ( 77) GGDAVYTNGAIRTA-YTYNPEPQMYAPSSTASYFEAPGGA-QVTVAASSPPAVPSHSMVG
5 ( 77) GGDAVYTNGAIRTA-YTYNPEPQMYAPSSTASYFEAPGGA-QVTVAASSPPAVPSHSMVG
//
*
0 ( 357) -PMYVSGSQVVASSASTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTGGGGSGAGTYVI
1 ( 357) -PMYVSGSQVVASSTSTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTGGGGSGAGTYVI
2 ( 119) -QMGVTGGQLISSS------------------GGTYLIGNSMENSGHSVTHTTRASPATI
3 ( 119) -QMGVTGGQLISSS------------------GGTYLIGNSMENSGHSVTHTTRASPATI
4 ( 135) ITMDVGGSPIVSS-----------------------------------------AGAYLI
5 ( 135) ITMDVGGSPIVSS-----AGAYLIHGGMDSTRH----------SLAHTSRSSPATLEMAI
//
0 ( 416) QGGYMLGSASQSYS-HTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEP
1 ( 416) QGGYMLGSASQSYS-HTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEP
2 ( 160) EMAIETLQKSDGLSTHRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDP
3 ( 160) EMAIETLQKSDGLSTHRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDP
4 ( 154) HGG--MDSTRHSLA-HTSRSSPATLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDP
5 ( 180) EN---LQKSEGITS-HKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDP
//
0 ( 475) VNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQHMAMRGQPF
1 ( 475) VNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQHMAMRGQPF
2 ( 220) VNAASFGKLIRSIFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPM
3 ( 220) VNAASFGKLIRSIFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPM
4 ( 211) VNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPM
5 ( 236) VNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPM
//
0 ( 535) SQKQRLKPIQKMEGMTNG-VAVGQQPSTGLSD-ISAQVQQYQQFLDASRSLPDFTELDLQ
1 ( 535) SQKQRLKPIQKMEGMTNG-VAVGQQPSTGLSD-ISAQVQQYQQFLDASRSLPDFTELDLQ
2 ( 280) QQKQRYKPMQKVDGVADGFTGSGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEIS
3 ( 280) QQKQRYKPMQKVDGVADGFTGSGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEIS
4 ( 271) HQKPRYRPAQKTDSLGDS-GSHSGLHSTPEQT-MAVQSQHHQQYIDVSHVFPEFPAPDLG
5 ( 296) HQKPRYRPAQKTDSLGDS-GSHSGLHSTPEQT-MAVQSQHHQQYIDVSHVFPEFPAPDLG
//
0 ( 593) GKVLPEGVGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLSQPSEAP--
1 ( 593) GKVLPEGVGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLSQPSEAP--
2 ( 340) S--LPDGTTFEDIKSLQSLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGT--
3 ( 340) S--LPDGTTFEDIKSLQSLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGT--
4 ( 329) SFLLQDGVTLHDVKALQLVYRRHCEATVDVVMNLQFHYIEKLWLSFWNSKASS-SDGPTS
5 ( 354) SFLLQDGVTLHDVKALQLVYRRHCEATVDVVMNLQFHYIEKLWLSFWNSKASS-SDGPTS
//
0 ( 651) -PLAVHD---EAEKRLPKAILVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIPSA
1 ( 651) -PLAVHD---EAEKRLPKAILVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIPSA
2 ( 396) -TITESSNLSEIESRLPKAKLITLCKHESILKWMCNCDHGMYQALVEILIPDVLRPIPSA
3 ( 396) -TITESSNLSEIESRLPKAKLITLCKHESILKWMCNCDHGMYQALVEILIPDVLRPIPSA
4 ( 388) LPASDED---PEGAVLPKDKLISLCQCDPILRWMRSCDHILYQALVEILIPDVLRPVPST
5 ( 413) LPASDED---PEGAVLPKDKLISLCQCDPILRWMRSCDHILYQALVEILIPDVLRPVPST
//
0 ( 707) LTQAIRNFAKSLESWLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAVLQ
1 ( 707) LTQAIRNFAKSLESWLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAVLQ
2 ( 455) LTQAIRNFAKSLEGWLSNAMNNIPQRMIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQ
3 ( 455) LTQAIRNFAKSLEGWLSNAMNNIPQRMIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQ
4 ( 445) LTQAIRNFAKSLEGWLTNAMSDFPQQVIQTKVGVVSAFAQTLRRYTSLNHLAQAARAVLQ
5 ( 470) LTQAIRNFAKSLEGWLTNAMSDFPQQVIQTKVGVVSAFAQTLRRYTSLNHLAQAARAVLQ
//
0 ( 767) NTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAWLD
1 ( 767) NTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAWLD
2 ( 515) NTSQINQMLSDLNRVDFANVQEQASWVCQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLD
3 ( 515) NTSQINQMLSDLNRVDFANVQEQASWVCQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLD
4 ( 505) NTSQINQMLSDLNRVDFANVQEQASWVCQCEESVVQRLEQDFKLTLQQQSSLDQWASWLD
5 ( 530) NTSQINQMLSDLNRVDFANVQEQASWVCQCEESVVQRLEQDFKLTLQQQSSLDQWASWLD
//
0 ( 827) GVVSQVLKPYQGSAGFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYM
1 ( 827) GVVSQVLKPYQGSAGFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYM
2 ( 575) NVMMQALKPYEGRPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYM
3 ( 575) NVMMQALKPYEGRPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYM
4 ( 565) SVVTQVLKQHAGSPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYM
5 ( 590) SVVTQVLKQHAGSPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYM
//
0 ( 887) YYLIEHRVAQAKGETPIAVMGEFANLAT-SLNPLDPDKDEEEEEEEESEDELPQDISLAA
1 ( 887) YYLIEHRVAQAKGETPIAVMGEFANLAT-SLNPLDPDKDEEEEEEEESEDELPQDISLAA
2 ( 635) FYLVEHRVAQATGETPIAVMGEFGDL-N-AVSPGNLDKDEGSEVESEMDEEL........
3 ( 635) FYLVEHRVAQATGETPIAVMGE......................................
4 ( 625) FYLVEHRVAEATGETPIAVMGEFNDLASLSLTLL--DKDDMGDEQRGSE----------A
5 ( 650) FYLVEHRVAEATGETPIAVMGEFNDLASLSLTLL--DKDDMGDEQRGSE----------A
//
0 ( 946) GGESPALGPETLEPPAKLARTDARGLFVQALPSS
1 ( 946) GGESPALGPETLEPPAKLARTDARGLFVQALPSS
2 ( -) ..................................
3 ( -) ..................................
4 ( 673) GPDARSLG----EPLVKRERSD............
5 ( 698) GPDARSLG----EPLVKRERSD............
//
