#  0    Query: pF1KE0099, 267 aa
#  1    CCDS8378.1 APOA1 gene_id:335|Hs108|chr11    (267 aa)

//
        exp       sw-scr    id%      from      to
   1    8.8e-66     1733  100.0         1     267

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   0  (    1)    MKAAVLTLAVLFLTGSQARHFWQQDEPPQSPWDRVKDLATVYVDVLKDSGRDYVSQFEGS
   1  (    1)    MKAAVLTLAVLFLTGSQARHFWQQDEPPQSPWDRVKDLATVYVDVLKDSGRDYVSQFEGS

//
                                                                             
   0  (   61)    ALGKQLNLKLLDNWDSVTSTFSKLREQLGPVTQEFWDNLEKETEGLRQEMSKDLEEVKAK
   1  (   61)    ALGKQLNLKLLDNWDSVTSTFSKLREQLGPVTQEFWDNLEKETEGLRQEMSKDLEEVKAK

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   0  (  121)    VQPYLDDFQKKWQEEMELYRQKVEPLRAELQEGARQKLHELQEKLSPLGEEMRDRARAHV
   1  (  121)    VQPYLDDFQKKWQEEMELYRQKVEPLRAELQEGARQKLHELQEKLSPLGEEMRDRARAHV

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   0  (  181)    DALRTHLAPYSDELRQRLAARLEALKENGGARLAEYHAKATEHLSTLSEKAKPALEDLRQ
   1  (  181)    DALRTHLAPYSDELRQRLAARLEALKENGGARLAEYHAKATEHLSTLSEKAKPALEDLRQ

//
                                            
   0  (  241)    GLLPVLESFKVSFLSALEEYTKKLNTQ
   1  (  241)    GLLPVLESFKVSFLSALEEYTKKLNTQ

//