Gene/Protein Characteristic Table for KIAA0003
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Product ID ORK01948
Accession No D13628
Description angiopoietin 1, transcript variant 1
Clone name hk04939
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (4211 bp)
Predicted protein sequence (524 aa)
Flexi ORF Clone FXC01948
Source Human adult brain
Rouge ID mKIAA0003 by Kazusa Mouse cDNA Project
Note We replaced ha00055, former representative clones for KIAA0003 with hk04939. (2001/5/29)
Features of the cloned cDNA sequence

Length: 4211 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning No warning
Integrity of 3' end
Length of 3'UTR 2363 bp
Genome contig ID gi51511724r_108230896
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 8 r 108330896 108579313 9 100.0 Perfect prediction
Features of the protein sequence

Length: 524 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q15389 1.5e-189 100.0 Angiopoietin-1;...
Homo sapiens
XP_001088871 3.3e-189 99.8 angiopoietin 1 ...
Macaca mulatta
BAB91325 2.2e-188 99.8 angiopoietin-1 ...
Homo sapiens
XP_001494996 1.1e-186 98.0 similar to Angi...
Equus caballus
O08538 2.2e-186 97.6 Angiopoietin-1;...
Mus musculus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR002181 310 522 PF00147 Fibrinogen
HMMSmart IPR002181 307 522 SM00186 Fibrinogen
ScanRegExp IPR002181 473 485 PS00514 Fibrinogen
Expression profile

Northern blot
Experimental conditions
PCR conditions test

RH mapping information

Chromosome No. 8
Experimental conditions
Panel name Genebridge 4
PCR product length 137 bp
PCR conditions 95 °C15 sec56 °C60 sec30 cycles
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