Gene/Protein Characteristic Table for KIAA0035
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Product ID ORK00378
Accession No D21262
Description nucleolar and coiled-body phosphoprotein 1, transcript variant 1
Clone name ha01976
Vector information
The cDNA fragment was inserted at the NotI-EcoRV site of the ...
cDNA sequence DNA sequence (3727 bp)
Predicted protein sequence (707 aa)
Flexi ORF Clone FXC00378
Source Myeloblast cell line (KG-1)
Rouge ID mKIAA0035 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence

Length: 3727 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 1601 bp
Genome contig ID gi89161187f_103802166
PolyA signal sequence
Flanking genome sequence
(111453 - 111502)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 10 f 103902162 103913617 13 99.3 Perfect prediction
Features of the protein sequence

Length: 707 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAA04803 2.1e-161 100.0 ORF [Homo sapiens].
Homo sapiens
BAG09575 2.1e-161 100.0 nucleolar phosp...
synthetic construct
EAW49716 8.3e-161 99.9 nucleolar and c...
Homo sapiens
XP_001170994 4.9e-158 98.3 similar to NOLC...
Pan troglodytes
XP_001112123 3.6e-150 94.1 similar to Nucl...
Macaca mulatta
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
BlastProDom NULL 630 707 PD015362 NULL
HMMPfam IPR007718 609 704 PF05022 SRP40
ProfileScan IPR006594 8 40 PS50896 LisH dimerisation motif
Expression profile

Northern blot
Experimental conditions
PCR conditions test

RH mapping information

Chromosome No. 10
Experimental conditions
Panel name Genebridge 4
PCR product length 161 bp
PCR conditions 95 °C15 sec52 °C60 sec30 cycles
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