Gene/Protein Characteristic Table for KIAA0095
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Product ID ORK00015
Accession No D42085
Description nucleoporin 93kDa, transcript variant 1
Clone name ha01471
Vector information
The cDNA fragment was inserted at the EcoRV-NotI site of the ...
cDNA sequence DNA sequence (2681 bp)
Predicted protein sequence (832 aa)
Flexi ORF Clone FXC00015
Source Myeloblast cell line (KG-1)
Rouge ID mKIAA0095 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence

Length: 2681 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning No warning
Integrity of 3' end
Length of 3'UTR 155 bp
Genome contig ID gi51511732f_55221573
PolyA signal sequence
Flanking genome sequence
(214606 - 214655)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 16 f 55321573 55436177 22 99.9 Perfect prediction
Features of the protein sequence

Length: 832 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
XP_510982 0 99.9 nucleoporin 93k...
Pan troglodytes
Q8N1F7 0 100.0 Nuclear pore co...
Homo sapiens
AAH34346 0 99.9 Nucleoporin 93k...
Homo sapiens
BAF84951 0 99.8 unnamed protein...
Homo sapiens
Q5R822 0 99.5 Nuclear pore co...
Pongo abelii
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR007231 244 518 PF04097 Nucleoporin interacting component
Expression profile

Northern blot
Experimental conditions
PCR conditions test

RH mapping information

Chromosome No. 16
Experimental conditions
Panel name Stanford G3
PCR product length 250 (3.0k) bp
PCR conditions 95 °C15 sec66 °C120 sec30 cycles
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