Gene/Protein Characteristic Table for KIAA0077
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Product ID ORK06520
Accession No D38521
Description proteasome (prosome, macropain) activator subunit 4
Clone name ha00919
Vector information
The cDNA fragment was inserted at the EcoRV-NotI site of the ...
cDNA sequence DNA sequence (6106 bp)
Predicted protein sequence (1798 aa)
Source Myeloblast cell line (KG-1)
Rouge ID mKIAA0077 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence

Length: 6106 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 708 bp
Genome contig ID gi89161199r_53845511
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 2 r 53945511 54051291 47 100.0 Perfect prediction
Features of the protein sequence

Length: 1798 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q14997 0 100.0 Proteasome acti...
Homo sapiens
XP_606554 0 97.4 proteasome (pro...
Bos taurus
EDL98046 0 96.0 rCG23342, isofo...
Rattus norvegicus
XP_001055468 0 96.0 similar to prot...
Rattus norvegicus
Q5SSW2 0 95.9 Proteasome acti...
Mus musculus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR000357 1133 1170 PF02985 HEAT
IPR000357 1309 1345 PF02985 HEAT
IPR000357 1635 1671 PF02985 HEAT
Expression profile

Northern blot
Experimental conditions
PCR conditions test

RH mapping information

Chromosome No. 2
Experimental conditions
Panel name Genebridge 4
PCR product length 129 bp
PCR conditions 95 °C15 sec62 °C60 sec30 cycles
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