Gene/Protein Characteristic Table for KIAA0104
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Product ID ORK01959
Accession No D14660
Description mitochondrial ribosomal protein L19
Clone name ha00685
Vector information
The cDNA fragment was inserted at the EcoRV-NotI site of the ...
cDNA sequence DNA sequence (1322 bp)
Predicted protein sequence (291 aa)
Flexi ORF Clone FXC01959
Source Myeloblast cell line (KG-1)
Features of the cloned cDNA sequence

Length: 1322 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 445 bp
Genome contig ID gi89161199f_75627444
PolyA signal sequence
Flanking genome sequence
(108922 - 108971)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 2 f 75727444 75736364 6 100.0 Perfect prediction
Features of the protein sequence

Length: 291 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
P49406 6.8e-113 100.0 39S ribosomal p...
Homo sapiens
XP_515568 1.2e-112 99.7 mitochondrial r...
Pan troglodytes
Q5R8M4 6.8e-107 96.2 39S ribosomal p...
Pongo abelii
XP_001112069 7.9e-105 93.5 mitochondrial r...
Macaca mulatta
XP_001498647 4.6e-93 84.2 similar to Mito...
Equus caballus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
BlastProDom IPR001857 108 191 PD002979 Ribosomal protein L19
FPrintScan IPR001857 123 152 PR00061 Ribosomal protein L19
IPR001857 153 176 PR00061 Ribosomal protein L19
Expression profile

Northern blot
Experimental conditions
PCR conditions test

RH mapping information

Chromosome No. 2
Experimental conditions
Panel name Stanford G3
PCR product length 129 (0.3k) bp
PCR conditions 95 °C15 sec62 °C120 sec30 cycles
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