BP052051 ( SPDL001e06_f )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP052051  SPDL001e06_f
         (485 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_Q2MGQ5 RNA polymerase, dimerisation n=1 Tax=Medicago t...   143   5e-33
UniRef100_A7P9N6 Chromosome chr3 scaffold_8, whole genome shotgu...   139   7e-32
UniRef100_A5B429 Putative uncharacterized protein n=1 Tax=Vitis ...   139   7e-32
UniRef100_B9RYB6 DNA-directed RNA polymerase II subunit, putativ...   137   3e-31
UniRef100_Q8LAJ1 DNA-directed RNA polymerase II, third largest s...   135   1e-30
UniRef100_Q39211 DNA-directed RNA polymerase II subunit RPB3-A n...   135   1e-30
UniRef100_B9HS44 Predicted protein n=1 Tax=Populus trichocarpa R...   130   5e-29
UniRef100_A9SHD1 Predicted protein n=1 Tax=Physcomitrella patens...   128   2e-28
UniRef100_Q39212 DNA-directed RNA polymerase II subunit RPB3-B n...   128   2e-28
UniRef100_B9GHC8 Predicted protein (Fragment) n=1 Tax=Populus tr...   109   1e-22
UniRef100_Q6YX88 Os09g0110400 protein n=2 Tax=Oryza sativa RepID...   107   5e-22
UniRef100_B6TCC3 DNA-directed RNA polymerase II 36 kDa polypepti...   104   3e-21
UniRef100_C5X7D7 Putative uncharacterized protein Sb02g014460 n=...   103   6e-21
UniRef100_C1MVZ5 Predicted protein n=1 Tax=Micromonas pusilla CC...    70   6e-11
UniRef100_C1EBY2 Dna-directed RNA polymerase II polypeptide a n=...    68   4e-10
UniRef100_A4RSP9 DNA-directed RNA polymerase II subunit 3 n=1 Ta...    62   3e-08
UniRef100_Q01F02 Rpb3 DNA-directed RNA polymerase II subunit 3 (...    59   1e-07
UniRef100_Q54DH7 DNA-directed RNA polymerase II subunit rpb3 n=1...    57   6e-07
UniRef100_A9SM40 Predicted protein n=1 Tax=Physcomitrella patens...    55   2e-06
graphical overview:
alignment
UniRef100_Q2MGQ5 UniRef100_Q2MGQ5 UniRef100_A7P9N6 UniRef100_A7P9N6 UniRef100_A5B429 UniRef100_A5B429 UniRef100_B9RYB6 UniRef100_B9RYB6 UniRef100_Q8LAJ1 UniRef100_Q8LAJ1 UniRef100_Q39211 UniRef100_Q39211 UniRef100_B9HS44 UniRef100_B9HS44 UniRef100_A9SHD1 UniRef100_A9SHD1 UniRef100_Q39212 UniRef100_Q39212 UniRef100_B9GHC8 UniRef100_B9GHC8 UniRef100_Q6YX88 UniRef100_Q6YX88 UniRef100_B6TCC3 UniRef100_B6TCC3 UniRef100_C5X7D7 UniRef100_C5X7D7 UniRef100_C1MVZ5 UniRef100_C1MVZ5 UniRef100_C1EBY2 UniRef100_C1EBY2 UniRef100_A4RSP9 UniRef100_A4RSP9 UniRef100_Q01F02 UniRef100_Q01F02 UniRef100_Q54DH7 UniRef100_Q54DH7