BP038415 ( MFB061b12_f )

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BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP038415  MFB061b12_f
         (467 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_Q2MGQ5 RNA polymerase, dimerisation n=1 Tax=Medicago t...   172   1e-41
UniRef100_A7P9N6 Chromosome chr3 scaffold_8, whole genome shotgu...   171   3e-41
UniRef100_A5B429 Putative uncharacterized protein n=1 Tax=Vitis ...   171   3e-41
UniRef100_B9RYB6 DNA-directed RNA polymerase II subunit, putativ...   168   2e-40
UniRef100_Q8LAJ1 DNA-directed RNA polymerase II, third largest s...   157   3e-37
UniRef100_B9HS44 Predicted protein n=1 Tax=Populus trichocarpa R...   157   3e-37
UniRef100_Q39211 DNA-directed RNA polymerase II subunit RPB3-A n...   157   3e-37
UniRef100_A9SHD1 Predicted protein n=1 Tax=Physcomitrella patens...   151   2e-35
UniRef100_Q39212 DNA-directed RNA polymerase II subunit RPB3-B n...   150   5e-35
UniRef100_Q6YX88 Os09g0110400 protein n=2 Tax=Oryza sativa RepID...   138   2e-31
UniRef100_B6TCC3 DNA-directed RNA polymerase II 36 kDa polypepti...   125   1e-27
UniRef100_C5X7D7 Putative uncharacterized protein Sb02g014460 n=...   123   7e-27
UniRef100_B9GHC8 Predicted protein (Fragment) n=1 Tax=Populus tr...   118   2e-25
UniRef100_C1EBY2 Dna-directed RNA polymerase II polypeptide a n=...    88   3e-16
UniRef100_C1MVZ5 Predicted protein n=1 Tax=Micromonas pusilla CC...    85   2e-15
UniRef100_A4RSP9 DNA-directed RNA polymerase II subunit 3 n=1 Ta...    76   1e-12
UniRef100_Q01F02 Rpb3 DNA-directed RNA polymerase II subunit 3 (...    70   7e-11
UniRef100_Q54DH7 DNA-directed RNA polymerase II subunit rpb3 n=1...    69   2e-10
UniRef100_A9SM40 Predicted protein n=1 Tax=Physcomitrella patens...    64   4e-09
UniRef100_A0DID7 Chromosome undetermined scaffold_51, whole geno...    63   1e-08
UniRef100_A0CLS1 Chromosome undetermined scaffold_204, whole gen...    63   1e-08
UniRef100_P16925 Conjugation stage-specific protein n=2 Tax=Tetr...    60   7e-08
UniRef100_A8ICX5 DNA-directed RNA polymerase II, 36 kDa polypept...    55   3e-06
UniRef100_B6AC64 DNA-directed RNA polymerases I and III subunit ...    54   5e-06
graphical overview:
alignment
UniRef100_Q2MGQ5 UniRef100_Q2MGQ5 UniRef100_A7P9N6 UniRef100_A7P9N6 UniRef100_A5B429 UniRef100_A5B429 UniRef100_B9RYB6 UniRef100_B9RYB6 UniRef100_Q8LAJ1 UniRef100_Q8LAJ1 UniRef100_B9HS44 UniRef100_B9HS44 UniRef100_Q39211 UniRef100_Q39211 UniRef100_A9SHD1 UniRef100_A9SHD1 UniRef100_Q39212 UniRef100_Q39212 UniRef100_Q6YX88 UniRef100_Q6YX88 UniRef100_B6TCC3 UniRef100_B6TCC3 UniRef100_C5X7D7 UniRef100_C5X7D7 UniRef100_B9GHC8 UniRef100_B9GHC8 UniRef100_C1EBY2 UniRef100_C1EBY2 UniRef100_C1MVZ5 UniRef100_C1MVZ5 UniRef100_A4RSP9 UniRef100_A4RSP9 UniRef100_Q01F02 UniRef100_Q01F02 UniRef100_Q54DH7 UniRef100_Q54DH7 UniRef100_A9SM40 UniRef100_A9SM40 UniRef100_A0DID7 UniRef100_A0DID7 UniRef100_A0CLS1 UniRef100_A0CLS1 UniRef100_P16925 UniRef100_P16925 UniRef100_A8ICX5 UniRef100_A8ICX5